version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2987 60.93 -1 3342311..3342589 + 92 91977469 - RPD_3001 - hypothetical protein 2988 62.88 0 3342670..3343302 - 210 91977470 - RPD_3002 - phage tail Collar 2989 66.92 0 3343763..3348850 + 1695 91977471 - RPD_3003 - Outer membrane autotransporter barrel 2990 67.30 0 3348891..3350156 - 421 91977472 - RPD_3004 - major facilitator transporter 2991 65.22 0 3350153..3351535 - 460 91977473 engA RPD_3005 - GTP-binding protein EngA 2992 69.63 +1 3351609..3352148 - 179 91977474 - RPD_3006 - hypothetical protein 2993 64.22 0 3352203..3352856 - 217 91977475 - RPD_3007 - hypothetical protein 2994 66.79 0 3353018..3353842 - 274 91977476 panB RPD_3008 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2995 63.93 0 3353846..3354430 - 194 91977477 - RPD_3009 - NnrU 2996 67.16 0 3354571..3355575 + 334 91977478 - RPD_3010 - twin-arginine translocation pathway signal 2997 62.19 0 3355642..3356088 - 148 91977479 - RPD_3011 - hypothetical protein 2998 64.87 0 3356225..3356503 - 92 91977480 - RPD_3012 - hypothetical protein 2999 53.11 -2 3357197..3357373 - 58 91977481 - RPD_3013 - hypothetical protein 3000 61.82 0 3357832..3359316 - 494 91977482 gatB RPD_3014 - aspartyl/glutamyl-tRNA amidotransferase subunit B 3001 63.58 0 3359446..3360546 - 366 91977483 - RPD_3015 - histidine kinase, dimerisation/phosphoacceptor 3002 66.60 0 3360632..3362110 - 492 91977484 gatA RPD_3016 - aspartyl/glutamyl-tRNA amidotransferase subunit A 3003 62.32 0 3362250..3362456 - 68 91977485 - RPD_3017 - hypothetical protein 3004 63.89 0 3362534..3362821 - 95 91977486 gatC RPD_3018 - aspartyl/glutamyl-tRNA amidotransferase subunit C 3005 68.71 +1 3362909..3363985 - 358 91977487 - RPD_3019 - 2-nitropropane dioxygenase, NPD 3006 62.50 0 3364326..3365261 + 311 91977488 - RPD_3020 - putative cyclase 3007 64.40 0 3365300..3365917 - 205 91977489 - RPD_3021 - regulatory protein, TetR 3008 61.58 0 3365987..3367972 - 661 91977490 - RPD_3022 - 67 kDa myosin-cross-reactive antigen like 3009 67.91 0 3368197..3368679 + 160 91977491 - RPD_3023 - Holliday junction resolvase YqgF 3010 63.57 0 3368726..3369112 + 128 91977492 - RPD_3024 - SEC-C protein 3011 66.73 0 3369205..3370860 - 551 91977493 - RPD_3025 - acyl-CoA dehydrogenase-like 3012 65.83 0 3370980..3371696 - 238 91977494 - RPD_3026 - peptidase M15D, vanX D-ala-D-ala dipeptidase 3013 66.30 0 3371750..3373381 - 543 91977495 - RPD_3027 - thiamine pyrophosphate enzyme-like TPP binding region 3014 65.93 0 3373564..3374517 + 317 91977496 pyrB RPD_3028 - aspartate carbamoyltransferase catalytic subunit 3015 67.59 0 3374537..3375838 + 433 91977497 - RPD_3029 - dihydroorotase 3016 65.48 0 3375858..3376448 + 196 91977498 - RPD_3030 - putative glycerol-3-phosphate acyltransferase PlsY 3017 69.74 +1 3376534..3377802 + 422 91977499 - RPD_3031 - DNA processing protein DprA, putative 3018 64.29 0 3378375..3378584 - 69 91977500 - RPD_3032 - hypothetical protein 3019 65.87 0 3378832..3381576 + 914 91977501 - RPD_3033 - DNA topoisomerase I 3020 67.05 0 3381579..3383924 + 781 91977502 - RPD_3034 - ribonuclease R 3021 61.57 0 3383921..3384352 + 143 91977503 - RPD_3035 - hypothetical protein 3022 66.40 0 3384458..3385213 + 251 91977504 - RPD_3036 - NUDIX hydrolase 3023 54.17 -2 3385444..3385611 + 55 91977505 rpmG RPD_3037 - 50S ribosomal protein L33 3024 65.79 0 3385864..3387237 - 457 91977506 pleD RPD_3038 - response regulator PleD 3025 57.65 -2 3387247..3387612 - 121 91977507 - RPD_3039 - response regulator receiver 3026 64.00 0 3387755..3388054 + 99 91977508 - RPD_3040 - hypothetical protein 3027 67.21 0 3388051..3389340 + 429 91977509 - RPD_3041 - DNA polymerase IV 3028 63.38 0 3389501..3390322 - 273 91977510 - RPD_3042 - hypothetical protein 3029 67.09 0 3390659..3391126 + 155 91977511 - RPD_3043 - endoribonuclease L-PSP 3030 67.60 0 3391142..3391894 + 250 91977512 - RPD_3044 - glycerophosphoryl diester phosphodiesterase 3031 64.97 0 3391988..3393223 + 411 91977513 - RPD_3045 - hypothetical protein 3032 65.73 0 3393272..3393700 + 142 91977514 - RPD_3046 - histidine triad (HIT) protein 3033 66.23 0 3393710..3394171 - 153 91977515 - RPD_3047 - hypothetical protein 3034 68.99 +1 3394251..3394595 - 114 91977516 - RPD_3048 - hypothetical protein 3035 67.21 0 3394592..3395332 - 246 91977517 - RPD_3049 - AzlC-like 3036 62.50 0 3395483..3395842 + 119 91977518 - RPD_3050 - type IV pilus assembly PilZ 3037 68.49 +1 3395860..3396903 - 347 91977519 - RPD_3051 - lytic transglycosylase, catalytic 3038 68.70 +1 3396994..3397926 + 310 91977520 - RPD_3052 - hypothetical protein 3039 64.93 0 3398035..3398379 + 114 91977521 - RPD_3053 - type IV pilus assembly PilZ 3040 68.68 +1 3398496..3400430 + 644 91977522 - RPD_3054 - glycosyltransferase 3041 63.76 0 3400601..3403006 - 801 91977523 - RPD_3055 - ATPase AAA-2 3042 57.27 -2 3403204..3403533 - 109 91977524 - RPD_3056 - ATP-dependent Clp protease adaptor protein ClpS 3043 60.43 -1 3403994..3405388 + 464 91977525 - RPD_3057 - hypothetical protein 3044 67.24 0 3405827..3407563 + 578 91977526 - RPD_3058 - Serine-type D-Ala-D-Ala carboxypeptidase 3045 66.26 0 3407808..3408536 - 242 91977527 - RPD_3059 - heat shock protein DnaJ-like 3046 70.85 +1 3408680..3409420 - 246 91977528 - RPD_3060 - hypothetical protein 3047 61.96 0 3409513..3410340 - 275 91977529 - RPD_3061 - hypothetical protein 3048 65.48 0 3410610..3411533 - 307 91977530 - RPD_3062 - putative chromosome partitioning protein ParA 3049 68.31 0 3411762..3412613 + 283 91977531 - RPD_3063 - pantoate--beta-alanine ligase 3050 65.52 0 3412663..3413097 - 144 91977532 - RPD_3064 - hypothetical protein 3051 66.03 0 3413122..3415482 - 786 91977533 - RPD_3065 - TonB-dependent receptor 3052 62.52 0 3415841..3416563 + 240 91977534 - RPD_3066 - cyclic nucleotide-binding 3053 