version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1099 67.98 0 1249468..1251147 + 559 91975581 - RPD_1101 - acetolactate synthase 2 catalytic subunit 1100 65.18 0 1251875..1252747 - 290 91975582 - RPD_1102 - aminotransferase 1101 66.19 0 1252825..1254717 - 630 91975583 - RPD_1103 - acyl-CoA synthetase 1102 64.14 0 1254918..1256222 + 434 91975584 - RPD_1104 - O-acetylhomoserine/O-acetylserine sulfhydrylase 1103 66.37 0 1256238..1257239 + 333 91975585 - RPD_1105 - homoserine O-succinyltransferase 1104 67.05 0 1257236..1257757 + 173 91975586 - RPD_1106 - flavin reductase-like, FMN-binding 1105 64.45 0 1257847..1259199 - 450 91975587 - RPD_1107 - putative membrane protein involved in export of O-antigen 1106 67.78 0 1259464..1259823 + 119 91975588 - RPD_1108 - hypothetical protein 1107 65.48 0 1259840..1261360 - 506 91975589 - RPD_1109 - hypothetical protein 1108 66.35 0 1261350..1262609 - 419 91975590 - RPD_1110 - glycosyl transferase, group 1 1109 66.81 0 1262993..1265059 + 688 91975591 - RPD_1111 - lipopolysaccharide biosynthesis 1110 61.43 -1 1265056..1266393 + 445 91975592 - RPD_1112 - hypothetical protein 1111 64.17 0 1266403..1267725 + 440 91975593 - RPD_1113 - glycoside hydrolase family protein 1112 64.50 0 1267829..1268749 - 306 91975594 - RPD_1114 - WecB/TagA/CpsF family glycosyl transferase 1113 66.67 0 1268995..1269975 - 326 91975595 - RPD_1115 - UDP-glucose 4-epimerase 1114 64.01 0 1270021..1271262 - 413 91975596 - RPD_1116 - hypothetical protein 1115 66.98 0 1271529..1272494 + 321 91975597 - RPD_1117 - PDZ/DHR/GLGF 1116 62.96 0 1272545..1273624 - 359 91975598 - RPD_1118 - basic membrane lipoprotein 1117 71.46 +1 1273702..1274619 - 305 91975599 - RPD_1119 - inner-membrane translocator 1118 66.48 0 1274606..1275697 - 363 91975600 - RPD_1120 - inner-membrane translocator 1119 69.14 +1 1275681..1277300 - 539 91975601 - RPD_1121 - ABC transporter related 1120 66.32 0 1277407..1277691 + 94 91975602 - RPD_1122 - hypothetical protein 1121 69.72 +1 1277927..1278352 + 141 91975603 - RPD_1123 - BA14K-like 1122 65.80 0 1278477..1279868 - 463 91975604 - RPD_1124 - hypothetical protein 1123 60.00 -1 1280398..1281267 + 289 91975605 - RPD_1125 - hypothetical protein 1124 66.28 0 1281378..1282154 + 258 91975606 - RPD_1126 - enoyl-(acyl carrier protein) reductase 1125 68.92 +1 1282175..1283593 + 472 91975607 - RPD_1127 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 1126 69.65 +1 1283590..1284795 + 401 91975608 - RPD_1128 - acetate kinase 1127 68.12 0 1284874..1285833 - 319 91975609 - RPD_1129 - phenylacetic acid degradation-related protein 1128 68.55 +1 1285923..1286240 + 105 91975610 - RPD_1130 - hypothetical protein 1129 68.15 0 1286377..1287117 + 246 91975611 - RPD_1131 - nuclease (SNase-like) 1130 69.18 +1 1287132..1287926 - 264 91975612 - RPD_1132 - enoyl-CoA hydratase/isomerase 1131 66.09 0 1288095..1289651 + 518 91975613 - RPD_1133 - AMP-dependent synthetase and ligase 1132 70.70 +1 1289667..1290608 - 313 91975614 - RPD_1134 - regulatory proteins, IclR 1133 67.70 0 1290742..1291614 + 290 91975615 - RPD_1135 - MaoC-like