version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1768 63.92 0 1987483..1988247 + 254 91976250 - RPD_1772 - calcium-binding EF-hand 1769 69.48 +1 1988306..1989301 - 331 91976251 - RPD_1773 - peptidase S58, DmpA 1770 66.80 0 1989476..1990210 + 244 91976252 - RPD_1774 - cytochrome c biogenesis protein, transmembrane region 1771 62.71 0 1990434..1991546 - 370 91976253 - RPD_1775 - extracellular ligand-binding receptor 1772 67.76 0 1991710..1992444 - 244 91976254 - RPD_1776 - ABC transporter related 1773 65.00 0 1992441..1993280 - 279 91976255 - RPD_1777 - ABC transporter related 1774 65.62 0 1993277..1994611 - 444 91976256 - RPD_1778 - inner-membrane translocator 1775 62.85 0 1994612..1995529 - 305 91976257 - RPD_1779 - inner-membrane translocator 1776 63.83 0 1996046..1996573 + 175 91976258 - RPD_1780 - hypothetical protein 1777 63.64 0 1996778..1997239 + 153 91976259 - RPD_1781 - carbon monoxide dehydrogenase subunit G 1778 64.06 0 1997401..1997898 + 165 91976260 - RPD_1782 - (2Fe-2S)-binding 1779 65.18 0 1997955..1998761 + 268 91976261 - RPD_1783 - molybdopterin dehydrogenase, FAD-binding 1780 66.12 0 1998809..1999717 + 302 91976262 - RPD_1784 - ATPase 1781 66.75 0 1999861..2001105 + 414 91976263 - RPD_1785 - VWA containing CoxE-like 1782 68.83 +1 2001132..2001455 + 107 91976264 - RPD_1786 - hypothetical protein 1783 68.23 0 2001493..2002194 + 233 91976265 - RPD_1787 - xanthine dehydrogenase accessory factor 1784 69.41 +1 2002191..2003792 + 533 91976266 - RPD_1788 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1785 65.34 0 2003920..2004297 + 125 91976267 - RPD_1789 - hypothetical protein 1786 66.67 0 2004439..2004624 - 61 91976268 - RPD_1790 - hypothetical protein 1787 66.94 0 2004772..2005512 + 246 91976269 - RPD_1791 - regulatory protein, TetR 1788 65.92 0 2005509..2006309 + 266 91976270 - RPD_1792 - putative efflux protein 1789 65.71 0 2006306..2007247 + 313 91976271 - RPD_1793 - ABC transporter related 1790 64.11 0 2007244..2008416 + 390 91976272 - RPD_1794 - hypothetical protein 1791 64.78 0 2008445..2009767 + 440 91976273 - RPD_1795 - adenylyl cyclase class-3/4/guanylyl cyclase 1792 65.27 0 2009824..2010537 - 237 91976274 - RPD_1796 - hypothetical protein 1793 60.42 -1 2011025..2011264 - 79 91976275 - RPD_1797 - hypothetical protein 1794 65.15 0 2011383..2011844 - 153 91976276 - RPD_1798 - hypothetical protein 1795 61.44 -1 2011873..2012676 - 267 91976277 - RPD_1799 - hypothetical protein 1796 65.52 0 2013010..2014143 + 377 91976278 - RPD_1800 - dolichyl-phosphate beta-D-mannosyltransferase 1797 68.47 +1 2014151..2015644 + 497 91976279 - RPD_1801 - glycosyl transferase family protein 1798 66.17 0 2015783..2017000 + 405 91976280 - RPD_1802 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1799 64.95 0 2017019..2018008 - 329 91976281 - RPD_1803 - hypothetical protein 1800 67.47 0 2018072..2018818 - 248 91976282 - RPD_1804 - hypothetical protein 1801 63.64 0 2019205..2020161 - 318 91976283 - RPD_1805 - PfkB 1802 69.14 +1 2020517..2021407 + 296 91976284 - RPD_1806 - glyoxalase/bleomycin resistance protein/dioxygenase 1803 66.34 0 2021461..2022678 - 405 91976285 - RPD_1807 - cytochrome P450 1804 61.54 0 2022945..2023646 + 233 91976286 - RPD_1808 - TetR family transcriptional regulator 1805 66.50 0 2023647..2024840 + 397 91976287 - RPD_1809 - secretion protein HlyD 1806 63.54 0 2024981..2028085 + 1034 91976288 - RPD_1810 - acriflavin resistance protein 1807 66.26 0 2028212..2029186 - 324 91976289 - RPD_1811 - oligopeptide/dipeptide ABC transporter, ATP-binding protein-like 1808 69.10 +1 2029183..2030169 - 328 91976290 - RPD_1812 - oligopeptide/dipeptide ABC transporter, ATP-binding protein-like 1809 67.08 0 2030186..2031145 - 319 91976291 - RPD_1813 - binding-protein-dependent transport systems inner membrane component 1810 65.14 0 2031157..2032137 - 326 91976292 - RPD_1814 - binding-protein-dependent transport systems inner membrane component 1811 61.91 0 2032173..2033771 - 532 91976293 - RPD_1815 - extracellular solute-binding protein 1812 67.46 0 2033941..2035194 + 417 91976294 - RPD_1816 - D-amino-acid dehydrogenase 1813 57.65 -2 2035421..2035675 + 84 91976295 - RPD_1817 - hypothetical protein 1814 68.06 0 2035694..2036482 + 262 91976296 - RPD_1818 - hypothetical protein 1815 66.16 0 2036496..2037491 + 331 91976297 - RPD_1819 - alpha/beta hydrolase fold 1816 67.04 0 2037686..2040913 + 1075 91976298 - RPD_1820 - cytochrome P450 1817 66.96 0 2040933..2041271 + 112 91976299 - RPD_1821 - hypothetical protein 1818 60.83 -1 2041523..2042002 + 159 91976300 - RPD_1822 - phasin 2 1819 65.47 0 2042156..2042824 - 222 91976301 - RPD_1823 - TetR family transcriptional regulator 1820 65.75 0 2042952..2043935 + 327 91976302 - RPD_1824 - phenylacetate-CoA oxygenase subunit PaaA 1821 64.58 0 2043966..2044253 + 95 91976303 - RPD_1825 - phenylacetate-CoA oxygenase subunit PaaB 1822 66.41 0 2044367..2045143 + 258 91976304 - RPD_1826 - phenylacetate-CoA oxygenase, PaaI subunit 1823 66.87 0 2045140..2045640 + 166 91976305 - RPD_1827 - phenylacetate-CoA oxygenase, PaaJ subunit 1824 67.03 0 2045657..2046745 + 362 91976306 - RPD_1828 - phenylacetate-CoA oxygenase/reductase, PaaK subunit 1825 66.59 0 2047034..2048368 - 444 91976307 - RPD_1829 - phenylacetate-CoA ligase 1826 68.43 0 2048383..2048835 - 150 91976308 - RPD_1830 - phenylacetic acid degradation protein PaaD 1827 70.23 +1 2048838..2049623 - 261 91976309 - RPD_1831 - enoyl-CoA hydratase 1828 68.68 +1 2049781..2051817 + 678 91976310 - RPD_1832 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 1829 68.85 +1 2051953..2052318 - 121 91976311 - RPD_1833 - hypothetical protein 1830 65.84 0 2052464..2053429 - 321 91976312 - RPD_1834 - fatty acid desaturase 1831 67.24 0 2053478..2054701 - 407 91976313 - RPD_1835 - OsmC-like protein 1832 62.75 0 2054802..2056001 - 399 91976314 - RPD_1836 - cytochrome P450 1833 59.05 -1 2056097..2056306 - 69 91976315 - RPD_1837 - putative