version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 964 69.59 +1 1093118..1093732 + 204 91975446 - RPD_0966 - hypothetical protein 965 68.32 0 1093705..1094670 - 321 91975447 - RPD_0967 - hypothetical protein 966 64.96 0 1094912..1096666 + 584 91975448 - RPD_0968 - TPR repeat-containing protein 967 67.20 0 1096707..1101167 + 1486 91975449 - RPD_0969 - cytochrome P450-like 968 65.51 0 1101431..1102207 - 258 91975450 - RPD_0970 - hypothetical protein 969 69.08 +1 1102365..1102943 + 192 91975451 - RPD_0971 - sigma-70 region 2 970 68.13 0 1102940..1103692 + 250 91975452 - RPD_0972 - hypothetical protein 971 69.66 +1 1103885..1104619 - 244 91975453 - RPD_0973 - hypothetical protein 972 67.01 0 1104767..1105054 - 95 91975454 - RPD_0974 - hypothetical protein 973 67.70 0 1105259..1106032 - 257 91975455 - RPD_0975 - hypothetical protein 974 65.84 0 1106128..1107099 - 323 91975456 - RPD_0976 - 2-nitropropane dioxygenase, NPD 975 71.67 +1 1107234..1107872 - 212 91975457 - RPD_0977 - hypothetical protein 976 62.54 0 1107916..1108497 - 193 91975458 - RPD_0978 - DedA family protein 977 64.52 0 1108568..1108987 - 139 91975459 - RPD_0979 - phosphoribosyl-ATP pyrophosphohydrolase 978 69.38 +1 1109088..1109492 - 134 91975460 - RPD_0980 - hypothetical protein 979 63.33 0 1109663..1110622 - 319 91975461 - RPD_0981 - oxidoreductase-like 980 65.03 0 1110624..1111478 - 284 91975462 - RPD_0982 - protocatechuate 4,5-dioxygenase subunit beta 981 62.05 0 1111478..1111867 - 129 91975463 - RPD_0983 - protocatechuate 4,5-dioxygenase subunit alpha 982 66.26 0 1111929..1112912 - 327 91975464 - RPD_0984 - amidohydrolase 2 983 65.26 0 1113020..1113232 - 70 91975465 - RPD_0985 - putative dehydrogenase 984 67.67 0 1113232..1113927 - 231 91975466 - RPD_0986 - hypothetical protein 985 62.10 0 1113942..1114970 - 342 91975467 - RPD_0987 - amidohydrolase 2 986 67.96 0 1114980..1116143 - 387 91975468 - RPD_0988 - hypothetical protein 987 68.88 +1 1116246..1117148 - 300 91975469 - RPD_0989 - LysR, substrate-binding 988 66.77 0 1117173..1118171 - 332 91975470 - RPD_0990 - twin-arginine translocation pathway signal 989 67.01 0 1118359..1119522 + 387 91975471 - RPD_0991 - NADH:flavin oxidoreductase/NADH oxidase 990 69.35 +1 1119621..1119992 - 123 91975472 - RPD_0992 - hypothetical protein 991 55.91 -2 1119993..1120271 + 92 91975473 - RPD_0993 - hypothetical protein 992 64.79 0 1120290..1122260 - 656 91975474 - RPD_0994 - chemotaxis sensory transducer 993 66.26 0 1123124..1125094 - 656 91975475 - RPD_0995 - chemotaxis sensory transducer 994 64.49 0 1125728..1126186 + 152 91975476 - RPD_0996 - hypothetical protein 995 64.00 0 1126348..1126947 + 199 91975477 - RPD_0997 - electron transport protein SCO1/SenC 996 70.06 +1 1126892..1128952 - 686 91975478 - RPD_0998 - glycosyl transferase family protein 997 65.68 0 1129029..1129943 + 304 91975479 - RPD_0999 - extracellular solute-binding protein 998 64.96 0 1129985..1131622 + 545 91975480 lysK RPD_1000 - lysyl-tRNA synthetase 999 58.82 -1 1131912..1132166 + 84 91975481 - RPD_1001 - hypothetical protein 1000 70.02 +1 1132406..1133329 - 307 91975482 - RPD_1002 - secretion protein HlyD 1001 69.32 +1 1133479..1136118 - 879 91975483 - RPD_1003 - adenylyl cyclase class-3/4/guanylyl cyclase 1002 70.36 +1 1136218..1138167 - 649 91975484 - RPD_1004 - AsmA 1003 65.79 0 1138441..1139121 + 226 91975485 - RPD_1005 - cyclic nucleotide-binding 1004 66.76 0 1139834..1143010 - 1058 91975486 - RPD_1006 - acriflavin resistance protein 1005 66.56 0 1143010..1143963 - 317 91975487 - RPD_1007 - secretion protein HlyD 1006 62.60 0 1144180..1144818 - 212 91975488 - RPD_1008 - OmpA/MotB 1007 63.39 0 1144956..1146542 - 528 91975489 - RPD_1009 - peptidase C14, caspase catalytic subunit p20 1008 66.67 0 1146560..1147246 + 228 91975490 - RPD_1010 - hypothetical protein 1009 66.67 0 1147362..1149518 - 718 91975491 - RPD_1011 - peptidase C14, caspase catalytic subunit p20 1010 61.93 0 1149700..1150353 - 217 91975492 - RPD_1012 - OmpA/MotB 1011 64.19 0 1150835..1152772 + 645 91975493 - RPD_1013 - Outer membrane autotransporter barrel 1012 65.11 0 1153002..1153514 - 170 91975494 - RPD_1014 - regulatory protein, MarR 1013 66.05 0 1153643..1155265 + 540 91975495 - RPD_1015 - hypothetical protein 1014 65.74 0 1155262..1155477 + 71 91975496 - RPD_1016 - hypothetical protein 1015 63.83 0 1155606..1156556 + 316 91975497 - RPD_1017 - beta-lactamase-like 1016 65.26 0 1156630..1157976 + 448 91975498 - RPD_1018 - homogentisate 1,2-dioxygenase 1017 65.45 0 1157973..1158629 + 218 91975499 - RPD_1019 - maleylacetoacetate isomerase 1018 64.46 0 1158692..1159960 + 422 91975500 - RPD_1020 - fumarylacetoacetase 1019 67.74 0 1160103..1161218 - 371 91975501 - RPD_1021 - L-carnitine dehydratase/bile acid-inducible protein F 1020 66.29 0 1161406..1162206 - 266 91975502 - RPD_1022 - carbon-monoxide dehydrogenase 1021 65.81 0 1162221..1164566 - 781 91975503 - RPD_1023 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1022 61.04 -1 1164668..1165165 - 165 91975504 - RPD_1024 - (2Fe-2S)-binding 1023 67.50 0 1165417..1167462 + 681 91975505 - RPD_1025 - methyl-accepting chemotaxis sensory transducer 1024 64.85 0 1167625..1169109 + 494 91975506 - RPD_1026 - major facilitator transporter 1025 65.56 0 1169106..1169915 + 269 91975507 - RPD_1027 - HAD family hydrolase 1026 64.44 0 1170038..1171522 + 494 91975508 - RPD_1028 - Alpha,alpha-trehalose-phosphate synthase 1027 59.31 -1 1172349..1175543 + 1064 91975509 - RPD_1029 - CRISPR-associated Cas5e family protein 1028 63.33 0 1175519..1176418 + 299 91975510 - RPD_1030 - CRISPR-associated Cas1 family protein 1029 68.57 +1 1180230..1182329 + 699 91975511 - RPD_1031 - CoA-binding 1030 62.96 0 1182373..1183398 + 341 91975512 - RPD_1032 - extracellular solute-binding protein 1031 63.04 0 1183478..1185130 + 550 91975513 - RPD_1033 - binding-protein-dependent transport