version 1.0
Rhodopseudomonas palustris BisB5, complete genome - 1..4892717 4397 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 53 64.27 0 65655..66530 - 291 91974535 - RPD_0053 - inner-membrane translocator 54 63.96 0 66611..67423 - 270 91974536 - RPD_0054 - enoyl-CoA hydratase 55 60.88 -1 67486..67848 - 120 91974537 - RPD_0055 - hypothetical protein 56 62.42 0 68026..69015 + 329 91974538 - RPD_0056 - integral membrane protein TerC 57 64.03 0 69012..69314 + 100 91974539 - RPD_0057 - hypothetical protein 58 65.38 0 69369..69836 + 155 91974540 - RPD_0058 - tellurite resistance protein-like 59 60.52 -1 70113..70730 + 205 91974541 - RPD_0059 - hypothetical protein 60 62.20 0 70717..71097 + 126 91974542 - RPD_0060 - regulatory protein, ArsR 61 62.06 0 71131..71868 + 245 91974543 - RPD_0061 - undecaprenyl diphosphate synthase 62 60.48 -1 71985..73535 + 516 91974544 - RPD_0062 - magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 63 61.34 -1 73673..74686 + 337 91974545 - RPD_0063 - hypothetical protein 64 57.47 -2 75240..76196 - 318 91974546 - RPD_0064 - helix-turn-helix, AraC type 65 62.70 0 76970..79036 + 688 91974547 - RPD_0065 - chemotaxis sensory transducer 66 61.20 -1 79164..81395 + 743 91974548 - RPD_0066 - GGDEF domain-containing protein 67 66.67 0 82163..83650 - 495 91974549 - RPD_0067 - ATP-binding region, ATPase-like 68 64.47 0 83786..84514 + 242 91974550 - RPD_0068 - ribonuclease P protein component 69 63.24 0 84531..86396 + 621 91974551 - RPD_0069 - putative inner membrane protein translocase component YidC 70 66.21 0 86689..87342 + 217 91974552 - RPD_0070 - GTPase EngB 71 72.36 +2 87339..87707 + 122 91974553 - RPD_0071 - hypothetical protein 72 64.27 0 87857..88816 + 319 91974554 - RPD_0072 - acetylglutamate kinase 73 67.62 0 88816..89970 + 384 91974555 - RPD_0073 - peptidoglycan binding domain-containing protein 74 64.25 0 89967..90668 + 233 91974556 - RPD_0074 - pyrimidine 5-nucleotidase 75 68.32 0 90762..91607 + 281 91974557 dapD RPD_0075 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 76 55.21 -2 91810..92097 + 95 91974558 - RPD_0076 - hypothetical protein 77 66.24 0 92115..93281 + 388 91974559 - RPD_0077 - succinyl-diaminopimelate desuccinylase 78 64.80 0 93536..94498 - 320 91974560 - RPD_0078 - transposase, IS4 79 69.51 +1 94698..95435 - 245 91974561 truA RPD_0079 - tRNA pseudouridine synthase A 80 69.35 +1 95609..96541 - 310 91974562 fmt RPD_0080 - methionyl-tRNA formyltransferase 81 62.31 0 96621..97148 - 175 91974563 - RPD_0081 - peptide deformylase 82 66.50 0 97298..98515 + 405 91974564 - RPD_0082 - hypothetical protein 83 67.83 0 98724..100097 + 457 91974565 - RPD_0083 - major facilitator transporter 84 67.13 0 100126..100554 - 142 91974566 - RPD_0084 - hypothetical protein 85 67.66 0 100574..101179 - 201 91974567 recR RPD_0085 - recombination protein RecR 86 67.29 0 101293..101613 - 106 91974568 - RPD_0086 - hypothetical protein 87 67.79 0 101648..103522 - 624 91974569 - RPD_0087 - DNA polymerase III subunits gamma and tau 88 64.81 0 103996..104481 + 161 91974570 - RPD_0088 - histidine triad (HIT) protein 89 66.67 0 104486..105418 + 310 91974571 - RPD_0089 - NUDIX hydrolase 90 67.53 0 105415..106344 + 309 91974572 - RPD_0090 - PfkB 91 64.96 0 106399..107100 - 233 91974573 - RPD_0091 - hypothetical protein 92 71.10 +1 107176..107604 - 142 91974574 - RPD_0092 - hypothetical protein 93 65.10 0 107613..108380 - 255 91974575 - RPD_0093 - hydroxyacylglutathione hydrolase 94 70.07 +1 108557..109321 + 254 91974576 - RPD_0094 - methyltransferase type 11 95 66.25 0 109382..110107 - 241 91974577 - RPD_0095 - hypothetical protein 96 69.97 +1 110600..111478 - 292 91974578 - RPD_0096 - HemK family modification methylase 97 66.11 0 111521..112606 - 361 91974579 prfA RPD_0097 - peptide chain release factor 1 98 67.90 0 112658..114925 - 755 91974580 - RPD_0098 - PTSINtr with GAF domain, PtsP 99 66.19 0 115231..116484 - 417 91974581 - RPD_0099 - aspartate kinase 100 65.62 0 116843..117604 + 253 91974582 - RPD_0100 - 3-demethylubiquinone-9 3-methyltransferase 101 66.42 0 117713..118528 - 271 91974583 - RPD_0101 - hypothetical protein 102 68.33 0 118681..119580 + 299 91974584 - RPD_0102 - hypothetical protein 103 