version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 879 66.78 0 979493..980344 - 283 39933959 - RPA0882 - ABC transporter, permease 880 67.42 0 980454..981248 - 264 39933960 - RPA0883 - ABC transporter, ATP-binding protein 881 65.77 0 981450..982448 - 332 39933961 - RPA0884 - ABC transporter, substrate-binding protein 882 68.50 +1 982576..982848 - 90 39933962 - RPA0885 - hypothetical protein 883 65.41 0 983016..984524 + 502 39933963 - RPA0886 - putative diguanylate cyclase (GGDEF) 884 64.73 0 984555..985430 - 291 39933964 exoN RPA0887 - UTP-glucose-1-phosphate uridylyltransferase 885 65.71 0 985554..986600 - 348 39933965 - RPA0888 - alpha/beta hydrolase fold 886 62.47 0 986719..987195 + 158 39933966 hspD RPA0889 - heat shock protein Hsp20 887 72.20 +2 987337..988113 - 258 39933967 - RPA0890 - hypothetical protein 888 65.04 0 988573..993300 + 1575 39933968 gltB RPA0891 - glutamate synthase ferredoxin subunit 889 66.60 0 993473..994927 + 484 39933969 gltD RPA0892 - glutamate synthase subunit beta 890 66.42 0 995274..995675 + 133 39933970 - RPA0893 - hypothetical protein 891 66.98 0 995769..996728 - 319 39933971 - RPA0894 - putative transposase 892 67.44 0 997027..997803 - 258 39933972 - RPA0895 - putative 3-oxoacyl-[ACP] reductase 893 65.71 0 997944..998678 + 244 39933973 - RPA0896 - putative 3-oxoacyl-acyl carrier protein reductase 894 69.73 +1 998750..1000444 - 564 39933974 - RPA0897 - hypothetical protein 895 68.41 +1 1000591..1001508 - 305 39933975 dapA RPA0898 - dihydrodipicolinate synthase 896 67.74 0 1002043..1003440 - 465 39933976 - RPA0899 - lytic murein transglycosylase 897 68.25 0 1003627..1004259 + 210 39933977 - RPA0900 - Rht family amino acid efflux protein 898 66.54 0 1004276..1005043 - 255 39933978 - RPA0901 - hypothetical protein 899 63.66 0 1005076..1005507 - 143 39933979 - RPA0902 - glyoxalase/bleomycin resistance protein/dioxygenase 900 69.83 +1 1005555..1006154 + 199 39933980 - RPA0903 - TetR family transcriptional regulator 901 63.74 0 1006170..1007090 - 306 39933981 - RPA0904 - histidinol-phosphate phosphatase, putative, inositol monophosphatase 902 59.20 -1 1007654..1007827 - 57 39933982 - RPA0905 - Flp/Fap pilin component 903 64.86 0 1007978..1008865 - 295 39933983 - RPA0906 - N-formylglutamate amidohydrolase 904 60.00 -1 1009176..1009535 + 119 39933984 - RPA0907 - response regulator receiver (CheY-like protein) 905 67.46 0 1009925..1010050 + 41 39933985 - RPA0908 - hypothetical protein 906 66.67 0 1010498..1011097 - 199 39933986 wrbA RPA0909 - TrpR binding protein WrbA 907 66.81 0 1011260..1011958 - 232 39933987 - RPA0910 - hypothetical protein 908 70.78 +1 1012091..1013014 + 307 39933988 - RPA0911 - LysR family transcriptional regulator 909 68.47 +1 1013029..1013862 - 277 39933989 - RPA0912 - hypothetical protein 910 63.46 0 1013997..1014650 + 217 39933990 - RPA0913 - hypothetical protein 911 66.35 0 1014871..1017750 - 959 39933991 - RPA0914 - diguanylate cyclase/phosphodiesterase 912 65.97 0 1017873..1018871 - 332 39933992 - RPA0915 - putative NADPH quinone oxidoreductase 913 59.38 -1 1018985..1019176 + 63 39933993 - RPA0916 - hypothetical protein 914 67.06 0 1019597..1020106 + 169 39933994 - RPA0917 - AraC family transcriptional regulator 915 61.40 -1 1020328..1020555 - 75 39933995 rpmE RPA0918 - 50S ribosomal protein L31 916 68.45 +1 1020753..1022657 + 634 39933996 - RPA0919 - ABC transporter