67.12 0 3416692..3417129 - 145 91977535 - RPD_3067 - hypothetical protein 3054 70.79 +1 3417166..3418209 - 347 91977536 - RPD_3068 - hypothetical protein 3055 56.89 -2 3418375..3418599 - 74 91977537 - RPD_3069 - hypothetical protein 3056 63.77 0 3418775..3419431 - 218 91977538 - RPD_3070 - glutathione S-transferase-like 3057 67.75 0 3419646..3419921 + 91 91977539 - RPD_3071 - hypothetical protein 3058 68.30 0 3419990..3420784 - 264 91977540 - RPD_3072 - hypothetical protein 3059 65.20 0 3420861..3421679 - 272 91977541 - RPD_3073 - 2,5-didehydrogluconate reductase 3060 67.93 0 3421760..3422155 - 131 91977542 - RPD_3074 - helix-turn-helix type 3 3061 66.60 0 3422137..3423558 - 473 91977543 - RPD_3075 - magnesium transporter 3062 65.29 0 3423721..3424518 + 265 91977544 - RPD_3076 - polysaccharide deacetylase 3063 69.61 +1 3424636..3425958 + 440 91977545 - RPD_3077 - polysaccharide deacetylase 3064 66.26 0 3426110..3426352 + 80 91977546 - RPD_3078 - prevent-host-death protein 3065 63.72 0 3426357..3426797 + 146 91977547 - RPD_3079 - PilT protein-like 3066 58.03 -2 3426884..3427300 + 138 91977548 - RPD_3080 - hypothetical protein 3067 59.37 -1 3427458..3427868 + 136 91977549 - RPD_3081 - hypothetical protein 3068 58.44 -1 3428129..3428371 - 80 91977550 - RPD_3082 - hypothetical protein 3069 68.36 0 3428436..3429203 + 255 91977551 lipB RPD_3083 - lipoyltransferase 3070 66.98 0 3429200..3429523 + 107 91977552 - RPD_3084 - hypothetical protein 3071 67.71 0 3429775..3430446 + 223 91977553 - RPD_3085 - regulatory protein, TetR 3072 64.29 0 3430443..3431369 + 308 91977554 - RPD_3086 - cation diffusion facilitator family transporter 3073 65.92 0 3431386..3433929 - 847 91977555 - RPD_3087 - ATP-binding region, ATPase-like 3074 64.09 0 3434257..3434799 - 180 91977556 - RPD_3088 - cytochrome B561 3075 62.86 0 3434869..3435315 - 148 91977557 - RPD_3089 - hypothetical protein 3076 63.17 0 3435312..3435854 - 180 91977558 - RPD_3090 - MarR family transcriptional regulator 3077 68.33 0 3436090..3436389 - 99 91977559 - RPD_3091 - acylphosphatase 3078 70.57 +1 3436386..3437255 - 289 91977560 - RPD_3092 - hypothetical protein 3079 66.71 0 3437262..3439337 - 691 91977561 - RPD_3093 - carbamoyl-phosphate synthase L chain, ATP-binding 3080 67.22 0 3439526..3439705 + 59 91977562 - RPD_3094 - hypothetical protein 3081 66.67 0 3439876..3440298 + 140 91977563 - RPD_3095 - hypothetical protein 3082 66.67 0 3440361..3440972 - 203 91977564 - RPD_3096 - hypothetical protein 3083 60.65 -1 3441283..3441681 - 132 91977565 - RPD_3097 - hypothetical protein 3084 68.17 0 3441798..3443261 + 487 91977566 - RPD_3098 - deoxyribodipyrimidine photolyase 3085 59.65 -1 3443353..3443751 + 132 91977567 - RPD_3099 - hypothetical protein 3086 67.01 0 3444830..3445705 - 291 91977568 - RPD_3100 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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