version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2546 58.70 -1 2861702..2862040 + 112 91977028 - RPD_2556 - lipid A biosynthesis-like 2547 65.67 0 2862171..2863370 - 399 91977029 - RPD_2557 - cystathionine beta-lyase 2548 63.03 0 2863703..2864719 + 338 91977030 - RPD_2558 - lysine-arginine-ornithine-binding periplasmic protein 2549 64.01 0 2864737..2865942 + 401 91977031 - RPD_2559 - amino acid ABC transporter permease 2550 66.14 0 2865939..2867447 + 502 91977032 - RPD_2560 - amino acid ABC transporter permease 2551 61.27 -1 2867463..2868203 + 246 91977033 - RPD_2561 - ABC transporter related 2552 64.16 0 2868234..2868512 - 92 91977034 - RPD_2562 - hypothetical protein 2553 69.86 +1 2868621..2869121 + 166 91977035 - RPD_2563 - hypothetical protein 2554 64.55 0 2869566..2870603 - 345 91977036 - RPD_2564 - cysteine synthase A 2555 62.68 0 2870732..2871961 - 409 91977037 - RPD_2565 - cyclopropane-fatty-acyl-phospholipid synthase 2556 64.44 0 2872010..2872861 - 283 91977038 - RPD_2566 - hypothetical protein 2557 63.93 0 2872864..2874177 - 437 91977039 - RPD_2567 - amine oxidase 2558 66.80 0 2874610..2876058 + 482 91977040 - RPD_2568 - RND efflux system, outer membrane lipoprotein, NodT 2559 67.67 0 2876048..2877436 + 462 91977041 - RPD_2569 - secretion protein HlyD 2560 66.47 0 2877491..2880616 + 1041 91977042 - RPD_2570 - acriflavin resistance protein 2561 64.93 0 2880616..2883729 + 1037 91977043 - RPD_2571 - acriflavin resistance protein 2562 67.90 0 2883740..2884471 + 243 91977044 - RPD_2572 - hypothetical protein 2563 62.07 0 2884802..2884975 - 57 91977045 - RPD_2573 - hypothetical protein 2564 67.64 0 2885218..2885628 - 136 91977046 - RPD_2574 - hypothetical protein 2565 58.49 -1 2886044..2886361 + 105 91977047 - RPD_2575 - hypothetical protein 2566 66.52 0 2886633..2887298 + 221 91977048 - RPD_2576 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 2567 64.37 0 2887328..2888896 + 522 91977049 - RPD_2577 - Type I secretion outer membrane protein, TolC 2568 69.15 +1 2889215..2890018 + 267 91977050 - RPD_2578 - hypothetical protein 2569 64.47 0 2890251..2893157 + 968 91977051 valS RPD_2579 - valyl-tRNA synthetase 2570 62.37 0 2893413..2893970 + 185 91977052 - RPD_2580 - hypothetical protein 2571 60.03 -1 2894824..2895591 + 255 91977053 - RPD_2582 - hypothetical protein 2572 67.82 0 2895647..2896255 - 202 91977054 - RPD_2583 - 3-methyladenine DNA glycosylase 2573 66.25 0 2896401..2897360 + 319 91977055 - RPD_2584 - lipoyl synthase 2574 62.45 0 2897371..2897844 + 157 91977056 - RPD_2585 - cyclase/dehydrase 2575 69.38 +1 2897952..2898578 - 208 91977057 - RPD_2586 - CinA-like 2576 69.09 +1 2898580..2899776 - 398 91977058 - RPD_2587 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2577 66.76 0 2899977..2901038 + 353 91977059 - RPD_2588 - dihydrouridine synthase TIM-barrel protein NifR3 2578 63.34 0 2901035..2902207 + 390 91977060 - RPD_2589 - signal transduction histidine kinase, nitrogen specific, NtrB 2579 