version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1220 66.30 0 1382415..1383515 + 366 91975702 - RPD_1222 - hypothetical protein 1221 57.05 -2 1384027..1384182 + 51 91975703 - RPD_1223 - hypothetical protein 1222 66.18 0 1384273..1387356 + 1027 91975704 - RPD_1224 - pyruvate phosphate dikinase 1223 66.81 0 1387746..1389170 + 474 91975705 - RPD_1225 - cell wall hydrolase, SleB 1224 65.11 0 1389439..1390401 - 320 91975706 - RPD_1226 - transposase, IS4 1225 68.61 +1 1390534..1391409 - 291 91975707 - RPD_1227 - nicotinate-nucleotide pyrophosphorylase 1226 72.22 +2 1391442..1393061 - 539 91975708 - RPD_1228 - L-aspartate oxidase 1227 65.14 0 1393174..1394286 - 370 91975709 - RPD_1229 - quinolinate synthetase 1228 67.27 0 1394627..1395613 + 328 91975710 - RPD_1230 - zinc-binding alcohol dehydrogenase 1229 67.68 0 1395713..1396306 + 197 91975711 - RPD_1231 - hypothetical protein 1230 70.52 +1 1396342..1399041 - 899 91975712 - RPD_1232 - hypothetical protein 1231 67.79 0 1399096..1400076 - 326 91975713 - RPD_1233 - hypothetical protein 1232 68.64 +1 1400090..1400596 - 168 91975714 - RPD_1234 - hypothetical protein 1233 67.31 0 1400705..1401328 - 207 91975715 - RPD_1235 - metal-dependent phosphohydrolase 1234 61.40 -1 1401607..1401777 + 56 91975716 - RPD_1236 - hypothetical protein 1235 63.15 0 1401768..1402421 - 217 91975717 - RPD_1237 - DNA-3-methyladenine glycosylase I 1236 68.93 +1 1402418..1403299 - 293 91975718 - RPD_1238 - glycine cleavage T protein (aminomethyl transferase) 1237 67.72 0 1403417..1404751 + 444 91975719 - RPD_1239 - dihydroorotase 1238 61.54 0 1405025..1405180 + 51 91975720 - RPD_1240 - hypothetical protein 1239 65.15 0 1405284..1405547 - 87 91975721 - RPD_1241 - hypothetical protein 1240 67.18 0 1405679..1406068 - 129 91975722 - RPD_1242 - hypothetical protein 1241 71.36 +1 1406130..1406555 - 141 91975723 - RPD_1243 - NUDIX hydrolase 1242 65.10 0 1406561..1407070 - 169 91975724 - RPD_1244 - hypothetical protein 1243 65.00 0 1407132..1407911 + 259 91975725 - RPD_1245 - hypothetical protein 1244 67.41 0 1407976..1409445 - 489 91975726 - RPD_1246 - FAD linked oxidase-like 1245 74.22 +2 1409492..1410484 - 330 91975727 - RPD_1247 - Sua5/YciO/YrdC/YwlC 1246 62.42 0 1410878..1412149 - 423 91975728 - RPD_1248 - acyl-CoA dehydrogenase-like 1247 63.06 0 1412581..1413300 + 239 91975729 - RPD_1249 - aspartate racemase 1248 66.67 0 1413317..1414336 + 339 91975730 - RPD_1250 - zinc-binding alcohol dehydrogenase 1249 65.69 0 1414333..1414743 + 136 91975731 - RPD_1251 - phenylacetic acid degradation-related protein 1250 66.80 0 1414771..1415532 + 253 91975732 - RPD_1252 - short-chain dehydrogenase/reductase SDR 1251 59.57 -1 1415713..1416177 + 154 91975733 - RPD_1253 - regulatory proteins, AsnC/Lrp 1252 64.80 0 1416245..1417528 + 427 91975734 - RPD_1254 - ABC-type branched-chain amino acid transport systems, periplasmic component 1253 66.80 0 