version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3030 67.60 0 3391142..3391894 + 250 91977512 - RPD_3044 - glycerophosphoryl diester phosphodiesterase 3031 64.97 0 3391988..3393223 + 411 91977513 - RPD_3045 - hypothetical protein 3032 65.73 0 3393272..3393700 + 142 91977514 - RPD_3046 - histidine triad (HIT) protein 3033 66.23 0 3393710..3394171 - 153 91977515 - RPD_3047 - hypothetical protein 3034 68.99 +1 3394251..3394595 - 114 91977516 - RPD_3048 - hypothetical protein 3035 67.21 0 3394592..3395332 - 246 91977517 - RPD_3049 - AzlC-like 3036 62.50 0 3395483..3395842 + 119 91977518 - RPD_3050 - type IV pilus assembly PilZ 3037 68.49 +1 3395860..3396903 - 347 91977519 - RPD_3051 - lytic transglycosylase, catalytic 3038 68.70 +1 3396994..3397926 + 310 91977520 - RPD_3052 - hypothetical protein 3039 64.93 0 3398035..3398379 + 114 91977521 - RPD_3053 - type IV pilus assembly PilZ 3040 68.68 +1 3398496..3400430 + 644 91977522 - RPD_3054 - glycosyltransferase 3041 63.76 0 3400601..3403006 - 801 91977523 - RPD_3055 - ATPase AAA-2 3042 57.27 -2 3403204..3403533 - 109 91977524 - RPD_3056 - ATP-dependent Clp protease adaptor protein ClpS 3043 60.43 -1 3403994..3405388 + 464 91977525 - RPD_3057 - hypothetical protein 3044 67.24 0 3405827..3407563 + 578 91977526 - RPD_3058 - Serine-type D-Ala-D-Ala carboxypeptidase 3045 66.26 0 3407808..3408536 - 242 91977527 - RPD_3059 - heat shock protein DnaJ-like 3046 70.85 +1 3408680..3409420 - 246 91977528 - RPD_3060 - hypothetical protein 3047 61.96 0 3409513..3410340 - 275 91977529 - RPD_3061 - hypothetical protein 3048 65.48 0 3410610..3411533 - 307 91977530 - RPD_3062 - putative chromosome partitioning protein ParA 3049 68.31 0 3411762..3412613 + 283 91977531 - RPD_3063 - pantoate--beta-alanine ligase 3050 65.52 0 3412663..3413097 - 144 91977532 - RPD_3064 - hypothetical protein 3051 66.03 0 3413122..3415482 - 786 91977533 - RPD_3065 - TonB-dependent receptor 3052 62.52 0 3415841..3416563 + 240 91977534 - RPD_3066 - cyclic nucleotide-binding 3053 67.12 0 3416692..3417129 - 145 91977535 - RPD_3067 - hypothetical protein 3054 70.79 +1 3417166..3418209 - 347 91977536 - RPD_3068 - hypothetical protein 3055 56.89 -2 3418375..3418599 - 74 91977537 - RPD_3069 - hypothetical protein 3056 63.77 0 3418775..3419431 - 218 91977538 - RPD_3070 - glutathione S-transferase-like 3057 67.75 0 3419646..3419921 + 91 91977539 - RPD_3071 - hypothetical protein 3058 68.30 0 3419990..3420784 - 264 91977540 - RPD_3072 - hypothetical protein 3059 65.20 0 3420861..3421679 - 272 91977541 - RPD_3073 - 2,5-didehydrogluconate reductase 3060 67.93 0 3421760..3422155 - 131 91977542 - RPD_3074 - helix-turn-helix type 3 3061 66.60 0 3422137..3423558 - 473 91977543 - RPD_3075 - magnesium transporter 3062 65.29 0 3423721..3424518 + 265 91977544 - RPD_3076 - polysaccharide deacetylase 3063 69.61 +1 3424636..3425958 + 440 91977545 - RPD_3077 - polysaccharide deacetylase 3064 66.26 0 3426110..3426352 + 80 91977546 - RPD_3078 - prevent-host-death protein 3065 63.72 0 3426357..3426797 + 146 91977547 - RPD_3079 - PilT protein-like 3066 58.03 -2 3426884..3427300 + 138 91977548 - RPD_3080 - hypothetical protein 3067 59.37 -1 3427458..3427868 + 136 91977549 - RPD_3081 - hypothetical protein 3068 58.44 -1 3428129..3428371 - 80 91977550 - RPD_3082 - hypothetical protein 3069 68.36 0 3428436..3429203 + 255 91977551 lipB RPD_3083 - lipoyltransferase 3070 66.98 0 3429200..3429523 + 107 91977552 - RPD_3084 - hypothetical protein 3071 67.71 0 3429775..3430446 + 223 91977553 - RPD_3085 - regulatory protein, TetR 3072 64.29 0 3430443..3431369 + 308 91977554 - RPD_3086 - cation diffusion facilitator family transporter 3073 65.92 0 3431386..3433929 - 847 91977555 - RPD_3087 - ATP-binding region, ATPase-like 3074 64.09 0 3434257..3434799 - 180 91977556 - RPD_3088 - cytochrome B561 3075 62.86 0 3434869..3435315 - 148 91977557 - RPD_3089 - hypothetical protein 3076 63.17 0 3435312..3435854 - 180 91977558 - RPD_3090 - MarR family transcriptional regulator 3077 68.33 0 3436090..3436389 - 99 91977559 - RPD_3091 - acylphosphatase 3078 70.57 +1 3436386..3437255 - 289 91977560 - RPD_3092 - hypothetical protein 3079 66.71 0 3437262..3439337 - 691 91977561 - RPD_3093 - carbamoyl-phosphate synthase L chain, ATP-binding 3080 67.22 0 