version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2921 55.17 -2 3269853..3270026 + 57 91977403 - RPD_2934 - hypothetical protein 2922 65.32 0 3270217..3270513 + 98 91977404 - RPD_2935 - hypothetical protein 2923 59.42 -1 3270645..3271265 - 206 91977405 - RPD_2936 - GCN5-related N-acetyltransferase 2924 66.67 0 3271538..3271936 - 132 91977406 - RPD_2937 - phenylacetic acid degradation-like protein 2925 64.25 0 3272181..3273461 - 426 91977407 - RPD_2938 - acetylornithine deacetylase 2926 65.15 0 3273591..3273854 + 87 91977408 - RPD_2939 - hypothetical protein 2927 64.81 0 3273902..3274225 - 107 91977409 - RPD_2940 - hypothetical protein 2928 59.93 -1 3275449..3275997 - 182 91977410 - RPD_2941 - CreA 2929 64.24 0 3276217..3277944 + 575 91977411 - RPD_2942 - hypothetical protein 2930 64.65 0 3278169..3279110 + 313 91977412 - RPD_2943 - polysaccharide deacetylase 2931 65.43 0 3279150..3279713 + 187 91977413 - RPD_2944 - hypothetical protein 2932 59.82 -1 3279717..3280169 - 150 91977414 - RPD_2945 - DoxX 2933 65.32 0 3280313..3282622 - 769 91977415 - RPD_2946 - malic enzyme 2934 63.96 0 3282675..3284447 - 590 91977416 aspS RPD_2947 - aspartyl-tRNA synthetase 2935 68.15 0 3284718..3286196 + 492 91977417 - RPD_2948 - hypothetical protein 2936 64.38 0 3286310..3287488 + 392 91977418 - RPD_2949 - ribonuclease D 2937 62.66 0 3287485..3288408 + 307 91977419 - RPD_2950 - hypothetical protein 2938 66.73 0 3288425..3289930 - 501 91977420 - RPD_2951 - Ppx/GppA phosphatase 2939 62.46 0 3289943..3292222 - 759 91977421 - RPD_2952 - polyphosphate kinase 2940 66.81 0 3292286..3292963 - 225 91977422 - RPD_2953 - hypothetical protein 2941 58.25 -1 3293010..3293639 - 209 91977423 - RPD_2954 - CDP-alcohol phosphatidyltransferase 2942 64.62 0 3293822..3294895 + 357 91977424 - RPD_2955 - phosphoribosylaminoimidazole synthetase 2943 64.20 0 3294901..3295548 + 215 91977425 - RPD_2956 - phosphoribosylglycinamide formyltransferase 2944 57.35 -2 3295614..3295817 - 67 91977426 - RPD_2957 - cold-shock DNA-binding domain protein 2945 62.78 0 3296352..3297098 + 248 91977427 - RPD_2958 - cyclic nucleotide-binding 2946 63.02 0 3297342..3297752 - 136 91977428 - RPD_2960 - hypothetical protein 2947 63.36 0 3298043..3298465 - 140 91977429 - RPD_2961 - nucleoside-diphosphate kinase 2948 66.51 0 3298641..3300500 + 619 91977430 - RPD_2962 - ABC transporter related 2949 68.32 0 3300541..3301086 - 181 91977431 - RPD_2963 - hypothetical protein 2950 64.24 0 3301206..3301658 - 150 91977432 - RPD_2964 - DNA polymerase III subunit chi 2951 64.74 0 3301674..3303176 - 500 91977433 - RPD_2965 - leucyl aminopeptidase 2952 62.21 0 3303598..3304764 + 388 91977434 - RPD_2966 - permease YjgP/YjgQ 2953 60.59 -1 3304778..3305863 + 361 91977435 - RPD_2967 - permease YjgP/YjgQ 2954 62.07 0 3305869..3308370 + 833 91977436 - RPD_2968 - organic solvent tolerance protein 2955 59.57 -1 3308439..3309368 + 309 91977437 - RPD_2969 - hypothetical protein 2956 