version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1868 63.38 0 2099395..2100276 - 293 91976350 - RPD_1873 - LysR family transcriptional regulator 1869 66.29 0 2100273..2101331 - 352 91976351 - RPD_1874 - hypothetical protein 1870 65.27 0 2101568..2102428 + 286 91976352 - RPD_1875 - hypothetical protein 1871 65.20 0 2102526..2105327 + 933 91976353 - RPD_1876 - phosphoenolpyruvate carboxylase 1872 68.74 +1 2105639..2106943 + 434 91976354 - RPD_1877 - OmpA/MotB 1873 65.46 0 2107099..2108013 - 304 91976355 - RPD_1878 - short-chain dehydrogenase/reductase SDR 1874 64.12 0 2108147..2109286 - 379 91976356 - RPD_1879 - putative lipid transfer protein 1875 62.32 0 2109292..2109705 - 137 91976357 - RPD_1880 - hypothetical protein 1876 67.60 0 2110090..2111481 + 463 91976358 - RPD_1881 - amidase 1877 66.08 0 2111474..2112160 + 228 91976359 - RPD_1882 - hypothetical protein 1878 66.67 0 2112250..2112726 - 158 91976360 - RPD_1883 - phenylacetic acid degradation-related protein 1879 63.94 0 2112887..2114059 - 390 91976361 - RPD_1884 - 4-hydroxybenzoate 3-monooxygenase 1880 62.18 0 2114250..2115275 + 341 91976362 - RPD_1885 - TRAP dicarboxylate transporter- DctP subunit 1881 65.18 0 2115856..2116662 + 268 91976363 - RPD_1886 - enoyl-CoA hydratase 1882 65.72 0 2116664..2118571 + 635 91976364 - RPD_1887 - feruloyl-CoA synthase 1883 60.71 -1 2118722..2119141 + 139 91976365 - RPD_1888 - thioesterase superfamily protein 1884 63.73 0 2119225..2120382 + 385 91976366 - RPD_1889 - extracellular ligand-binding receptor 1885 66.67 0 2120482..2121201 - 239 91976367 - RPD_1890 - ABC transporter related 1886 66.33 0 2121198..2122967 - 589 91976368 - RPD_1891 - ABC transporter related 1887 63.59 0 2122973..2124013 - 346 91976369 - RPD_1892 - inner-membrane translocator 1888 63.58 0 2124184..2124702 + 172 91976370 - RPD_1893 - regulatory protein, MarR 1889 63.34 0 2124876..2127281 + 801 91976371 - RPD_1894 - GGDEF domain-containing protein 1890 64.87 0 2127302..2129026 - 574 91976372 - RPD_1895 - sodium/hydrogen exchanger 1891 65.13 0 2129075..2129659 + 194 91976373 - RPD_1896 - hypothetical protein 1892 69.86 +1 2129817..2131133 - 438 91976374 - RPD_1897 - hydroxypyruvate reductase 1893 61.33 -1 2131309..2132544 - 411 91976375 - RPD_1898 - extracellular ligand-binding receptor 1894 66.74 0 2132717..2134159 - 480 91976376 - RPD_1899 - phage SPO1 DNA polymerase-related protein 1895 66.26 0 2134256..2135494 - 412 91976377 - RPD_1900 - radical SAM family protein 1896 71.10 +1 2135662..2136450 + 262 91976378 - RPD_1901 - hypothetical protein 1897 70.70 +1 2136500..2137936 + 478 91976379 - RPD_1902 - hypothetical protein 1898 65.83 0 2137950..2141282 + 1110 91976380 dnaE2 RPD_1903 - error-prone DNA polymerase 1899 69.27 +1 2141372..2142868 + 498 91976381 - RPD_1904 - L-carnitine dehydratase/bile acid-inducible protein F 1900 58.87 -1 2143493..2143633 + 46 91976382 - RPD_1905 - hypothetical protein 1901 61.68 0 2143823..2144143 + 106 91976383 - RPD_1906 - hypothetical protein 1902 66.24 0 2144351..2145769 - 472 91976384 - RPD_1907 - Type I secretion outer membrane protein, TolC 1903 62.05 0 2145972..2146751 - 259 91976385 - RPD_1908 - enoyl-CoA hydratase/isomerase 1904 66.81 0 2146839..2147534 - 231 91976386 - RPD_1909 - hypothetical protein 1905 67.36 0 2147776..2148351 + 191 91976387 - RPD_1910 - RNA polymerase sigma factor 1906 66.04 0 2148354..2148992 + 212 91976388 - RPD_1911 - hypothetical protein 1907 64.91 0 2149167..2149337 + 56 91976389 - RPD_1912 - hypothetical protein 1908 61.02 -1 2149390..2150505 - 371 91976390 - RPD_1913 - hypothetical protein 1909 63.35 0 2150543..2151688 - 381 91976391 - RPD_1914 - GGDEF domain-containing protein 1910 59.12 -1 2152101..2152670 + 189 91976392 - RPD_1915 - RNA polymerase sigma factor 1911 67.88 0 2152667..2153491 + 274 91976393 - RPD_1916 - hypothetical protein 1912 63.54 0 2154062..2154604 + 180 91976394 - RPD_1917 - hypothetical protein 1913 64.73 0 2155174..2157240 + 688 91976395 - RPD_1918 - chemotaxis sensory transducer 1914 66.19 0 2157348..2157983 - 211 91976396 - RPD_1919 - chemotaxis sensory transducer 1915 67.85 0 2158295..2159647 - 450 91976397 - RPD_1920 - twin-arginine translocation pathway signal 1916 69.14 +1 2159763..2160410 - 215 91976398 - RPD_1921 - peptidase C15, pyroglutamyl peptidase I 1917 69.59 +1 2160407..2161399 - 330 91976399 - RPD_1922 - arginine/ornithine