1417710..1419230 + 506 91975735 - RPD_1255 - AMP-dependent synthetase and ligase 1254 65.03 0 1419473..1419778 + 101 91975736 - RPD_1256 - hypothetical protein 1255 69.64 +1 1419930..1420970 - 346 91975737 - RPD_1257 - aminotransferase, class I and II 1256 64.54 0 1420967..1421107 - 46 91975738 - RPD_1258 - hypothetical protein 1257 62.45 0 1421369..1421605 + 78 91975739 - RPD_1259 - hypothetical protein 1258 69.55 +1 1421688..1422380 + 230 91975740 - RPD_1260 - Crp/Fnr family transcriptional regulator 1259 66.15 0 1422480..1422671 + 63 91975741 - RPD_1261 - hypothetical protein 1260 65.88 0 1422747..1423127 + 126 91975742 - RPD_1262 - alkylhydroperoxidase AhpD core 1261 65.68 0 1423180..1424289 + 369 91975743 - RPD_1263 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1262 64.94 0 1424347..1425561 + 404 91975744 - RPD_1264 - acyl-CoA dehydrogenase-like 1263 66.88 0 1425749..1426681 + 310 91975745 - RPD_1265 - beta-lactamase-like 1264 68.79 +1 1426939..1427832 - 297 91975746 - RPD_1266 - hypothetical protein 1265 63.23 0 1428144..1429772 - 542 91975747 - RPD_1267 - putative acyl-CoA synthetase 1266 73.44 +2 1429890..1430849 + 319 91975748 - RPD_1268 - extensin-like 1267 63.56 0 1430936..1431610 - 224 91975749 - RPD_1269 - ErfK/YbiS/YcfS/YnhG 1268 64.93 0 1431944..1432924 + 326 91975750 - RPD_1270 - Mg2+ transporter protein, CorA-like 1269 59.09 -1 1433115..1433444 - 109 91975751 - RPD_1271 - hypothetical protein 1270 68.23 0 1434525..1434971 - 148 91975752 - RPD_1272 - CMP/dCMP deaminase, zinc-binding 1271 71.02 +1 1435147..1437534 + 795 91975753 - RPD_1273 - pseudouridine synthase Rsu 1272 67.03 0 1437537..1438094 + 185 91975754 - RPD_1274 - hypothetical protein 1273 64.37 0 1438266..1439222 - 318 91975755 - RPD_1275 - regulatory protein, LuxR 1274 62.35 0 1439350..1440462 - 370 91975756 - RPD_1276 - histone deacetylase superfamily protein 1275 65.86 0 1440745..1441737 - 330 91975757 - RPD_1277 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1276 66.88 0 1441737..1442204 - 155 91975758 - RPD_1278 - molybdopterin biosynthesis MoaE 1277 66.67 0 1442229..1442480 - 83 91975759 - RPD_1279 - molybdopterin converting factor, subunit 1 1278 63.36 0 1442477..1443142 - 221 91975760 - RPD_1280 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1279 67.43 0 1443237..1445324 - 695 91975761 uvrC RPD_1281 - excinuclease ABC subunit C 1280 61.70 0 1445629..1446252 + 207 91975762 - RPD_1282 - putative outer membrane protein 1281 52.11 -2 1446505..1446717 - 70 91975763 - RPD_1283 - cold-shock DNA-binding domain protein 1282 65.73 0 1446976..1447833 - 285 91975764 - RPD_1284 - hypothetical protein 1283 57.32 -2 1448264..1448659 + 131 91975765 - RPD_1285 - response regulator receiver 1284 65.50 0 1448863..1449717 - 284 91975766 - RPD_1286 - HAD family hydrolase 1285 68.16 0 1449730..1451202 - 490 91975767 - RPD_1287 - putative cylclic diguanylate phosphodiesterase 1286 