67.66 0 3309468..3310472 + 334 91977438 pdxA RPD_2970 - 4-hydroxythreonine-4-phosphate dehydrogenase 2957 66.67 0 3310469..3311332 + 287 91977439 ksgA RPD_2971 - dimethyladenosine transferase 2958 63.55 0 3311348..3312406 + 352 91977440 - RPD_2972 - alcohol dehydrogenase GroES-like protein 2959 64.81 0 3312588..3313613 + 341 91977441 - RPD_2973 - hypothetical protein 2960 64.24 0 3313669..3314328 - 219 91977442 gmk RPD_2974 - guanylate kinase 2961 63.51 0 3314331..3315218 - 295 91977443 - RPD_2975 - hypothetical protein 2962 64.08 0 3315413..3316690 - 425 91977444 - RPD_2976 - aminodeoxychorismate lyase 2963 63.82 0 3316893..3318158 - 421 91977445 - RPD_2977 - 3-oxoacyl-(acyl carrier protein) synthase II 2964 55.00 -2 3318255..3318494 - 79 91977446 acpP RPD_2978 - acyl carrier protein 2965 65.85 0 3318794..3319531 - 245 91977447 - RPD_2979 - 3-oxoacyl-(acyl-carrier-protein) reductase 2966 62.21 0 3319712..3321124 + 470 91977448 - RPD_2980 - ethanolamine permease 2967 64.44 0 3321148..3322542 + 464 91977449 - RPD_2981 - ethanolamine ammonia lyase large subunit 2968 68.50 +1 3322539..3323354 + 271 91977450 - RPD_2982 - ethanolamine ammonia-lyase small subunit 2969 70.44 +1 3323479..3324432 - 317 91977451 - RPD_2983 - malonyl CoA-acyl carrier protein transacylase 2970 64.94 0 3324546..3325997 + 483 91977452 - RPD_2984 - GGDEF domain-containing protein 2971 64.39 0 3326284..3326766 + 160 91977453 rpsF RPD_2985 - 30S ribosomal protein S6 2972 63.75 0 3326772..3327011 + 79 91977454 rpsR RPD_2986 - 30S ribosomal protein S18 2973 67.62 0 3327142..3328089 + 315 91977455 - RPD_2987 - hypothetical protein 2974 65.47 0 3328125..3328709 + 194 91977456 rplI RPD_2988 - 50S ribosomal protein L9 2975 70.14 +1 3328784..3329905 - 373 91977457 - RPD_2989 - hypothetical protein 2976 62.19 0 3330275..3330475 - 66 91977458 - RPD_2990 - hypothetical protein 2977 62.99 0 3330985..3332481 + 498 91977459 - RPD_2991 - replicative DNA helicase 2978 68.86 +1 3332532..3333761 + 409 91977460 - RPD_2992 - alanine racemase 2979 61.18 -1 3333793..3334047 - 84 91977461 - RPD_2993 - hypothetical protein 2980 64.85 0 3334063..3335274 - 403 91977462 - RPD_2994 - hypothetical protein 2981 68.62 +1 3335356..3336843 + 495 91977463 - RPD_2995 - DNA repair protein RadA 2982 60.35 -1 3337057..3337689 + 210 91977464 - RPD_2996 - colicin V production protein 2983 64.66 0 3337713..3339257 + 514 91977465 - RPD_2997 - amidophosphoribosyltransferase 2984 66.40 0 3339430..3340173 + 247 91977466 - RPD_2998 - short-chain dehydrogenase/reductase SDR 2985 62.67 0 3340256..3341482 + 408 91977467 - RPD_2999 - putative urea/short-chain binding protein of ABC transporter 2986 61.45 -1 3341569..3341913 - 114 91977468 - RPD_3000 - GCN5-related N-acetyltransferase 2987 60.93 -1 3342311..3342589 + 92 91977469 - RPD_3001 - hypothetical protein 2988 62.88 0 3342670..3343302 - 210 91977470 - RPD_3002 - phage tail Collar 2989 66.92 0 3343763..3348850 + 1695 91977471 - RPD_3003 - Outer membrane autotransporter barrel 2990 67.30 0 3348891..3350156 - 421 91977472 - RPD_3004 - major facilitator transporter 2991 65.22 0 3350153..3351535 - 460 91977473 engA RPD_3005 - GTP-binding protein EngA 2992 69.63 +1 3351609..3352148 - 179 91977474 - RPD_3006 - hypothetical protein 2993 64.22 0 3352203..3352856 - 217 91977475 - RPD_3007 - hypothetical protein 2994 66.79 0 3353018..3353842 - 274 91977476 panB RPD_3008 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2995 63.93 0 3353846..3354430 - 194 91977477 - RPD_3009 - NnrU 2996 67.16 0 3354571..3355575 + 334 91977478 - RPD_3010 - twin-arginine translocation pathway signal 2997 62.19 0 3355642..3356088 - 148 91977479 - RPD_3011 - hypothetical protein 2998 64.87 0 3356225..3356503 - 92 91977480 - RPD_3012 - hypothetical protein 2999 53.11 -2 3357197..3357373 - 58 91977481 - RPD_3013 - hypothetical protein 3000 61.82 0 3357832..3359316 - 494 91977482 gatB RPD_3014 - aspartyl/glutamyl-tRNA amidotransferase subunit B 3001 63.58 0 3359446..3360546 - 366 91977483 - RPD_3015 - histidine kinase, dimerisation/phosphoacceptor 3002 66.60 0 3360632..3362110 - 492 91977484 gatA RPD_3016 - aspartyl/glutamyl-tRNA amidotransferase subunit A 3003 62.32 0 3362250..3362456 - 68 91977485 - RPD_3017 - hypothetical protein 3004 63.89 0 3362534..3362821 - 95 91977486 gatC RPD_3018 - aspartyl/glutamyl-tRNA amidotransferase subunit C 3005 68.71 +1 3362909..3363985 - 358 91977487 - RPD_3019 - 2-nitropropane dioxygenase, NPD 3006 62.50 0 3364326..3365261 + 311 91977488 - RPD_3020 - putative cyclase 3007 64.40 0 3365300..3365917 - 205 91977489 - RPD_3021 - regulatory protein, TetR 3008 61.58 0 3365987..3367972 - 661 91977490 - RPD_3022 - 67 kDa myosin-cross-reactive antigen like 3009 67.91 0 3368197..3368679 + 160 91977491 - RPD_3023 - Holliday junction resolvase YqgF 3010 63.57 0 3368726..3369112 + 128 91977492 - RPD_3024 - SEC-C protein 3011 66.73 0 3369205..3370860 - 551 91977493 - RPD_3025 - acyl-CoA dehydrogenase-like 3012 65.83 0 3370980..3371696 - 238 91977494 - RPD_3026 - peptidase M15D, vanX D-ala-D-ala dipeptidase 3013 66.30 0 3371750..3373381 - 543 91977495 - RPD_3027 - thiamine pyrophosphate enzyme-like TPP binding region 3014 65.93 0 3373564..3374517 + 317 91977496 pyrB RPD_3028 - aspartate carbamoyltransferase catalytic subunit 3015 67.59 0 3374537..3375838 + 433 91977497 - RPD_3029 - dihydroorotase 3016 65.48 0 3375858..3376448 + 196 91977498 - RPD_3030 - putative glycerol-3-phosphate acyltransferase PlsY 3017 69.74 +1 3376534..3377802 + 422 91977499 - RPD_3031 - DNA processing protein DprA, putative 3018 64.29 0 3378375..3378584 - 69 91977500 - RPD_3032 - hypothetical protein 3019 65.87 0 3378832..3381576 + 914 91977501 - RPD_3033 - DNA topoisomerase I 3020 67.05 0 3381579..3383924 + 781 91977502 - RPD_3034 - ribonuclease R 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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