transport system ATPase 1918 62.50 0 2161580..2162059 + 159 91976400 - RPD_1923 - hypothetical protein 1919 63.01 0 2162066..2162857 - 263 91976401 - RPD_1924 - hypothetical protein 1920 61.45 -1 2162854..2163198 - 114 91976402 - RPD_1925 - hypothetical protein 1921 64.76 0 2163200..2163514 - 104 91976403 - RPD_1926 - DNA polymerase, beta-like region 1922 66.34 0 2163550..2165709 - 719 91976404 - RPD_1927 - methylmalonyl-CoA mutase 1923 66.67 0 2165945..2166409 - 154 91976405 - RPD_1928 - glutathione-dependent formaldehyde-activating, GFA 1924 69.12 +1 2166406..2168277 - 623 91976406 - RPD_1929 - methylmalonyl-CoA mutase 1925 66.67 0 2168401..2168892 - 163 91976407 - RPD_1930 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1926 64.81 0 2168885..2169262 - 125 91976408 - RPD_1931 - dihydroneopterin aldolase 1927 67.09 0 2169259..2170437 - 392 91976409 - RPD_1932 - dihydropteroate synthase 1928 53.42 -2 2171035..2172423 + 462 91976410 - RPD_1933 - hypothetical protein 1929 62.99 0 2172685..2173092 - 135 91976411 - RPD_1934 - hypothetical protein 1930 64.06 0 2173112..2173495 - 127 91976412 - RPD_1935 - hypothetical protein 1931 65.30 0 2173810..2175420 + 536 91976413 - RPD_1936 - protein of unknown function DUF853, NPT hydrolase putative 1932 65.67 0 2175443..2176849 + 468 91976414 - RPD_1937 - hypothetical protein 1933 63.33 0 2177139..2177918 - 259 91976415 - RPD_1938 - hypothetical protein 1934 68.76 +1 2178227..2179135 + 302 91976416 - RPD_1939 - hypothetical protein 1935 64.51 0 2179307..2179723 + 138 91976417 - RPD_1940 - MucR family transcriptional regulator 1936 69.32 +1 2179955..2180557 + 200 91976418 - RPD_1941 - hypothetical protein 1937 62.27 0 2180580..2181011 - 143 91976419 - RPD_1942 - Fe-S metabolism associated SufE 1938 63.21 0 2181120..2181524 - 134 91976420 - RPD_1943 - hypothetical protein 1939 66.39 0 2181926..2183749 + 607 91976421 - RPD_1944 - multi-sensor signal transduction histidine kinase 1940 68.54 +1 2183742..2184542 + 266 91976422 - RPD_1945 - peptidoglycan binding domain-containing protein 1941 65.80 0 2184637..2184984 + 115 91976423 - RPD_1946 - hypothetical protein 1942 68.42 0 2185117..2186088 - 323 91976424 - RPD_1947 - hypothetical protein 1943 65.62 0 2186339..2187385 - 348 91976425 - RPD_1948 - polysaccharide deacetylase 1944 65.50 0 2187465..2187980 - 171 91976426 - RPD_1949 - hypothetical protein 1945 67.57 0 2188366..2189142 + 258 91976427 - RPD_1950 - hypothetical protein 1946 65.25 0 2189156..2189719 - 187 91976428 - RPD_1951 - hypothetical protein 1947 69.60 +1 2189716..2190294 - 192 91976429 - RPD_1952 - hypothetical protein 1948 66.44 0 2190326..2192578 - 750 91976430 - RPD_1953 - penicillin-binding protein 1A 1949 63.85 0 2193043..2195064 + 673 91976431 - RPD_1954 - ATPase 1950 66.47 0 2195061..2195570 + 169 91976432 - RPD_1955 - hypothetical protein 1951 63.48 0 2195992..2197059 - 355 91976433 - RPD_1956 - twin-arginine translocation pathway signal 1952 67.00 0 2197446..2197742 + 98 91976434 - RPD_1957 - hypothetical protein 1953 69.30 +1 2197957..2199549 + 530 91976435 - RPD_1958 - major facilitator transporter 1954 68.66 +1 2199725..2201128 + 467 91976436 - RPD_1959 - hypothetical protein 1955 59.52 -1 2201308..2201475 + 55 91976437 - RPD_1960 - Flp/Fap pilin component 1956 63.70 0 2201747..2201881 + 44 91976438 - RPD_1961 - hypothetical protein 1957 62.34 0 2202107..2202337 + 76 91976439 - RPD_1962 - hypothetical protein 1958 67.35 0 2202441..2203316 + 291 91976440 - RPD_1963 - hypothetical protein 1959 71.49 +1 2203420..2204580 + 386 91976441 - RPD_1964 - hypothetical protein 1960 54.86 -2 2204685..2204972 - 95 91976442 - RPD_1965 - excinuclease ABC subunit C 1961 69.64 +1 2205112..2206287 + 391 91976443 - RPD_1966 - Phage portal protein, HK97 1962 67.12 0 2206328..2206546 + 72 91976444 - RPD_1967 - hypothetical protein 1963 68.31 0 2206556..2206738 + 60 91976445 - RPD_1968 - hypothetical protein 1964 69.63 +1 2207053..2207760 + 235 91976446 - RPD_1969 - peptidase U35, phage prohead HK97 1965 67.67 0 2207879..2209174 + 431 91976447 - RPD_1970 - phage major capsid protein, HK97 1966 50.91 -2 2209291..2209785 - 164 91976448 - RPD_1971 - hypothetical protein 1967 56.14 -2 2210219..2211691 + 490 91976449 - RPD_1972 - DNA-cytosine methyltransferase 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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