systems inner membrane component 1032 66.39 0 1185127..1186206 + 359 91975514 - RPD_1034 - spermidine/putrescine ABC transporter ATP-binding subunit 1033 67.27 0 1186203..1187873 + 556 91975515 - RPD_1035 - FAD dependent oxidoreductase 1034 66.60 0 1187873..1189414 + 513 91975516 - RPD_1036 - FAD linked oxidase-like 1035 69.16 +1 1189411..1190853 + 480 91975517 - RPD_1037 - carbohydrate kinase, FGGY 1036 64.47 0 1191002..1191637 + 211 91975518 - RPD_1038 - regulatory protein, TetR 1037 65.76 0 1191683..1192561 - 292 91975519 - RPD_1039 - short-chain dehydrogenase/reductase SDR 1038 67.52 0 1192949..1193650 + 233 91975520 - RPD_1040 - hypothetical protein 1039 62.25 0 1193675..1194172 - 165 91975521 - RPD_1041 - regulatory protein, MarR 1040 68.52 +1 1194277..1195464 + 395 91975522 - RPD_1042 - putative nitrile hydratase regulator 1041 65.81 0 1195621..1197135 + 504 91975523 - RPD_1043 - amidase 1042 65.85 0 1197179..1198036 + 285 91975524 - RPD_1044 - inner-membrane translocator 1043 62.83 0 1198041..1199264 + 407 91975525 - RPD_1045 - twin-arginine translocation pathway signal 1044 64.49 0 1199326..1200384 + 352 91975526 - RPD_1046 - inner-membrane translocator 1045 66.26 0 1200371..1201105 + 244 91975527 - RPD_1047 - ABC transporter related 1046 68.80 +1 1201098..1201799 + 233 91975528 - RPD_1048 - ABC transporter related 1047 69.64 +1 1201968..1203212 + 414 91975529 - RPD_1049 - iron-containing alcohol dehydrogenase 1048 67.24 0 1203422..1204459 + 345 91975530 - RPD_1050 - fructose-1,6-bisphosphatase 1049 61.42 -1 1204488..1205363 + 291 91975531 - RPD_1051 - phosphoribulokinase 1050 67.56 0 1205398..1207413 + 671 91975532 - RPD_1052 - transketolase 1051 64.09 0 1207471..1208556 + 361 91975533 - RPD_1053 - fructose-1,6-bisphosphate aldolase 1052 64.29 0 1208614..1209999 + 461 91975534 - RPD_1054 - ribulose bisphosphate carboxylase 1053 57.91 -2 1210250..1210546 + 98 91975535 - RPD_1055 - hypothetical protein 1054 60.53 -1 1210576..1210803 - 75 91975536 - RPD_1056 - hypothetical protein 1055 63.83 0 1211163..1211444 + 93 91975537 - RPD_1057 - hypothetical protein 1056 64.65 0 1211455..1213335 + 626 91975538 - RPD_1058 - ferrous iron transport protein B 1057 65.38 0 1213345..1214199 - 284 91975539 - RPD_1059 - hypothetical protein 1058 63.47 0 1214455..1215393 + 312 91975540 - RPD_1060 - short-chain dehydrogenase/reductase SDR 1059 62.66 0 1215686..1217434 + 582 91975541 - RPD_1061 - transcriptional regulator NifA 1060 61.54 0 1217618..1217812 + 64 91975542 - RPD_1062 - 4Fe-4S ferredoxin, iron-sulfur binding 1061 64.04 0 1218030..1219589 + 519 91975543 - RPD_1063 - nitrogenase cofactor biosynthesis protein NifB 1062 63.06 0 1219613..1219834 + 73 91975544 - RPD_1064 - 4Fe-4S ferredoxin, iron-sulfur binding 1063 64.43 0 1219844..1220200 + 118 91975545 - RPD_1065 - HesB/YadR/YfhF 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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