64.80 0 2902217..2903659 + 480 91977061 - RPD_2590 - nitrogen metabolism transcriptional regulator NtrC 2580 64.61 0 2903815..2906103 + 762 91977062 - RPD_2591 - multi-sensor signal transduction histidine kinase 2581 64.84 0 2906122..2907489 + 455 91977063 - RPD_2592 - two component, sigma54 specific, transcriptional regulator, Fis family 2582 64.92 0 2907526..2908383 + 285 91977064 - RPD_2593 - D-amino acid aminotransferase 2583 55.42 -2 2908563..2908811 + 82 91977065 hfq RPD_2594 - RNA-binding protein Hfq 2584 66.28 0 2908892..2910196 + 434 91977066 - RPD_2595 - GTP-binding protein, HSR1-related 2585 64.23 0 2910377..2913130 + 917 91977067 - RPD_2596 - DNA gyrase subunit A 2586 65.89 0 2913253..2913510 - 85 91977068 - RPD_2597 - hypothetical protein 2587 63.25 0 2913821..2914318 + 165 91977069 coaD RPD_2598 - phosphopantetheine adenylyltransferase 2588 64.36 0 2914344..2914907 + 187 91977070 - RPD_2599 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 2589 62.61 0 2914917..2915360 + 147 91977071 - RPD_2600 - hypothetical protein 2590 63.68 0 2915336..2915803 + 155 91977072 - RPD_2601 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 2591 67.77 0 2915950..2917032 + 360 91977073 queA RPD_2602 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2592 67.19 0 2917029..2918171 + 380 91977074 tgt RPD_2603 - queuine tRNA-ribosyltransferase 2593 54.67 -2 2918195..2918569 - 124 91977075 - RPD_2604 - hypothetical protein 2594 64.61 0 2918686..2918928 + 80 91977076 - RPD_2605 - hypothetical protein 2595 65.19 0 2918938..2919819 - 293 91977077 - RPD_2606 - hypothetical protein 2596 67.66 0 2919996..2920397 + 133 91977078 - RPD_2607 - endoribonuclease L-PSP 2597 62.25 0 2920468..2920671 + 67 91977079 - RPD_2608 - hypothetical protein 2598 60.56 -1 2921103..2921282 - 59 91977080 - RPD_2609 - antenna complex, alpha/beta subunit 2599 56.94 -2 2921295..2921438 - 47 91977081 - RPD_2610 - antenna complex, alpha/beta subunit 2600 69.04 +1 2921603..2922193 - 196 91977082 - RPD_2611 - formyl transferase-like 2601 64.73 0 2922488..2925175 - 895 91977083 - RPD_2612 - glycosyl transferase family protein 2602 68.79 +1 2925363..2925974 - 203 91977084 - RPD_2613 - hypothetical protein 2603 64.10 0 2926192..2927868 + 558 91977085 - RPD_2614 - putative beta (1-6) glucans synthase 2604 61.15 -1 2927828..2928208 - 126 91977086 - RPD_2615 - hypothetical protein 2605 70.17 +1 2928275..2929645 - 456 91977087 - RPD_2616 - hypothetical protein 2606 66.15 0 2929812..2931170 + 452 91977088 - RPD_2617 - nucleotidyl transferase 2607 64.81 0 2931317..2933143 + 608 91977089 - RPD_2618 - D-fructose-6-phosphate amidotransferase 2608 62.21 0 2933363..2934148 + 261 91977090 - RPD_2619 - hypothetical protein 2609 67.45 0 2934249..2936432 - 727 91977091 - RPD_2620 - DEAD/DEAH box helicase-like 2610 66.67 0 2936505..2936795 + 96 91977092 - RPD_2621 - hypothetical protein 2611 66.04 0 2936792..2940310 + 1172 91977093 - RPD_2622 - transcription-repair coupling factor 