ferredoxin 1834 67.64 0 2056439..2057872 - 477 91976316 - RPD_1838 - amidase 1835 63.16 0 2058007..2059119 + 370 91976317 - RPD_1839 - ABC transporter-like 1836 64.34 0 2059175..2060551 - 458 91976318 - RPD_1840 - Beta-glucosidase 1837 61.79 0 2060790..2061917 + 375 91976319 - RPD_1841 - tartrate dehydrogenase 1838 67.36 0 2061986..2062855 - 289 91976320 - RPD_1842 - hypothetical protein 1839 66.56 0 2062989..2063903 - 304 91976321 - RPD_1843 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1840 67.39 0 2063932..2065179 - 415 91976322 - RPD_1844 - allantoate amidohydrolase 1841 65.08 0 2065249..2066196 - 315 91976323 - RPD_1845 - LysR family transcriptional regulator 1842 64.10 0 2066314..2067132 + 272 91976324 - RPD_1846 - hypothetical protein 1843 62.83 0 2067189..2068439 + 416 91976325 - RPD_1847 - twin-arginine translocation pathway signal 1844 61.89 0 2068571..2069449 + 292 91976326 - RPD_1848 - inner-membrane translocator 1845 63.53 0 2069449..2070435 + 328 91976327 - RPD_1849 - inner-membrane translocator 1846 65.85 0 2070432..2071166 + 244 91976328 - RPD_1850 - ABC transporter related 1847 64.40 0 2071150..2071854 + 234 91976329 - RPD_1851 - ABC transporter related 1848 68.02 0 2072295..2072957 - 220 91976330 - RPD_1853 - putative aldolase 1849 66.45 0 2073048..2073962 + 304 91976331 - RPD_1854 - 3-hydroxyisobutyrate dehydrogenase 1850 62.45 0 2073983..2074765 + 260 91976332 - RPD_1855 - hydroxypyruvate isomerase 1851 64.87 0 2074762..2076039 + 425 91976333 - RPD_1856 - type III effector Hrp-dependent outers 1852 62.88 0 2076248..2077939 + 563 91976334 - RPD_1857 - chemotaxis sensory transducer 1853 67.59 0 2078123..2079634 - 503 91976335 - RPD_1858 - acetyl-CoA acetyltransferase 1854 66.31 0 2079765..2080898 - 377 91976336 - RPD_1859 - 2-nitropropane dioxygenase, NPD 1855 62.52 0 2081149..2082813 + 554 91976337 - RPD_1860 - FAD dependent oxidoreductase 1856 64.11 0 2082943..2083764 - 273 91976338 - RPD_1861 - short-chain dehydrogenase/reductase SDR 1857 62.80 0 2083888..2084688 + 266 91976339 - RPD_1862 - enoyl-CoA hydratase 1858 65.15 0 2084695..2085684 + 329 91976340 - RPD_1863 - aminoglycoside phosphotransferase 1859 61.07 -1 2085755..2086129 + 124 91976341 - RPD_1864 - hypothetical protein 1860 68.08 0 2086258..2087037 - 259 91976342 - RPD_1865 - enoyl-CoA hydratase 1861 61.17 -1 2087092..2088438 + 448 91976343 - RPD_1866 - acyl-CoA dehydrogenase-like 1862 61.86 0 2088617..2090761 - 714 91976344 - RPD_1867 - chemotaxis sensory transducer 1863 64.83 0 2091167..2092744 - 525 91976345 - RPD_1868 - acyl-CoA synthetase 1864 64.26 0 2092970..2093842 - 290 91976346 - RPD_1869 - short-chain dehydrogenase/reductase SDR 1865 66.67 0 2093958..2094770 + 270 91976347 - RPD_1870 - enoyl-CoA hydratase 1866 64.70 0 2094920..2096494 + 524 91976348 - RPD_1871 - acyl-CoA synthetase 1867 64.11 0 2096442..2099252 - 936 91976349 - RPD_1872 - sensor histidine kinase 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0