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Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 140 69.28 +1 159602..160213 - 203 91974622 - RPD_0140 - hypothetical protein 141 65.12 0 160419..160742 - 107 91974623 - RPD_0141 - hypothetical protein 142 64.14 0 160993..161466 + 157 91974624 - RPD_0142 - hypothetical protein 143 68.78 +1 161499..161972 + 157 91974625 - RPD_0143 - hypothetical protein 144 69.95 +1 161969..162517 + 182 91974626 - RPD_0144 - hypothetical protein 145 70.97 +1 162595..163710 - 371 91974627 - RPD_0145 - hypothetical protein 146 68.27 0 163879..165252 + 457 91974628 - RPD_0146 - MmgE/PrpD 147 61.74 0 165321..165929 + 202 91974629 - RPD_0147 - hypothetical protein 148 67.09 0 166201..167619 + 472 91974630 - RPD_0148 - malonyl-CoA decarboxylase 149 66.99 0 167670..168587 + 305 91974631 - RPD_0149 - Pirin-like 150 67.65 0 168656..169573 + 305 91974632 - RPD_0150 - phosphoribosylaminoimidazole-succinocarboxamide synthase 151 69.86 +1 169820..170602 + 260 91974633 - RPD_0151 - enoyl-CoA hydratase 152 65.97 0 170705..171424 - 239 91974634 radC RPD_0152 - DNA repair protein RadC 153 64.07 0 171562..173370 - 602 91974635 - RPD_0153 - chemotaxis sensory transducer 154 62.41 0 173763..174749 + 328 91974636 - RPD_0154 - hypothetical protein 155 64.85 0 175023..175847 - 274 91974637 - RPD_0155 - methionine aminopeptidase, type I 156 64.84 0 175945..177258 - 437 91974638 - RPD_0156 - MscS mechanosensitive ion channel 157 68.62 +1 177483..179273 + 596 91974639 - RPD_0157 - potassium/proton antiporter 158 71.07 +1 179274..180227 - 317 91974640 mepA RPD_0158 - penicillin-insensitive murein endopeptidase 159 66.62 0 180631..182859 + 742 91974641 - RPD_0159 - GGDEF domain-containing protein 160 64.44 0 183064..184008 - 314 91974642 - RPD_0160 - hypothetical protein 161 72.56 +2 184346..185770 + 474 91974643 - RPD_0161 - twin-arginine translocation pathway signal 162 68.36 0 185997..188471 - 824 91974644 pheT RPD_0162 - phenylalanyl-tRNA synthetase subunit beta 163 66.67 0 188553..189137 - 194 91974645 - RPD_0163 - hypothetical protein 164 64.64 0 189275..190357 - 360 91974646 pheS RPD_0164 - phenylalanyl-tRNA synthetase subunit alpha 165 64.72 0 190501..190860 - 119 91974647 rplT RPD_0165 - 50S ribosomal protein L20 166 58.21 -1 190948..191148 - 66 91974648 rpmI RPD_0166 - 50S ribosomal protein L35 167 74.88 +2 191512..191937 + 141 91974649 - RPD_0167 - hypothetical protein 168 58.90 -1 192320..192718 - 132 91974650 infC RPD_0168 - translation initiation factor IF-3 169 70.18 +1 193195..193992 + 265 91974651 - RPD_0169 - hypothetical protein 170 66.93 0 194098..195240 - 380 91974652 - RPD_0170 - 4Fe-4S ferredoxin, iron-sulfur binding 171 64.50 0 195300..195992 - 230 91974653 - RPD_0171 - glutathione S-transferase-like 172 61.59 0 196204..197010 + 268 91974654 - RPD_0172 - undecaprenyl pyrophosphate phosphatase 173 67.39 0 197071..198036 - 321 91974655 - RPD_0173 - 3-beta hydroxysteroid dehydrogenase/isomerase 174 63.74 0 198454..199068 + 204 91974656 - RPD_0174 - 3'-5' exonuclease 175 64.85 0 199311..200081 + 256 91974657 - RPD_0175 - hypothetical protein 176 64.41 0 200078..200743 + 221 91974658 - RPD_0176 - OstA-like protein 177 66.46 0 200801..201754 + 317 91974659 - RPD_0177 - ABC transporter related 178 64.17 0 201922..203562 + 546 91974660 - RPD_0178 - RNA polymerase factor sigma-54 179 64.04 0 203618..204226 + 202 91974661 - RPD_0179 - sigma 54 modulation protein/ribosomal protein S30EA 180 66.67 0 204510..204971 + 153 91974662 - RPD_0180 - PTS IIA-like nitrogen-regulatory protein PtsN 181 62.92 0 205475..205741 - 88 91974663 - RPD_0181 - hypothetical protein 182 58.92 -1 205792..206217 - 141 91974664 - RPD_0182 - heat shock protein Hsp20 183 67.31 0 206368..207462 - 364 91974665 - RPD_0183 - glycerol-3-phosphate transporter ATP-binding subunit 184 61.13 -1 207468..208316 - 282 91974666 - RPD_0184 - binding-protein-dependent transport systems inner membrane component 185 62.19 0 208316..209230 - 304 91974667 - RPD_0185 - binding-protein-dependent transport systems inner membrane component 186 62.52 0 209323..210648 - 441 91974668 - RPD_0186 - extracellular solute-binding protein 187 65.42 0 210854..212059 - 401 91974669 - RPD_0187 - L-carnitine dehydratase/bile acid-inducible protein F 188 58.61 -1 212363..212821 - 152 91974670 - RPD_0188 - hypothetical protein 189 69.88 +1 212916..214253 + 445 91974671 - RPD_0189 - 3-phosphoshikimate 1-carboxyvinyltransferase 190 65.33 0 214271..214945 - 224 91974672 - RPD_0190 - hypothetical protein 191 68.08 0 215116..215754 + 212 91974673 - RPD_0191 - cytidylate kinase 192 63.02 0 216049..217746 + 565 91974674 rpsA RPD_0192 - 30S ribosomal protein S1 193 66.36 0 217997..218977 + 326 91974675 - RPD_0193 - signal peptide peptidase SppA, 36K type 194 60.78 -1 219124..219429 + 101 91974676 ihfB RPD_0194 - integration host factor subunit beta 195 66.43 0 219442..219855 + 137 91974677 - RPD_0195 - hypothetical protein 196 68.19 0 219911..220567 + 218 91974678 - RPD_0196 - N-(5'-phosphoribosyl)anthranilate isomerase 197 65.27 0 220569..221783 + 404 91974679 - RPD_0197 - tryptophan synthase subunit beta 198 67.62 0 221783..222619 + 278 91974680 trpA RPD_0198 - tryptophan synthase subunit alpha 199 64.91 0 222727..223695 + 322 91974681 - RPD_0199 - acetyl-CoA carboxylase subunit beta 200 68.89 +1 223692..225038 + 448 91974682 - RPD_0200 - FolC bifunctional protein 201 63.24 0 225390..225710 - 106 91974683 - RPD_0201 - thioredoxin 202 68.25 0 225807..229286 - 1159 91974684 - RPD_0202 - UvrD/REP helicase 203 69.37 +1 229283..232432 - 1049 91974685 - RPD_0203 - hypothetical protein 204 66.28 0 232504..233277 - 257 91974686 - RPD_0204 - nucleotidyl transferase 205 63.81 0 233402..233716 - 104 91974687 - RPD_0205 - hypothetical protein 206 68.58 +1 233930..235447 - 505 91974688 - RPD_0206 - hypothetical protein 207 66.27 0 235444..237957 - 837 91974689 - RPD_0207 - PAS/PAC sensor signal transduction histidine kinase 208 67.54 0 238137..238595 - 152 91974690 - RPD_0208 - deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 209 67.12 0 238592..240127 - 511 91974691 - RPD_0209 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 210 68.06 0 240150..241724 - 524 91974692 - RPD_0210 - 2-polyprenylphenol 6-hydroxylase 211 63.25 0 241721..242482 - 253 91974693 ubiE RPD_0211 - ubiquinone/menaquinone biosynthesis methyltransferase 212 68.59 +1 242693..243574 + 293 91974694 - RPD_0212 - formamidopyrimidine-DNA glycosylase 213 64.80 0 243743..244705 - 320 91974695 - RPD_0213 - transposase, IS4 214 68.72 +1 245415..246779 - 454 91974696 - RPD_0214 - peptidoglycan binding domain-containing protein 215 69.79 +1 246901..247701 + 266 91974697 - RPD_0215 - UBA/THIF-type NAD/FAD binding fold 216 64.80 0 247862..248824 - 320 91974698 - RPD_0216 - transposase, IS4 217 66.27 0 249040..250041 - 333 91974699 - RPD_0217 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 218 66.10 0 250275..250799 + 174 91974700 - RPD_0218 - hypothetical protein 219 61.96 0 251081..251569 - 162 91974701 - RPD_0219 - ferric-uptake regulator 220 63.83 0 251784..252347 + 187 91974702 - RPD_0220 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 221 66.34 0 252427..253653 + 408 91974703 - RPD_0221 - 3-oxoacyl-(acyl carrier protein) synthase I 222 65.25 0 253850..254695 + 281 91974704 - RPD_0222 - enoyl-(acyl carrier protein) reductase 223 66.80 0 255039..257237 - 732 91974705 - RPD_0223 - catalase/peroxidase HPI 224 70.29 +1 257482..258420 + 312 91974706 - RPD_0224 - LysR family transcriptional regulator 225 62.98 0 258512..260194 - 560 91974707 - RPD_0225 - methyl-accepting chemotaxis protein 226 62.87 0 260510..262195 - 561 91974708 - RPD_0226 - methyl-accepting chemotaxis protein 227 65.42 0 262822..264990 - 722 91974709 - RPD_0227 - polynucleotide phosphorylase/polyadenylase 228 58.52 -1 265334..265603 - 89 91974710 rpsO RPD_0228 - 30S ribosomal protein S15 229 67.30 0 265606..266712 - 368 91974711 truB RPD_0229 - tRNA pseudouridine synthase B 230 65.69 0 266712..267122 - 136 91974712 rbfA RPD_0230 - ribosome-binding factor A 231 68.59 +1 267294..269945 - 883 91974713 infB RPD_0231 - translation initiation factor IF-2 232 64.28 0 269938..270732 - 264 91974714 - RPD_0232 - hypothetical protein 233 65.74 0 270895..272517 - 540 91974715 nusA RPD_0233 - transcription elongation factor NusA 234 68.19 0 272520..273308 - 262 91974716 - RPD_0234 - hypothetical protein 235 68.97 +1 273587..274672 + 361 91974717 - RPD_0235 - hypothetical protein 236 61.48 -1 274805..275575 - 256 91974718 trmB RPD_0236 - tRNA (guanine-N(7))-methyltransferase 237 60.71 -1 275694..276113 - 139 91974719 - RPD_0237 - XRE family transcriptional regulator 238 64.87 0 276304..277914 - 536 91974720 lnt RPD_0238 - apolipoprotein N-acyltransferase 239 66.93 0 277926..279053 - 375 91974721 - RPD_0239 - HlyC/CorC family transporters 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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