version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2400 58.33 -1 2685758..2686033 - 91 91976882 - RPD_2410 - type IV pilus assembly PilZ 2401 61.40 -1 2686104..2686445 - 113 91976883 - RPD_2411 - hypothetical protein 2402 60.28 -1 2686829..2687251 - 140 91976884 - RPD_2412 - nickel responsive regulator 2403 65.60 0 2687454..2689610 + 718 91976885 - RPD_2413 - TonB-dependent receptor, plug 2404 62.80 0 2690623..2692071 + 482 91976886 - RPD_2414 - putative Omp2b porin 2405 66.44 0 2692364..2694604 - 746 91976887 - RPD_2415 - lytic transglycosylase, catalytic 2406 66.67 0 2694869..2695768 + 299 91976888 - RPD_2416 - hypothetical protein 2407 68.45 +1 2695829..2696500 - 223 91976889 - RPD_2417 - hypothetical protein 2408 62.17 0 2696737..2697159 + 140 91976890 - RPD_2418 - NADH dehydrogenase 2409 67.55 0 2697208..2698560 - 450 91976891 - RPD_2419 - agarase 2410 66.67 0 2698658..2699602 - 314 91976892 - RPD_2420 - Alpha/beta hydrolase fold-3 2411 65.51 0 2699654..2700433 - 259 91976893 - RPD_2421 - short-chain dehydrogenase/reductase SDR 2412 70.56 +1 2700668..2701618 + 316 91976894 - RPD_2422 - hypothetical protein 2413 62.55 0 2701740..2702906 - 388 91976895 - RPD_2423 - peptidase S1 and S6, chymotrypsin/Hap 2414 65.73 0 2703067..2703387 - 106 91976896 - RPD_2424 - hypothetical protein 2415 68.15 0 2703509..2704183 - 224 91976897 aat RPD_2425 - leucyl/phenylalanyl-tRNA--protein transferase 2416 64.13 0 2704263..2705483 - 406 91976898 - RPD_2426 - hypothetical protein 2417 70.83 +1 2705713..2706384 - 223 91976899 - RPD_2427 - hypothetical protein 2418 66.30 0 2706397..2707479 - 360 91976900 - RPD_2428 - signal transduction histidine kinase 2419 58.11 -1 2707476..2707919 - 147 91976901 - RPD_2429 - response regulator receiver 2420 61.71 0 2707916..2709448 - 510 91976902 - RPD_2430 - multi-sensor signal transduction histidine kinase 2421 64.60 0 2709561..2710916 - 451 91976903 - RPD_2431 - acetyl-CoA carboxylase biotin carboxylase subunit 2422 67.06 0 2711025..2711537 - 170 91976904 - RPD_2432 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 2423 61.57 0 2711575..2712045 - 156 91976905 - RPD_2433 - 3-dehydroquinate dehydratase 2424 65.27 0 2712359..2713075 - 238 91976906 - RPD_2434 - hypothetical protein 2425 60.09 -1 2713337..2713549 + 70 91976907 - RPD_2435 - hypothetical protein 2426 63.41 0 2713681..2714448 - 255 91976908 - RPD_2436 - DSBA oxidoreductase 2427 62.38 0 2714667..2715296 - 209 91976909 - RPD_2437 - peroxidase 2428 66.93 0 2715527..2715901 - 124 91976910 - RPD_2438 - hypothetical protein 2429 67.16 0 2716058..2717485 - 475 91976911 - RPD_2439 - peptidase M48, Ste24p 2430 66.25 0 2717593..2718792 + 399 91976912 - RPD_2440 - aminotransferase, class I and II 2431 63.45 0 2719311..2720648 + 445 91976913 - RPD_2441 - sodium:dicarboxylate symporter 2432 67.66 0 2720723..2723854 - 1043 91976914 - RPD_2442 - ribonuclease 2433 65.46 0 2724526..2725851 + 441 91976915 - RPD_2443 - N-acetylmuramoyl-L-alanine amidase 2434 65.86 0 2726062..2728554 + 830 91976916 - RPD_2444 - penicillin-binding protein 1A 2435 65.74 0 2728822..2729790 + 322 91976917 - RPD_2445 - peptide chain release factor 2 2436 53.09 -2 2729787..2730368 - 193 91976918 - RPD_2446 - hypothetical protein 2437 68.55 +1 2730459..2731838 - 459 91976919 - RPD_2447 - peptidase M23B 2438 65.01 0 2731927..2732589 - 220 91976920 - RPD_2448 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2439 65.62 0 2732778..2736509 + 1243 91976921 - RPD_2449 - hypothetical protein 2440 62.08 0 2736533..2737099 - 188 91976922 - RPD_2450 - cytochrome B561 2441 65.71 0 2737332..2738585 - 417 91976923 - RPD_2451 - major facilitator transporter 2442 64.12 0 2738631..2739887 - 418 91976924 - RPD_2452 - tyrosyl-tRNA synthetase 2443 68.30 0 2740041..2741144 + 367 91976925 anmK RPD_2453 - anhydro-N-acetylmuramic acid kinase 2444 62.81 0 2741245..2741892 - 215 91976926 - RPD_2454 - hypothetical protein 2445 65.47 0 2742131..2743303 + 390 91976927 - RPD_2455 - aminotransferase, class V 2446 59.99 -1 2743386..2744867 + 493 91976928 - RPD_2456 - cysteine desulfurase activator complex subunit SufB 2447 64.16 0 2745000..2745758 + 252 91976929 - RPD_2457 - FeS assembly ATPase SufC 2448 68.87 +1 2745779..2747092 + 437 91976930 - RPD_2458 - FeS assembly protein SufD 2449 63.70 0 2747089..2748336 + 415 91976931 - RPD_2459 - SufS subfamily cysteine desulfurase 2450 65.04 0 2748333..2748701 + 122 91976932 - RPD_2460 - hypothetical protein 2451 63.95 0 2748802..2749206 + 134 91976933 - RPD_2461 - FeS assembly scaffold SufA 2452 63.86 0 2749236..2750303 - 355 91976934 - RPD_2462 - GGDEF domain-containing protein 2453 69.53 +1 2750409..2751911 - 500 91976935 - RPD_2463 - DEAD/DEAH box helicase-like 2454 64.55 0 2752273..2753262 - 329 91976936 - RPD_2464 - helix-turn-helix, AraC type 2455 64.53 0 2753592..2755277 + 561 91976937 - RPD_2465 - chemotaxis sensory transducer 2456 67.54 0 2755528..2757021 + 497 91976938 - RPD_2466 - peptidase C14, caspase catalytic subunit p20 2457 66.39 0 2757135..2757857 + 240 91976939 - RPD_2467 - aquaporin Z 2458 60.69 -1 2758068..2759957 - 629 91976940 - RPD_2468 - peptidase C14, caspase catalytic subunit p20 2459 59.35 -1 2760124..2760588 + 154 91976941 - RPD_2469 - hypothetical protein 2460 63.02 0 2760826..2761593 + 255 91976942 - RPD_2470 - hypothetical protein 2461 62.27 0 2761870..2762778 + 302 91976943 - RPD_2471 - dienelactone hydrolase 2462 62.43 0 2762857..2763045 - 62 91976944 - RPD_2472 - hypothetical protein 2463 63.87 0 2763150..2764187 - 345 91976945 - RPD_2473 - LysR, substrate-binding 2464 64.62 0 2764302..2765915 + 537 91976946 - RPD_2474 - gamma-glutamyltransferase 2465 62.32 0 2765956..2767173 + 405 91976947 - RPD_2475 - ABC-type branched-chain amino acid transport systems, periplasmic component 2466 63.51 0 2767349..2768140 - 263 91976948 - RPD_2476 - molybdate transport repressor 2467 70.51 +1 2768338..2768961 - 207 91976949 - RPD_2477 - hypothetical protein 2468 68.54 +1 2768965..2769765 - 266 91976950 - RPD_2478 - ABC transporter related 2469 69.50 +1 2769762..2770784 - 340 91976951 - RPD_2479 - transport system permease protein 2470 65.91 0 2770786..2771838 - 350 91976952 - RPD_2480 - periplasmic binding protein 2471 66.30 0 2771841..2772389 - 182 91976953 - RPD_2481 - hypothetical protein 2472 60.91 -1 2772908..2775094 + 728 91976954 - RPD_2482 - TonB-dependent receptor 2473 59.34 -1 2775186..2775458 + 90 91976955 - RPD_2483 - hypothetical protein 2474 66.18 0 2775572..2777626 - 684 91976956 - RPD_2484 - DNA topoisomerase IV subunit B 2475 65.73 0 2778089..2778619 + 176 91976957 - RPD_2485 - DedA family integral membrane protein 2476 66.97 0 2778753..2779745 + 330 91976958 - RPD_2486 - twin-arginine translocation pathway signal 2477 68.16 0 2780077..2780745 + 222 91976959 - RPD_2487 - negative transcriptional regulator 2478 68.78 +1 2780757..2781752 + 331 91976960 - RPD_2488 - N-acetyl-gamma-glutamyl-phosphate reductase 2479 69.82 +1 2781861..2782463 + 200 91976961 - RPD_2489 - methyltransferase type 11 2480 65.02 0 2782724..2784541 + 605 91976962 - RPD_2490 - radical SAM family protein 2481 69.42 +1 2784770..2785132 + 120 91976963 - RPD_2491 - hypothetical protein 2482 62.71 0 2785143..2787011 - 622 91976964 - RPD_2492 - Poly(R)-hydroxyalkanoic acid synthase, class I 2483 70.37 +1 2787252..2787602 + 116 91976965 - RPD_2493 - hypothetical protein 2484 65.85 0 2787788..2789008 + 406 91976966 - RPD_2494 - aminotransferase 2485 68.56 +1 2789084..2790403 + 439 91976967 - RPD_2495 - homoserine dehydrogenase 2486 66.87 0 2790468..2791472 + 334 91976968 glpX RPD_2496 - fructose 1,6-bisphosphatase II 2487 63.74 0 2791584..2792027 + 147 91976969 - RPD_2497 - GCN5-related N-acetyltransferase 2488 64.06 0 2792159..2792887 + 242 91976970 - RPD_2498 - haloacid dehalogenase, type II 2489 69.03 +1 2793058..2794959 + 633 91976971 - RPD_2499 - single-stranded-DNA-specific exonuclease RecJ 2490 66.67 0 2795088..2795396 - 102 91976972 - RPD_2500 - hypothetical protein 2491 67.83 0 2795473..2796588 - 371 91976973 - RPD_2501 - hypothetical protein 2492 68.62 +1 2796599..2797825 - 408 91976974 - RPD_2502 - lytic murein transglycosylase 2493 68.14 0 2797924..2799552 - 542 91976975 - RPD_2503 - peptidase M23B 2494 62.08 0 2799710..2800276 - 188 91976976 - RPD_2504 - elongation factor P 2495 69.03 +1 2800417..2801472 + 351 91976977 - RPD_2505 - lysine--tRNA ligase 2496 66.67 0 2801469..2802560 + 363 91976978 - RPD_2506 - hypothetical protein 2497 70.44 +1 2802780..2803097 + 105 91976979 - RPD_2507 - hypothetical protein 2498 64.24 0 2803126..2803701 - 191 91976980 - RPD_2508 - hypothetical protein 2499 66.24 0 2804281..2804517 + 78 91976981 - RPD_2509 - hypothetical protein 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0