2612 68.30 0 2940328..2941551 - 407 91977094 - RPD_2623 - hypothetical protein 2613 68.96 +1 2941616..2943139 - 507 91977095 - RPD_2624 - putative acid-CoA ligase 2614 64.98 0 2943144..2944976 - 610 91977096 - RPD_2625 - extracellular solute-binding protein 2615 66.41 0 2945234..2946022 + 262 91977097 - RPD_2626 - invasion associated locus B 2616 57.36 -2 2946146..2946478 - 110 91977098 - RPD_2627 - hemimethylated DNA-binding region 2617 64.81 0 2946539..2947561 + 340 91977099 - RPD_2628 - auxin efflux carrier 2618 67.25 0 2947665..2948861 - 398 91977100 - RPD_2629 - 2-octaprenyl-6-methoxyphenyl hydroxylase 2619 62.86 0 2949011..2949745 + 244 91977101 - RPD_2630 - phosphatidylcholine synthase 2620 60.86 -1 2949742..2950464 + 240 91977102 - RPD_2631 - integral membrane protein TerC 2621 63.59 0 2950565..2951539 + 324 91977103 - RPD_2632 - zinc-binding alcohol dehydrogenase 2622 65.16 0 2951737..2953062 - 441 91977104 - RPD_2633 - hypothetical protein 2623 65.75 0 2953474..2954238 - 254 91977105 - RPD_2634 - hypothetical protein 2624 67.86 0 2954269..2955276 - 335 91977106 - RPD_2635 - allophanate hydrolase subunit 2 2625 65.71 0 2955273..2956001 - 242 91977107 - RPD_2636 - hypothetical protein 2626 68.63 +1 2956225..2956938 + 237 91977108 - RPD_2637 - hypothetical protein 2627 66.42 0 2956956..2957363 + 135 91977109 - RPD_2638 - cupin 2, barrel 2628 66.20 0 2957452..2958303 - 283 91977110 - RPD_2639 - hypothetical protein 2629 63.75 0 2958573..2959463 + 296 91977111 - RPD_2640 - dihydrodipicolinate synthase 2630 64.12 0 2959532..2959963 + 143 91977112 - RPD_2641 - large conductance mechanosensitive channel protein 2631 61.60 0 2960001..2960474 + 157 91977113 smpB RPD_2642 - SsrA-binding protein 2632 65.45 0 2960588..2961163 + 191 91977114 - RPD_2643 - BcpB protein 2633 67.26 0 2961250..2961927 - 225 91977115 - RPD_2644 - uracil-DNA glycosylase superfamily protein 2634 57.93 -2 2961929..2962615 - 228 91977116 - RPD_2645 - hypothetical protein 2635 60.56 -1 2962901..2963293 + 130 91977117 - RPD_2646 - DNA-directed RNA polymerase subunit omega 2636 63.83 0 2963542..2965830 + 762 91977118 - RPD_2647 - RelA/SpoT family protein 2637 68.63 +1 2965908..2966672 + 254 91977119 - RPD_2648 - pyridoxal phosphate biosynthetic protein PdxJ 2638 66.19 0 2966669..2967088 + 139 91977120 acpS RPD_2649 - 4'-phosphopantetheinyl transferase 2639 60.61 -1 2967350..2968108 + 252 91977121 - RPD_2650 - peptidase S26A, signal peptidase I 2640 65.20 0 2968105..2968920 + 271 91977122 - RPD_2651 - ribonuclease III 2641 63.85 0 2968913..2969836 + 307 91977123 era RPD_2652 - GTP-binding protein Era 2642 63.52 0 2969847..2970227 + 126 91977124 - RPD_2653 - hypothetical protein 2643 69.73 +1 2970277..2971026 + 249 91977125 recO RPD_2654 - DNA repair protein RecO 2644 63.79 0 2971131..2973392 + 753 91977126 - RPD_2655 - DNA topoisomerase IV subunit A 2645 62.11 0 2973448..2973732 - 94 91977127 - RPD_2656 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0