version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1032 66.39 0 1185127..1186206 + 359 91975514 - RPD_1034 - spermidine/putrescine ABC transporter ATP-binding subunit 1033 67.27 0 1186203..1187873 + 556 91975515 - RPD_1035 - FAD dependent oxidoreductase 1034 66.60 0 1187873..1189414 + 513 91975516 - RPD_1036 - FAD linked oxidase-like 1035 69.16 +1 1189411..1190853 + 480 91975517 - RPD_1037 - carbohydrate kinase, FGGY 1036 64.47 0 1191002..1191637 + 211 91975518 - RPD_1038 - regulatory protein, TetR 1037 65.76 0 1191683..1192561 - 292 91975519 - RPD_1039 - short-chain dehydrogenase/reductase SDR 1038 67.52 0 1192949..1193650 + 233 91975520 - RPD_1040 - hypothetical protein 1039 62.25 0 1193675..1194172 - 165 91975521 - RPD_1041 - regulatory protein, MarR 1040 68.52 +1 1194277..1195464 + 395 91975522 - RPD_1042 - putative nitrile hydratase regulator 1041 65.81 0 1195621..1197135 + 504 91975523 - RPD_1043 - amidase 1042 65.85 0 1197179..1198036 + 285 91975524 - RPD_1044 - inner-membrane translocator 1043 62.83 0 1198041..1199264 + 407 91975525 - RPD_1045 - twin-arginine translocation pathway signal 1044 64.49 0 1199326..1200384 + 352 91975526 - RPD_1046 - inner-membrane translocator 1045 66.26 0 1200371..1201105 + 244 91975527 - RPD_1047 - ABC transporter related 1046 68.80 +1 1201098..1201799 + 233 91975528 - RPD_1048 - ABC transporter related 1047 69.64 +1 1201968..1203212 + 414 91975529 - RPD_1049 - iron-containing alcohol dehydrogenase 1048 67.24 0 1203422..1204459 + 345 91975530 - RPD_1050 - fructose-1,6-bisphosphatase 1049 61.42 -1 1204488..1205363 + 291 91975531 - RPD_1051 - phosphoribulokinase 1050 67.56 0 1205398..1207413 + 671 91975532 - RPD_1052 - transketolase 1051 64.09 0 1207471..1208556 + 361 91975533 - RPD_1053 - fructose-1,6-bisphosphate aldolase 1052 64.29 0 1208614..1209999 + 461 91975534 - RPD_1054 - ribulose bisphosphate carboxylase 1053 57.91 -2 1210250..1210546 + 98 91975535 - RPD_1055 - hypothetical protein 1054 60.53 -1 1210576..1210803 - 75 91975536 - RPD_1056 - hypothetical protein 1055 63.83 0 1211163..1211444 + 93 91975537 - RPD_1057 - hypothetical protein 1056 64.65 0 1211455..1213335 + 626 91975538 - RPD_1058 - ferrous iron transport protein B 1057 65.38 0 1213345..1214199 - 284 91975539 - RPD_1059 - hypothetical protein 1058 63.47 0 1214455..1215393 + 312 91975540 - RPD_1060 - short-chain dehydrogenase/reductase SDR 1059 62.66 0 1215686..1217434 + 582 91975541 - RPD_1061 - transcriptional regulator NifA 1060 61.54 0 1217618..1217812 + 64 91975542 - RPD_1062 - 4Fe-4S ferredoxin, iron-sulfur binding 1061 64.04 0 1218030..1219589 + 519 91975543 - RPD_1063 - nitrogenase cofactor biosynthesis protein NifB 1062 63.06 0 1219613..1219834 + 73 91975544 - RPD_1064 - 4Fe-4S ferredoxin, iron-sulfur binding 1063 64.43 0 1219844..1220200 + 118 91975545 - RPD_1065 - HesB/YadR/YfhF 1064 64.44 0 1220202..1220741 + 179 91975546 - RPD_1066 - hypothetical protein 1065 65.30 0 1220731..1221537 + 268 91975547 - RPD_1067 - LRV FeS4 cluster 1066 61.33 -1 1221534..1221833 + 99 91975548 - RPD_1068 - NifZ 1067 62.79 0 1221833..1222090 + 85 91975549 - RPD_1069 - hypothetical protein 1068 59.05 -1 1222103..1222312 + 69 91975550 - RPD_1070 - NifT/FixU 1069 62.15 0 1222315..1222602 + 95 91975551 - RPD_1071 - hypothetical protein 1070 65.12 0 1222614..1223516 + 300 91975552 - RPD_1072 - hypothetical protein 1071 64.00 0 1224040..1224939 + 299 91975553 nifH RPD_1073 - nitrogenase reductase 1072 60.79 -1 1225007..1226470 + 487 91975554 - RPD_1074 - nitrogenase molybdenum-iron protein alpha chain 1073 62.02 0 1226508..1228121 + 537 91975555 - RPD_1075 - nitrogenase molybdenum-iron protein beta chain 1074 64.69 0 1228173..1229639 + 488 91975556 - RPD_1076 - nitrogenase MoFe cofactor biosynthesis protein NifE 1075 65.80 0 1229641..1231017 + 458 91975557 - RPD_1077 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 1076 63.66 0 1231064..1231462 + 132 91975558 - RPD_1078 - dinitrogenase iron-molybdenum cofactor biosynthesis 1077 62.39 0 1231464..1231931 + 155 91975559 - RPD_1079 - hypothetical protein 1078 56.52 -2 1231943..1232149 + 68 91975560 - RPD_1080 - hypothetical protein 1079 61.59 0 1232219..1232533 + 104 91975561 - RPD_1081 - 4Fe-4S ferredoxin, iron-sulfur binding 1080 65.68 0 1232570..1233277 + 235 91975562 - RPD_1082 - NifQ 1081 62.62 0 1233688..1234008 + 106 91975563 - RPD_1083 - HesB/YadR/YfhF 1082 66.37 0 1234037..1235032 + 331 91975564 - RPD_1084 - nitrogen-fixing NifU-like 1083 66.75 0 1235029..1236252 + 407 91975565 - RPD_1085 - aminotransferase, class V 1084 67.17 0 1236245..1237429 + 394 91975566 - RPD_1086 - Alpha-isopropylmalate/homocitrate synthase 1085 61.62 0 1237476..1237832 + 118 91975567 nifW RPD_1087 - nitrogenase stabilizing/protective protein 1086 65.37 0 1238139..1238984 + 281 91975568 - RPD_1088 - electron transfer flavoprotein beta-subunit 1087 66.76 0 1239009..1240115 + 368 91975569 - RPD_1089 - electron transfer flavoprotein beta-subunit 1088 61.01 -1 1240127..1241434 + 435 91975570 - RPD_1090 - electron-transferring-flavoprotein dehydrogenase 1089 60.27 -1 1241475..1241771 + 98 91975571 - RPD_1091 - ferredoxin like protein, fixX 1090 63.76 0 1241852..1242436 - 194 91975572 - RPD_1092 - hypothetical protein 1091 63.38 0 1242666..1243121 - 151 91975573 - RPD_1093 - protein of unknown function DUF861, cupin_3 1092 60.44 -1 1243203..1243475 - 90 91975574 - RPD_1094 - hypothetical protein 1093 66.99 0 1243833..1245059 + 408 91975575 - RPD_1095 - acyl-CoA dehydrogenase-like 1094 64.43 0 1245095..1246033 + 312 91975576 - RPD_1096 - hypothetical protein 1095 66.39 0 1246110..1246841 - 243 91975577 - RPD_1097 - short-chain dehydrogenase/reductase SDR 1096 67.39 0 1246834..1248216 - 460 91975578 - RPD_1098 - AMP-dependent synthetase and ligase 1097 58.80 -1 1248203..1248418 - 71 91975579 - RPD_1099 - putative acyl carrier protein 1098 65.30 0 1248553..1249428 + 291 91975580 - RPD_1100 - hypothetical protein 1099 67.98 0 1249468..1251147 + 559 91975581 - RPD_1101 - acetolactate synthase 2 catalytic subunit 1100 65.18 0 1251875..1252747 - 290 91975582 - RPD_1102 - aminotransferase 1101 66.19 0 1252825..1254717 - 630 91975583 - RPD_1103 - acyl-CoA synthetase 1102 64.14 0 1254918..1256222 + 434 91975584 - RPD_1104 - O-acetylhomoserine/O-acetylserine sulfhydrylase 1103 66.37 0 1256238..1257239 + 333 91975585 - RPD_1105 - homoserine O-succinyltransferase 1104 67.05 0 1257236..1257757 + 173 91975586 - RPD_1106 - flavin reductase-like, FMN-binding 1105 64.45 0 1257847..1259199 - 450 91975587 - RPD_1107 - putative membrane protein involved in export of O-antigen 1106 67.78 0 1259464..1259823 + 119 91975588 - RPD_1108 - hypothetical protein 1107 65.48 0 1259840..1261360 - 506 91975589 - RPD_1109 - hypothetical protein 1108 66.35 0 1261350..1262609 - 419 91975590 - RPD_1110 - glycosyl transferase, group 1 1109 66.81 0 1262993..1265059 + 688 91975591 - RPD_1111 - lipopolysaccharide biosynthesis 1110 61.43 -1 1265056..1266393 + 445 91975592 - RPD_1112 - hypothetical protein 1111 64.17 0 1266403..1267725 + 440 91975593 - RPD_1113 - glycoside hydrolase family protein 1112 64.50 0 1267829..1268749 - 306 91975594 - RPD_1114 - WecB/TagA/CpsF family glycosyl transferase 1113 66.67 0 1268995..1269975 - 326 91975595 - RPD_1115 - UDP-glucose 4-epimerase 1114 64.01 0 1270021..1271262 - 413 91975596 - RPD_1116 - hypothetical protein 1115 66.98 0 1271529..1272494 + 321 91975597 - RPD_1117 - PDZ/DHR/GLGF 1116 62.96 0 1272545..1273624 - 359 91975598 - RPD_1118 - basic membrane lipoprotein 1117 71.46 +1 1273702..1274619 - 305 91975599 - RPD_1119 - inner-membrane translocator 1118 66.48 0 1274606..1275697 - 363 91975600 - RPD_1120 - inner-membrane translocator 1119 69.14 +1 1275681..1277300 - 539 91975601 - RPD_1121 - ABC transporter related 1120 66.32 0 1277407..1277691 + 94 91975602 - RPD_1122 - hypothetical protein 1121 69.72 +1 1277927..1278352 + 141 91975603 - RPD_1123 - BA14K-like 1122 65.80 0 1278477..1279868 - 463 91975604 - RPD_1124 - hypothetical protein 1123 60.00 -1 1280398..1281267 + 289 91975605 - RPD_1125 - hypothetical protein 1124 66.28 0 1281378..1282154 + 258 91975606 - RPD_1126 - enoyl-(acyl carrier protein) reductase 1125 68.92 +1 1282175..1283593 + 472 91975607 - RPD_1127 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 1126 69.65 +1 1283590..1284795 + 401 91975608 - RPD_1128 - acetate kinase 1127 68.12 0 1284874..1285833 - 319 91975609 - RPD_1129 - phenylacetic acid degradation-related protein 1128 68.55 +1 1285923..1286240 + 105 91975610 - RPD_1130 - hypothetical protein 1129 68.15 0 1286377..1287117 + 246 91975611 - RPD_1131 - nuclease (SNase-like) 1130 69.18 +1 1287132..1287926 - 264 91975612 - RPD_1132 - enoyl-CoA hydratase/isomerase 1131 66.09 0 1288095..1289651 + 518 91975613 - RPD_1133 - AMP-dependent synthetase and ligase 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0