66.30 0 1451300..1452646 - 448 91975768 - RPD_1288 - beta alanine--pyruvate transaminase 1287 62.03 0 1452863..1454458 + 531 91975769 hisS RPD_1289 - histidyl-tRNA synthetase 1288 61.76 0 1454653..1454856 + 67 91975770 - RPD_1290 - 4-oxalocrotonate tautomerase 1289 63.78 0 1455026..1455475 + 149 91975771 - RPD_1291 - hypothetical protein 1290 67.68 0 1455472..1457535 - 687 91975772 - RPD_1292 - hypothetical protein 1291 70.21 +1 1457682..1460507 - 941 91975773 - RPD_1293 - double-transmembrane region-like 1292 68.58 +1 1460504..1461442 - 312 91975774 - RPD_1294 - hypothetical protein 1293 67.66 0 1461442..1462446 - 334 91975775 - RPD_1295 - ATPase 1294 63.07 0 1462698..1463309 + 203 91975776 - RPD_1296 - hypothetical protein 1295 64.50 0 1463359..1464003 + 214 91975777 - RPD_1297 - NUDIX hydrolase 1296 61.74 0 1464000..1464263 + 87 91975778 - RPD_1298 - hypothetical protein 1297 70.81 +1 1464260..1465513 + 417 91975779 - RPD_1299 - polynucleotide adenylyltransferase region 1298 65.40 0 1465520..1466152 - 210 91975780 - RPD_1300 - hypothetical protein 1299 57.84 -2 1466166..1466618 - 150 91975781 - RPD_1301 - tRNA/rRNA methyltransferase (SpoU) 1300 62.12 0 1466896..1467423 + 175 91975782 - RPD_1302 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 1301 62.37 0 1467464..1469533 + 689 91975783 - RPD_1303 - cytochrome c1 1302 64.30 0 1469698..1470372 + 224 91975784 - RPD_1304 - carboxymethylenebutenolidase 1303 62.61 0 1470463..1470684 + 73 91975785 - RPD_1305 - hypothetical protein 1304 65.83 0 1470756..1471475 - 239 91975786 - RPD_1306 - short-chain dehydrogenase/reductase SDR 1305 61.82 0 1471529..1472167 - 212 91975787 - RPD_1307 - pyridoxamine 5'-phosphate oxidase 1306 63.99 0 1472288..1472698 + 136 91975788 - RPD_1308 - hypothetical protein 1307 67.18 0 1472809..1473780 + 323 91975789 - RPD_1309 - chaperone DnaJ-like 1308 68.59 +1 1474030..1474809 - 259 91975790 - RPD_1310 - hypothetical protein 1309 68.46 +1 1474831..1475388 - 185 91975791 - RPD_1311 - sigma-70, region 4 type 2 1310 62.88 0 1475523..1476341 + 272 91975792 - RPD_1312 - enoyl-(acyl carrier protein) reductase 1311 68.97 +1 1476458..1477066 + 202 91975793 - RPD_1313 - phosphoglycerate mutase 1312 67.31 0 1477174..1478259 + 361 91975794 - RPD_1314 - chorismate synthase 1313 61.11 -1 1478343..1478648 - 101 91975795 clpS RPD_1315 - ATP-dependent Clp protease adaptor 1314 63.59 0 1478872..1479717 + 281 91975796 - RPD_1316 - hypothetical protein 1315 66.45 0 1479825..1481228 - 467 91975797 - RPD_1317 - carotenoid oxygenase 1316 67.54 0 1481266..1482642 - 458 91975798 - RPD_1318 - hypothetical protein 1317 67.03 0 1482635..1483744 - 369 91975799 - RPD_1319 - hypothetical protein 1318 66.19 0 1483760..1484812 - 350 91975800 - RPD_1320 - hypothetical protein 1319 60.26 -1 1484969..1485952 - 327 91975801 - RPD_1321 - alpha/beta hydrolase fold 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0