3439526..3439705 + 59 91977562 - RPD_3094 - hypothetical protein 3081 66.67 0 3439876..3440298 + 140 91977563 - RPD_3095 - hypothetical protein 3082 66.67 0 3440361..3440972 - 203 91977564 - RPD_3096 - hypothetical protein 3083 60.65 -1 3441283..3441681 - 132 91977565 - RPD_3097 - hypothetical protein 3084 68.17 0 3441798..3443261 + 487 91977566 - RPD_3098 - deoxyribodipyrimidine photolyase 3085 59.65 -1 3443353..3443751 + 132 91977567 - RPD_3099 - hypothetical protein 3086 67.01 0 3444830..3445705 - 291 91977568 - RPD_3100 - hypothetical protein 3087 60.40 -1 3445792..3446238 - 148 91977569 - RPD_3101 - hypothetical protein 3088 66.47 0 3446710..3447702 - 330 91977570 - RPD_3102 - helix-turn-helix, AraC type 3089 65.42 0 3447856..3449544 + 562 91977571 - RPD_3103 - AMP-dependent synthetase and ligase 3090 69.15 +1 3449580..3450344 + 254 91977572 - RPD_3104 - short-chain dehydrogenase/reductase SDR 3091 68.52 +1 3450390..3451577 + 395 91977573 - RPD_3105 - Acetyl-CoA C-acetyltransferase 3092 65.69 0 3451593..3452720 + 375 91977574 - RPD_3106 - acyl-CoA dehydrogenase-like 3093 62.47 0 3453404..3455428 + 674 91977575 - RPD_3107 - chemotaxis sensory transducer 3094 63.82 0 3455611..3455961 + 116 91977576 - RPD_3108 - hypothetical protein 3095 66.04 0 3455982..3458687 - 901 91977577 - RPD_3109 - multi-sensor signal transduction histidine kinase 3096 64.56 0 3458902..3461082 - 726 91977578 - RPD_3110 - Pyrrolo-quinoline quinone 3097 63.65 0 3461238..3462032 - 264 91977579 - RPD_3111 - NUDIX hydrolase 3098 66.14 0 3462037..3462990 - 317 91977580 - RPD_3112 - dihydrodipicolinate synthetase 3099 64.92 0 3463159..3464019 - 286 91977581 - RPD_3113 - MaoC-like dehydratase 3100 60.05 -1 3464204..3464596 - 130 91977582 - RPD_3114 - hypothetical protein 3101 65.80 0 3464596..3465744 - 382 91977583 - RPD_3115 - acetyl-CoA acetyltransferase 3102 64.95 0 3465948..3469433 - 1161 162138287 - RPD_3116 - indolepyruvate ferredoxin oxidoreductase 3103 67.59 0 3469758..3470189 + 143 91977585 - RPD_3117 - hypothetical protein 3104 71.68 +1 3470425..3470703 + 92 91977586 - RPD_3118 - hypothetical protein 3105 62.59 0 3470791..3471600 - 269 91977587 - RPD_3119 - hypothetical protein 3106 61.88 0 3471767..3472309 - 180 91977588 - RPD_3120 - hypothetical protein 3107 66.57 0 3472459..3473514 - 351 91977589 - RPD_3121 - hypothetical protein 3108 64.45 0 3473803..3475335 - 510 91977590 - RPD_3122 - carboxyl transferase 3109 67.30 0 3475580..3476056 + 158 91977591 - RPD_3123 - hypothetical protein 3110 64.46 0 3476063..3476878 - 271 91977592 - RPD_3124 - Beta-lactamase 3111 62.55 0 3476945..3477211 - 88 91977593 - RPD_3125 - type III secretion proteins, related to flagellar biosynthesis protein FlhB 3112 70.93 +1 3477208..3478989 - 593 91977594 - RPD_3126 - hypothetical protein 3113 67.30 0 3479049..3479834 - 261 91977595 - RPD_3127 - ATP12 ATPase 3114 70.93 +1 3479907..3480281 - 124 91977596 - RPD_3128 - hypothetical protein 3115 68.91 +1 3480278..3481612 - 444 91977597 - RPD_3129 - pseudouridine synthase RluD 3116 61.82 0 3482974..3483510 - 178 91977598 - RPD_3130 - transposase and inactivated derivatives 3117 65.07 0 3483691..3484443 - 250 91977599 - RPD_3131 - ABC transporter related 3118 64.46 0 3484440..3485210 - 256 91977600 - RPD_3132 - ABC transporter related 3119 64.24 0 3485207..3486442 - 411 91977601 - RPD_3133 - inner-membrane translocator 3120 62.60 0 3486447..3487454 - 335 91977602 - RPD_3134 - inner-membrane translocator 3121 63.86 0 3487683..3489035 - 450 91977603 - RPD_3135 - twin-arginine translocation pathway signal 3122 58.22 -1 3489408..3489845 - 145 91977604 - RPD_3136 - histidine triad (HIT) protein 3123 61.96 0 3490783..3491037 + 84 91977605 - RPD_3137 - plasmid stabilization protein 3124 66.67 0 3491051..3491473 + 140 91977606 - RPD_3138 - PilT protein-like 3125 63.67 0 3491916..3494954 - 1012 91977607 - RPD_3139 - acriflavin resistance protein 3126 65.10 0 3494954..3496036 - 360 91977608 - RPD_3140 - secretion protein HlyD 3127 58.13 -1 3496142..3496621 + 159 91977609 - RPD_3141 - redox-sensitive transcriptional activator SoxR 3128 60.34 -1 3496702..3497049 - 115 91977610 - RPD_3142 - helix-turn-helix, HxlR type 3129 61.42 -1 3497123..3497503 + 126 91977611 - RPD_3143 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0