version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2965 65.85 0 3318794..3319531 - 245 91977447 - RPD_2979 - 3-oxoacyl-(acyl-carrier-protein) reductase 2966 62.21 0 3319712..3321124 + 470 91977448 - RPD_2980 - ethanolamine permease 2967 64.44 0 3321148..3322542 + 464 91977449 - RPD_2981 - ethanolamine ammonia lyase large subunit 2968 68.50 +1 3322539..3323354 + 271 91977450 - RPD_2982 - ethanolamine ammonia-lyase small subunit 2969 70.44 +1 3323479..3324432 - 317 91977451 - RPD_2983 - malonyl CoA-acyl carrier protein transacylase 2970 64.94 0 3324546..3325997 + 483 91977452 - RPD_2984 - GGDEF domain-containing protein 2971 64.39 0 3326284..3326766 + 160 91977453 rpsF RPD_2985 - 30S ribosomal protein S6 2972 63.75 0 3326772..3327011 + 79 91977454 rpsR RPD_2986 - 30S ribosomal protein S18 2973 67.62 0 3327142..3328089 + 315 91977455 - RPD_2987 - hypothetical protein 2974 65.47 0 3328125..3328709 + 194 91977456 rplI RPD_2988 - 50S ribosomal protein L9 2975 70.14 +1 3328784..3329905 - 373 91977457 - RPD_2989 - hypothetical protein 2976 62.19 0 3330275..3330475 - 66 91977458 - RPD_2990 - hypothetical protein 2977 62.99 0 3330985..3332481 + 498 91977459 - RPD_2991 - replicative DNA helicase 2978 68.86 +1 3332532..3333761 + 409 91977460 - RPD_2992 - alanine racemase 2979 61.18 -1 3333793..3334047 - 84 91977461 - RPD_2993 - hypothetical protein 2980 64.85 0 3334063..3335274 - 403 91977462 - RPD_2994 - hypothetical protein 2981 68.62 +1 3335356..3336843 + 495 91977463 - RPD_2995 - DNA repair protein RadA 2982 60.35 -1 3337057..3337689 + 210 91977464 - RPD_2996 - colicin V production protein 2983 64.66 0 3337713..3339257 + 514 91977465 - RPD_2997 - amidophosphoribosyltransferase 2984 66.40 0 3339430..3340173 + 247 91977466 - RPD_2998 - short-chain dehydrogenase/reductase SDR 2985 62.67 0 3340256..3341482 + 408 91977467 - RPD_2999 - putative urea/short-chain binding protein of ABC transporter 2986 61.45 -1 3341569..3341913 - 114 91977468 - RPD_3000 - GCN5-related N-acetyltransferase 2987 60.93 -1 3342311..3342589 + 92 91977469 - RPD_3001 - hypothetical protein 2988 62.88 0 3342670..3343302 - 210 91977470 - RPD_3002 - phage tail Collar 2989 66.92 0 3343763..3348850 + 1695 91977471 - RPD_3003 - Outer membrane autotransporter barrel 2990 67.30 0 3348891..3350156 - 421 91977472 - RPD_3004 - major facilitator transporter 2991 65.22 0 3350153..3351535 - 460 91977473 engA RPD_3005 - GTP-binding protein EngA 2992 69.63 +1 3351609..3352148 - 179 91977474 - RPD_3006 - hypothetical protein 2993 64.22 0 3352203..3352856 - 217 91977475 - RPD_3007 - hypothetical protein 2994 66.79 0 3353018..3353842 - 274 91977476 panB RPD_3008 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2995 63.93 0 3353846..3354430 - 194 91977477 - RPD_3009 - NnrU 2996 67.16 0 3354571..3355575 + 334 91977478 - RPD_3010 - twin-arginine translocation pathway signal 2997 62.19 0 3355642..3356088 - 148 91977479 - RPD_3011 - hypothetical protein 2998 64.87 0 3356225..3356503 - 92 91977480 - RPD_3012 - hypothetical protein 2999 53.11 -2 3357197..3357373 - 58 91977481 - RPD_3013 - hypothetical protein 3000 61.82 0 3357832..3359316 - 494 91977482 gatB RPD_3014 - aspartyl/glutamyl-tRNA amidotransferase subunit B 3001 63.58 0 3359446..3360546 - 366 91977483 - RPD_3015 - histidine kinase, dimerisation/phosphoacceptor 3002 66.60 0 3360632..3362110 - 492 91977484 gatA RPD_3016 - aspartyl/glutamyl-tRNA amidotransferase subunit A 3003 62.32 0 3362250..3362456 - 68 91977485 - RPD_3017 - hypothetical protein 3004 63.89 0 3362534..3362821 - 95 91977486 gatC RPD_3018 - aspartyl/glutamyl-tRNA amidotransferase subunit C 3005 68.71 +1 3362909..3363985 - 358 91977487 - RPD_3019 - 2-nitropropane dioxygenase, NPD 3006 62.50 0 3364326..3365261 + 311 91977488 - RPD_3020 - putative cyclase 3007 64.40 0 3365300..3365917 - 205 91977489 - RPD_3021 - regulatory protein, TetR 3008 61.58 0 3365987..3367972 - 661 91977490 - RPD_3022 - 67 kDa myosin-cross-reactive antigen like 3009 67.91 0 3368197..3368679 + 160 91977491 - RPD_3023 - Holliday junction resolvase YqgF 3010 63.57 0 3368726..3369112 + 128 91977492 - RPD_3024 - SEC-C protein 3011 66.73 0 3369205..3370860 - 551 91977493 - RPD_3025 - acyl-CoA dehydrogenase-like 3012 65.83 0 3370980..3371696 - 238 91977494 - RPD_3026 - peptidase M15D, vanX D-ala-D-ala dipeptidase 3013 66.30 0 3371750..3373381 - 543 91977495 - RPD_3027 - thiamine pyrophosphate enzyme-like TPP binding region 3014 65.93 0 3373564..3374517 + 317 91977496 pyrB RPD_3028 - aspartate carbamoyltransferase catalytic subunit 3015 67.59 0 3374537..3375838 + 433 91977497 - RPD_3029 - dihydroorotase 3016 65.48 0 3375858..3376448 + 196 91977498 - RPD_3030 - putative glycerol-3-phosphate acyltransferase PlsY 3017 69.74 +1 3376534..3377802 + 422 91977499 - RPD_3031 - DNA processing protein DprA, putative 3018 64.29 0 3378375..3378584 - 69 91977500 - RPD_3032 - hypothetical protein 3019 65.87 0 3378832..3381576 + 914 91977501 - RPD_3033 - DNA topoisomerase I 3020 67.05 0 3381579..3383924 + 781 91977502 - RPD_3034 - ribonuclease R 3021 61.57 0 3383921..3384352 + 143 91977503 - RPD_3035 - hypothetical protein 3022 66.40 0 3384458..3385213 + 251 91977504 - RPD_3036 - NUDIX hydrolase 3023 54.17 -2 3385444..3385611 + 55 91977505 rpmG RPD_3037 - 50S ribosomal protein L33 3024 65.79 0 3385864..3387237 - 457 91977506 pleD RPD_3038 - response regulator PleD 3025 57.65 -2 3387247..3387612 - 121 91977507 - RPD_3039 - response regulator receiver 3026 64.00 0 3387755..3388054 + 99 91977508 - RPD_3040 - hypothetical protein 3027 67.21 0 3388051..3389340 + 429 91977509 - RPD_3041 - DNA polymerase IV 3028 63.38 0 3389501..3390322 - 273 91977510 - RPD_3042 - hypothetical protein 3029 67.09 0 3390659..3391126 + 155 91977511 - RPD_3043 - endoribonuclease L-PSP 3030 67.60 0 3391142..3391894 + 250 91977512 - RPD_3044 - glycerophosphoryl