dehydratase 1134 63.78 0 1291840..1293084 + 414 91975616 - RPD_1136 - twin-arginine translocation pathway signal 1135 65.00 0 1293092..1293811 + 239 91975617 - RPD_1137 - ABC transporter related 1136 66.81 0 1293804..1294508 + 234 91975618 - RPD_1138 - ABC transporter related 1137 63.77 0 1294519..1295382 + 287 91975619 - RPD_1139 - inner-membrane translocator 1138 66.57 0 1295379..1296365 + 328 91975620 - RPD_1140 - inner-membrane translocator 1139 63.58 0 1296521..1297588 - 355 91975621 - RPD_1141 - glycosyl transferase, group 1 1140 63.99 0 1297841..1299598 + 585 91975622 - RPD_1142 - ABC transporter related 1141 64.44 0 1299680..1301878 + 732 91975623 - RPD_1143 - Amylo-alpha-1,6-glucosidase 1142 66.67 0 1301927..1302400 + 157 91975624 - RPD_1144 - PRC-barrel 1143 70.11 +1 1302558..1303718 + 386 91975625 - RPD_1145 - major facilitator transporter 1144 64.43 0 1303783..1304139 + 118 91975626 - RPD_1146 - hypothetical protein 1145 69.00 +1 1304154..1305011 - 285 91975627 - RPD_1147 - hypothetical protein 1146 68.28 0 1305132..1306433 + 433 91975628 - RPD_1148 - FAD dependent oxidoreductase 1147 69.47 +1 1306521..1308161 - 546 91975629 - RPD_1149 - ABC transporter related 1148 66.31 0 1308158..1308988 - 276 91975630 - RPD_1150 - binding-protein-dependent transport systems inner membrane component 1149 66.36 0 1308993..1309970 - 325 91975631 - RPD_1151 - binding-protein-dependent transport systems inner membrane component 1150 64.69 0 1309995..1311611 - 538 91975632 - RPD_1152 - extracellular solute-binding protein 1151 68.95 +1 1311739..1313667 - 642 91975633 - RPD_1153 - Sulfate adenylyltransferase, large subunit 1152 64.73 0 1313744..1314619 - 291 91975634 - RPD_1154 - sulfate adenylyltransferase subunit 2 1153 66.27 0 1314906..1315652 + 248 91975635 - RPD_1155 - phosphoadenosine phosphosulfate reductase 1154 61.31 -1 1315777..1316766 + 329 91975636 - RPD_1156 - thiosulphate-binding protein 1155 65.48 0 1316823..1317662 + 279 91975637 - RPD_1157 - Sulfate ABC transporter, permease protein CysT 1156 64.27 0 1317667..1318584 + 305 91975638 - RPD_1158 - Sulfate ABC transporter, permease protein CysW 1157 68.10 0 1318574..1319620 + 348 91975639 - RPD_1159 - sulphate transport system permease protein 1 1158 70.26 +1 1319752..1320753 + 333 91975640 - RPD_1160 - NADH ubiquinone oxidoreductase, 20 kDa subunit 1159 69.64 +1 1320750..1322195 + 481 91975641 - RPD_1161 - nickel-dependent hydrogenase, large subunit 1160 64.90 0 1322432..1323565 + 377 91975642 - RPD_1162 - hydrogenase (NiFe) small subunit (hydA) 1161 63.88 0 1323584..1325377 + 597 91975643 - RPD_1163 - nickel-dependent hydrogenase, large subunit 1162 60.08 -1 1325400..1326128 + 242 91975644 - RPD_1164 - nickel-dependent hydrogenase b-type cytochrome subunit 1163 65.36 0 1326363..1326974 + 203 91975645 - RPD_1165 - hydrogenase expression/formation protein 1164 74.19 +2 1326987..1327571 + 194 91975646 - RPD_1166 - HupE/UreJ protein 1165 68.98 +1 1327588..1327890 + 100 91975647 - RPD_1167 - hydrogenase assembly chaperone hypC/hupF 1166 69.14 +1 1328118..1328522 + 134 91975648 - RPD_1168 - hydrogenase-1 expression HyaE 1167 69.55 +1 1328519..1329385 + 288 91975649 - RPD_1169 - HupH hydrogenase expression protein 1168 69.48 +1 1329382..1329594 + 70 91975650 - RPD_1170 - rubredoxin-type Fe(Cys)4 protein 1169 72.69 +2 1329584..1330114 + 176 91975651 - RPD_1171 - putative hydrogenase expression/formation protein HupJ 1170 71.43 +1 1330111..1331223 + 370 91975652 - RPD_1172 - coenzyme F420-reducing hydrogenase alpha subunit-like 1171 66.96 0 1331216..1331557 + 113 91975653 - RPD_1173 - hydrogenase nickel insertion protein HypA 1172 65.60 0 1331557..1332495 + 312 91975654 - RPD_1174 - hydrogenase accessory protein HypB 1173 71.20 +1 1332500..1334791 + 763 91975655 - RPD_1175 - (NiFe) hydrogenase maturation protein HypF 1174 67.61 0 1334788..1335000 + 70 91975656 - RPD_1176 - hydrogenase assembly chaperone hypC/hupF 1175 67.63 0 1334997..1336139 + 380 91975657 - RPD_1177 - hydrogenase expression/formation protein HypD 1176 67.62 0 1336136..1337182 + 348 91975658 - RPD_1178 - hydrogenase expression/formation protein HypE 1177 65.49 0 1337223..1338671 + 482 91975659 - RPD_1179 - sigma-54 factor, interaction region 1178 67.70 0 1338661..1340016 + 451 91975660 - RPD_1180 - ATP-binding region, ATPase-like 1179 67.11 0 1340161..1341063 - 300 91975661 - RPD_1181 - alpha/beta hydrolase fold 1180 65.48 0 1341241..1341663 + 140 91975662 - RPD_1182 - regulatory protein, ArsR 1181 66.94 0 1341677..1342045 - 122 91975663 - RPD_1183 - rhodanese-like protein 1182 65.51 0 1342068..1343195 - 375 91975664 - RPD_1184 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1183 65.20 0 1343406..1344020 + 204 91975665 - RPD_1185 - methyltransferase type 11 1184 64.12 0 1344043..1344435 - 130 91975666 - RPD_1186 - nitrogenase-associated protein 1185 69.90 +1 1344452..1345039 - 195 91975667 - RPD_1187 - hypothetical protein 1186 69.29 +1 1345275..1346150 + 291 91975668 - RPD_1188 - modD protein 1187 66.79 0 1346359..1348005 - 548 91975669 - RPD_1189 - AMP-dependent synthetase and ligase 1188 67.15 0 1348248..1348454 + 68 91975670 - RPD_1190 - hypothetical protein 1189 69.81 +1 1348545..1349180 + 211 91975671 - RPD_1191 - NUDIX hydrolase 1190 65.59 0 1349269..1349547 - 92 91975672 - RPD_1192 - hypothetical protein 1191 71.75 +1 1349756..1350739 - 327 91975673 - RPD_1193 - hypothetical protein 1192 69.70 +1 1350963..1354427 - 1154 91975674 - RPD_1194 - chromosome segregation protein SMC 1193 58.94 -1 1354860..1355066 + 68 91975675 - RPD_1195 - plasmid maintenance system antidote protein-like 1194 61.79 0 1355424..1355792 - 122 91975676 - RPD_1196 - small multidrug resistance protein 1195 63.23 0 1355843..1356511 - 222 91975677 - RPD_1197 - twin-arginine translocation pathway signal 1196 70.88 +1 1356649..1357146 - 165 91975678 - RPD_1198 - hypothetical protein 1197 70.20 +1 1357166..1358296 + 376 91975679 - RPD_1199 - A/G-specific adenine glycosylase 1198 64.46 0 1358425..1359558 - 377 91975680 - RPD_1200 - DNA methylase N-4/N-6 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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