version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 185 62.19 0 208316..209230 - 304 91974667 - RPD_0185 - binding-protein-dependent transport systems inner membrane component 186 62.52 0 209323..210648 - 441 91974668 - RPD_0186 - extracellular solute-binding protein 187 65.42 0 210854..212059 - 401 91974669 - RPD_0187 - L-carnitine dehydratase/bile acid-inducible protein F 188 58.61 -1 212363..212821 - 152 91974670 - RPD_0188 - hypothetical protein 189 69.88 +1 212916..214253 + 445 91974671 - RPD_0189 - 3-phosphoshikimate 1-carboxyvinyltransferase 190 65.33 0 214271..214945 - 224 91974672 - RPD_0190 - hypothetical protein 191 68.08 0 215116..215754 + 212 91974673 - RPD_0191 - cytidylate kinase 192 63.02 0 216049..217746 + 565 91974674 rpsA RPD_0192 - 30S ribosomal protein S1 193 66.36 0 217997..218977 + 326 91974675 - RPD_0193 - signal peptide peptidase SppA, 36K type 194 60.78 -1 219124..219429 + 101 91974676 ihfB RPD_0194 - integration host factor subunit beta 195 66.43 0 219442..219855 + 137 91974677 - RPD_0195 - hypothetical protein 196 68.19 0 219911..220567 + 218 91974678 - RPD_0196 - N-(5'-phosphoribosyl)anthranilate isomerase 197 65.27 0 220569..221783 + 404 91974679 - RPD_0197 - tryptophan synthase subunit beta 198 67.62 0 221783..222619 + 278 91974680 trpA RPD_0198 - tryptophan synthase subunit alpha 199 64.91 0 222727..223695 + 322 91974681 - RPD_0199 - acetyl-CoA carboxylase subunit beta 200 68.89 +1 223692..225038 + 448 91974682 - RPD_0200 - FolC bifunctional protein 201 63.24 0 225390..225710 - 106 91974683 - RPD_0201 - thioredoxin 202 68.25 0 225807..229286 - 1159 91974684 - RPD_0202 - UvrD/REP helicase 203 69.37 +1 229283..232432 - 1049 91974685 - RPD_0203 - hypothetical protein 204 66.28 0 232504..233277 - 257 91974686 - RPD_0204 - nucleotidyl transferase 205 63.81 0 233402..233716 - 104 91974687 - RPD_0205 - hypothetical protein 206 68.58 +1 233930..235447 - 505 91974688 - RPD_0206 - hypothetical protein 207 66.27 0 235444..237957 - 837 91974689 - RPD_0207 - PAS/PAC sensor signal transduction histidine kinase 208 67.54 0 238137..238595 - 152 91974690 - RPD_0208 - deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 209 67.12 0 238592..240127 - 511 91974691 - RPD_0209 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 210 68.06 0 240150..241724 - 524 91974692 - RPD_0210 - 2-polyprenylphenol 6-hydroxylase 211 63.25 0 241721..242482 - 253 91974693 ubiE RPD_0211 - ubiquinone/menaquinone biosynthesis methyltransferase 212 68.59 +1 242693..243574 + 293 91974694 - RPD_0212 - formamidopyrimidine-DNA glycosylase 213 64.80 0 243743..244705 - 320 91974695 - RPD_0213 - transposase, IS4 214 68.72 +1 245415..246779 - 454 91974696 - RPD_0214 - peptidoglycan binding domain-containing protein 215 69.79 +1 246901..247701 + 266 91974697 - RPD_0215 - UBA/THIF-type NAD/FAD binding fold 216 64.80 0 247862..248824 - 320 91974698 - RPD_0216 - transposase, IS4 217 66.27 0 249040..250041 - 333 91974699 - RPD_0217 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 218 66.10 0 250275..250799 + 174 91974700 - RPD_0218 - hypothetical protein 219 61.96 0 251081..251569 - 162 91974701 - RPD_0219 - ferric-uptake regulator 220 63.83 0 251784..252347 + 187 91974702 - RPD_0220 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 221 66.34 0 252427..253653 + 408 91974703 - RPD_0221 - 3-oxoacyl-(acyl carrier protein) synthase I 222 65.25 0 253850..254695 + 281 91974704 - RPD_0222 - enoyl-(acyl carrier protein) reductase 223 66.80 0 255039..257237 - 732 91974705 - RPD_0223 - catalase/peroxidase HPI 224 70.29 +1 257482..258420 + 312 91974706 - RPD_0224 - LysR family transcriptional regulator 225 62.98 0 258512..260194 - 560 91974707 - RPD_0225 - methyl-accepting chemotaxis protein 226 62.87 0 260510..262195 - 561 91974708 - RPD_0226 - methyl-accepting chemotaxis protein 227 65.42 0 262822..264990 - 722 91974709 - RPD_0227 - polynucleotide phosphorylase/polyadenylase 228 58.52 -1 265334..265603 - 89 91974710 rpsO RPD_0228 - 30S ribosomal protein S15 229 67.30 0 265606..266712 - 368 91974711 truB RPD_0229 - tRNA pseudouridine synthase B 230 65.69 0 266712..267122 - 136 91974712 rbfA RPD_0230 - ribosome-binding factor A 231 68.59 +1 267294..269945 - 883 91974713 infB RPD_0231 - translation initiation factor IF-2 232 64.28 0 269938..270732 - 264 91974714 - RPD_0232 - hypothetical protein 233 65.74 0 270895..272517 - 540 91974715 nusA RPD_0233 - transcription elongation factor NusA 234 68.19 0 272520..273308 - 262 91974716 - RPD_0234 - hypothetical protein 235 68.97 +1 273587..274672 + 361 91974717 - RPD_0235 - hypothetical protein 236 61.48 -1 274805..275575 - 256 91974718 trmB RPD_0236 - tRNA (guanine-N(7))-methyltransferase 237 60.71 -1 275694..276113 - 139 91974719 - RPD_0237 - XRE family transcriptional regulator 238 64.87 0 276304..277914 - 536 91974720 lnt RPD_0238 - apolipoprotein N-acyltransferase 239 66.93 0 277926..279053 - 375 91974721 - RPD_0239 - HlyC/CorC family transporters 240 64.97 0 279055..279642 - 195 91974722 - RPD_0240 - hypothetical protein 241 67.61 0 279642..280697 - 351 91974723 - RPD_0241 - PhoH-like protein 242 66.60 0 280703..282124 - 473 91974724 - RPD_0242 - tRNA-i(6)A37 modification enzyme MiaB 243 65.60 0 282222..282875 - 217 91974725 - RPD_0243 - HAD family hydrolase 244 60.19 -1 282970..283401 - 143 91974726 - RPD_0244 - ferric-uptake regulator 245 62.55 0 283463..283948 - 161 91974727 - RPD_0245 - ribosomal-protein-alanine acetyltransferase 246 71.55 +1 283959..284654 - 231 91974728 - RPD_0246 - peptidase M22, glycoprotease 247 64.73 0 284798..285364 - 188 91974729 - RPD_0247 - nitrogen-fixing NifU-like 248 68.89 +1 285516..286010 - 164 91974730 - RPD_0248 - hypothetical protein 249 64.09 0 286169..287215 - 348 162138292 - RPD_0249 - tryptophanyl-tRNA synthetase 250 71.48 +1 287292..288848 - 518 91974732 - RPD_0250 - integral membrane protein MviN 251 66.87 0 289114..290115 + 333 91974733 - RPD_0251 - PfkB 252 65.25 0 290262..291956 - 564 91974734 - RPD_0252 - acyl-CoA synthetase 253 63.30 0 292089..293276 - 395 91974735 - RPD_0253 - beta-lactamase 254 71.56 +1 293543..293869 + 108 91974736 - RPD_0254 - hypothetical protein 255 66.33 0 294048..295541 + 497 91974737 - RPD_0255 - succinic semialdehyde dehydrogenase 256 69.00 +1 295704..296390 - 228 91974738 - RPD_0256 - hypothetical protein 257 66.26 0 296392..297378 - 328 91974739 - RPD_0257 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 258 66.67 0 297378..298202 - 274 91974740 - RPD_0258 - binding-protein-dependent transport systems inner membrane component 259 70.11 +1 298199..299011 - 270 91974741 - RPD_0259 - ABC transporter related 260 62.75 0 299022..300143 - 373 91974742 - RPD_0260 - perplasmic binding protein of ABC transporter 261 71.96 +2 300297..301109 + 270 91974743 - RPD_0261 - creatininase 262 65.69 0 301191..302822 - 543 91974744 - RPD_0262 - ferredoxin-dependent glutamate synthase 263 68.39 0 303023..304009 + 328 91974745 - RPD_0263 - hypothetical protein 264 68.72 +1 304010..305326 + 438 91974746 - RPD_0264 - FolC bifunctional protein 265 67.17 0 305411..306409 + 332 91974747 - RPD_0265 - zinc-binding alcohol dehydrogenase 266 60.34 -1 306439..306675 - 78 91974748 - RPD_0266 - hypothetical protein 267 67.31 0 307917..308537 + 206 91974749 - RPD_0267 - hypothetical protein 268 63.44 0 308588..308866 + 92 91974750 - RPD_0268 - transglycosylase-associated protein 269 66.16 0 309048..309830 - 260 91974751 - RPD_0269 - short-chain dehydrogenase/reductase SDR 270 69.29 +1 310089..311156 + 355 91974752 - RPD_0270 - acyl-CoA dehydrogenase-like 271 66.15 0 311182..312342 + 386 91974753 - RPD_0271 - acyl-CoA dehydrogenase-like 272 67.66 0 312486..313292 + 268 91974754 - RPD_0272 - enoyl-CoA hydratase/isomerase 273 66.93 0 313355..314119 - 254 91974755 - RPD_0273 - hypothetical protein 274 67.81 0 314122..314910 - 262 91974756 - RPD_0274 - enoyl-CoA hydratase 275 62.69 0 315107..316312 - 401 91974757 - RPD_0275 - putative ureA/short-chain amide ABC transporter 276 66.29 0 316528..317322 + 264 91974758 - RPD_0276 - nuclease (SNase-like) 277 67.67 0 317343..318836 + 497 91974759 - RPD_0277 - peptidase M48, Ste24p 278 62.82 0 319035..320333 - 432 91974760 - RPD_0278 - transcription factor CarD 279 56.93 -2 320466..320804 - 112 91974761 - RPD_0279 - 4Fe-4S ferredoxin, iron-sulfur binding 280 65.56 0 320879..321148 - 89 91974762 - RPD_0280 - RNA-binding S4 281 67.86 0 321188..324547 - 1119 91974763 - RPD_0281 - helicase-like 282 65.31 0 324975..325856 - 293 91974764 - RPD_0282 - hypothetical protein 283 66.67 0 326169..326474 + 101 91974765 rpmB RPD_0283 - 50S ribosomal protein L28 284 64.26 0 326692..330009 + 1105 91974766 - RPD_0284 - multi-sensor hybrid histidine kinase 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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