diester phosphodiesterase 3031 64.97 0 3391988..3393223 + 411 91977513 - RPD_3045 - hypothetical protein 3032 65.73 0 3393272..3393700 + 142 91977514 - RPD_3046 - histidine triad (HIT) protein 3033 66.23 0 3393710..3394171 - 153 91977515 - RPD_3047 - hypothetical protein 3034 68.99 +1 3394251..3394595 - 114 91977516 - RPD_3048 - hypothetical protein 3035 67.21 0 3394592..3395332 - 246 91977517 - RPD_3049 - AzlC-like 3036 62.50 0 3395483..3395842 + 119 91977518 - RPD_3050 - type IV pilus assembly PilZ 3037 68.49 +1 3395860..3396903 - 347 91977519 - RPD_3051 - lytic transglycosylase, catalytic 3038 68.70 +1 3396994..3397926 + 310 91977520 - RPD_3052 - hypothetical protein 3039 64.93 0 3398035..3398379 + 114 91977521 - RPD_3053 - type IV pilus assembly PilZ 3040 68.68 +1 3398496..3400430 + 644 91977522 - RPD_3054 - glycosyltransferase 3041 63.76 0 3400601..3403006 - 801 91977523 - RPD_3055 - ATPase AAA-2 3042 57.27 -2 3403204..3403533 - 109 91977524 - RPD_3056 - ATP-dependent Clp protease adaptor protein ClpS 3043 60.43 -1 3403994..3405388 + 464 91977525 - RPD_3057 - hypothetical protein 3044 67.24 0 3405827..3407563 + 578 91977526 - RPD_3058 - Serine-type D-Ala-D-Ala carboxypeptidase 3045 66.26 0 3407808..3408536 - 242 91977527 - RPD_3059 - heat shock protein DnaJ-like 3046 70.85 +1 3408680..3409420 - 246 91977528 - RPD_3060 - hypothetical protein 3047 61.96 0 3409513..3410340 - 275 91977529 - RPD_3061 - hypothetical protein 3048 65.48 0 3410610..3411533 - 307 91977530 - RPD_3062 - putative chromosome partitioning protein ParA 3049 68.31 0 3411762..3412613 + 283 91977531 - RPD_3063 - pantoate--beta-alanine ligase 3050 65.52 0 3412663..3413097 - 144 91977532 - RPD_3064 - hypothetical protein 3051 66.03 0 3413122..3415482 - 786 91977533 - RPD_3065 - TonB-dependent receptor 3052 62.52 0 3415841..3416563 + 240 91977534 - RPD_3066 - cyclic nucleotide-binding 3053 67.12 0 3416692..3417129 - 145 91977535 - RPD_3067 - hypothetical protein 3054 70.79 +1 3417166..3418209 - 347 91977536 - RPD_3068 - hypothetical protein 3055 56.89 -2 3418375..3418599 - 74 91977537 - RPD_3069 - hypothetical protein 3056 63.77 0 3418775..3419431 - 218 91977538 - RPD_3070 - glutathione S-transferase-like 3057 67.75 0 3419646..3419921 + 91 91977539 - RPD_3071 - hypothetical protein 3058 68.30 0 3419990..3420784 - 264 91977540 - RPD_3072 - hypothetical protein 3059 65.20 0 3420861..3421679 - 272 91977541 - RPD_3073 - 2,5-didehydrogluconate reductase 3060 67.93 0 3421760..3422155 - 131 91977542 - RPD_3074 - helix-turn-helix type 3 3061 66.60 0 3422137..3423558 - 473 91977543 - RPD_3075 - magnesium transporter 3062 65.29 0 3423721..3424518 + 265 91977544 - RPD_3076 - polysaccharide deacetylase 3063 69.61 +1 3424636..3425958 + 440 91977545 - RPD_3077 - polysaccharide deacetylase 3064 66.26 0 3426110..3426352 + 80 91977546 - RPD_3078 - prevent-host-death protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0