65.75 0 119581..120015 - 144 91974585 - RPD_0103 - hypothetical protein 104 65.67 0 120224..120727 - 167 91974586 - RPD_0104 - hypothetical protein 105 66.55 0 120724..121599 - 291 91974587 - RPD_0105 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 106 64.26 0 121596..121886 - 96 91974588 - RPD_0106 - glutaredoxin GrxC 107 69.47 +1 121938..122756 - 272 91974589 - RPD_0107 - phosphoribosyltransferase 108 66.01 0 122868..123170 + 100 91974590 - RPD_0108 - hypothetical protein 109 70.26 +1 123232..124065 + 277 91974591 - RPD_0109 - methyltransferase type 11 110 66.42 0 124127..124528 - 133 91974592 - RPD_0110 - NUDIX hydrolase 111 68.28 0 124701..125942 - 413 91974593 argJ RPD_0111 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 112 68.24 0 126213..126722 - 169 91974594 - RPD_0112 - OsmC-like protein 113 70.48 +1 126781..127566 - 261 91974595 - RPD_0113 - ABC transporter related 114 68.87 +1 127566..128426 - 286 91974596 - RPD_0114 - binding-protein-dependent transport systems inner membrane component 115 64.74 0 128620..129606 - 328 91974597 - RPD_0115 - ABC transporter, substrate-binding protein, aliphatic sulphonates 116 65.77 0 129849..132650 + 933 91974598 - RPD_0116 - PII uridylyl-transferase 117 68.25 0 132778..133347 + 189 91974599 - RPD_0117 - putative threonine efflux protein-like 118 65.62 0 133645..135261 - 538 91974600 - RPD_0118 - HWE histidine kinase 119 66.19 0 135398..138127 - 909 91974601 - RPD_0119 - sensor histidine kinase with PAS/PAC 120 63.17 0 138274..138702 - 142 91974602 - RPD_0120 - hypothetical protein 121 60.77 -1 138971..140191 + 406 91974603 - RPD_0121 - extracellular ligand-binding receptor 122 60.24 -1 140396..140815 + 139 91974604 - RPD_0122 - hypothetical protein 123 65.48 0 140960..141211 - 83 91974605 - RPD_0123 - hypothetical protein 124 67.64 0 141403..143565 + 720 91974606 - RPD_0124 - penicillin-binding protein 1A 125 66.80 0 143897..144667 - 256 91974607 - RPD_0125 - hypothetical protein 126 62.97 0 144990..146315 - 441 91974608 - RPD_0126 - polyhydroxyalkanoate depolymerase, intracellular 127 61.11 -1 146905..147660 + 251 91974609 - RPD_0127 - methyltransferase type 12 128 61.85 0 147710..148540 - 276 91974610 - RPD_0128 - hypothetical protein 129 68.18 0 148537..149331 - 264 91974611 - RPD_0129 - ABC transporter related 130 65.99 0 149441..150763 + 440 91974612 - RPD_0130 - periplasmic sensor signal transduction histidine kinase 131 67.57 0 150866..151420 + 184 91974613 - RPD_0131 - response regulator receiver 132 64.79 0 151611..152090 - 159 91974614 - RPD_0132 - hypothetical protein 133 66.13 0 152241..153359 + 372 91974615 - RPD_0133 - von Willebrand factor, type A 134 64.87 0 153579..154247 + 222 91974616 - RPD_0134 - beta-lactamase-like 135 63.94 0 154717..155706 + 329 91974617 - RPD_0135 - helix-turn-helix, AraC type 136 66.43 0 155814..156233 - 139 91974618 - RPD_0136 - hypothetical protein 137 66.07 0 156463..157641 - 392 91974619 - RPD_0137 - esterase, PHB depolymerase 138 58.94 -1 157856..158101 - 81 91974620 - RPD_0138 - hypothetical protein 139 68.18 0 158217..159605 - 462 91974621 - RPD_0139 - chromate transporter 140 69.28 +1 159602..160213 - 203 91974622 - RPD_0140 - hypothetical protein 141 65.12 0 160419..160742 - 107 91974623 - RPD_0141 - hypothetical protein 142 64.14 0 160993..161466 + 157 91974624 - RPD_0142 - hypothetical protein 143 68.78 +1 161499..161972 + 157 91974625 - RPD_0143 - hypothetical protein 144 69.95 +1 161969..162517 + 182 91974626 - RPD_0144 - hypothetical protein 145 70.97 +1 162595..163710 - 371 91974627 - RPD_0145 - hypothetical protein 146 68.27 0 163879..165252 + 457 91974628 - RPD_0146 - MmgE/PrpD 147 61.74 0 165321..165929 + 202 91974629 - RPD_0147 - hypothetical protein 148 67.09 0 166201..167619 + 472 91974630 - RPD_0148 - malonyl-CoA decarboxylase 149 66.99 0 167670..168587 + 305 91974631 - RPD_0149 - Pirin-like 150 67.65 0 168656..169573 + 305 91974632 - RPD_0150 - phosphoribosylaminoimidazole-succinocarboxamide synthase 151 69.86 +1 169820..170602 + 260 91974633 - RPD_0151 - enoyl-CoA hydratase 152 65.97 0 170705..171424 - 239 91974634 radC RPD_0152 - DNA repair protein RadC 64.98 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.