permease/ATP-binding protein 917 67.11 0 1022801..1023247 - 148 39933997 - RPA0920 - GCN5-related N-acetyltransferase 918 66.76 0 1023394..1024419 - 341 39933998 - RPA0921 - hypothetical protein 919 66.76 0 1024419..1025438 - 339 39933999 - RPA0922 - hypothetical protein 920 65.94 0 1025618..1026445 + 275 39934000 - RPA0923 - hypothetical protein 921 65.40 0 1026442..1027467 + 341 39934001 - RPA0924 - cyclopropane-fatty-acyl-phospholipid synthase 922 63.59 0 1027750..1027944 + 64 39934002 - RPA0925 - hypothetical protein 923 64.10 0 1028028..1028222 + 64 39934003 - RPA0926 - hypothetical protein 924 60.00 -1 1028320..1028529 - 69 39934004 - RPA0927 - XRE family transcriptional regulator 925 67.53 0 1028533..1029108 - 191 39934005 - RPA0928 - hypothetical protein 926 65.14 0 1029178..1029765 + 195 39934006 - RPA0929 - hypothetical protein 927 67.50 0 1029992..1030594 - 200 39934007 - RPA0930 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 928 66.54 0 1030591..1032129 - 512 39934008 ubiD RPA0931 - carboxylyase-like protein 929 66.67 0 1032245..1032790 + 181 39934009 - RPA0932 - hypothetical protein 930 66.36 0 1032794..1033771 + 325 39934010 - RPA0933 - peptidase U32 931 65.91 0 1033840..1034760 + 306 39934011 - RPA0934 - peptidase U32 932 62.21 0 1035248..1036549 - 433 39934012 - RPA0935 - hypothetical protein 933 65.27 0 1036631..1037203 + 190 39934013 - RPA0936 - TetR family transcriptional regulator 934 67.43 0 1037232..1038020 - 262 39934014 - RPA0937 - extragenic suppressor protein SuhB 935 68.77 +1 1038125..1039216 - 363 39934015 - RPA0938 - hypothetical protein 936 70.91 +1 1039233..1039892 - 219 39934016 - RPA0939 - thiamine monophosphate synthase 937 65.31 0 1039898..1040932 - 344 39934017 - RPA0940 - fructose-bisphosphate aldolase 938 58.02 -2 1040987..1041310 - 107 39934018 - RPA0941 - hypothetical protein 939 62.11 0 1041307..1041591 - 94 39934019 - RPA0942 - hypothetical protein 940 67.50 0 1041690..1042886 - 398 39934020 pgk RPA0943 - phosphoglycerate kinase 941 63.59 0 1043108..1044115 - 335 39934021 cbbG RPA0944 - glyceraldehyde-3-phosphate dehydrogenase, type I 942 67.47 0 1044331..1046316 - 661 39934022 cbbT2 RPA0945 - transketolase 943 69.31 +1 1046611..1046988 + 125 39934023 - RPA0946 - hypothetical protein 944 68.86 +1 1046985..1047395 + 136 39934024 - RPA0947 - hypothetical protein 945 67.96 0 1047902..1049140 - 412 39934025 - RPA0948 - putative RNA methyltransferase 946 69.05 +1 1049187..1050611 - 474 39934026 matE2 RPA0949 - MATE efflux family protein 947 67.61 0 1050674..1051414 - 246 39934027 tly RPA0950 - hemolysin A 948 66.31 0 1051417..1051980 - 187 39934028 - RPA0951 - nucleoside 2-deoxyribosyltransferase 949 65.99 0 1052203..1054128 - 641 39934029 dxs RPA0952 - 1-deoxy-D-xylulose-5-phosphate synthase 950 63.10 0 1054542..1054793 - 83 39934030 xseB RPA0953 - exodeoxyribonuclease VII small subunit 951 65.48 0 1054877..1055806 - 309 39934031 - RPA0954 - histone deacetylase superfamily 952 65.45 0 1055912..1057630 - 572 39934032 - RPA0955 - putative 5`-nucleotidase family protein 953 64.36 0 1057814..1058290 + 158 39934033 - RPA0956 - hypothetical protein 954 63.14 0 1058329..1059123 - 264 39934034 - RPA0957 - enoyl-CoA hydratase/isomerase 955 67.56 0 1059297..1061078 - 593 39934035 - RPA0958 - putative acyl-CoA dehydrogenase 956 68.96 +1 1061498..1062499 + 333 39934036 hupU RPA0959 - uptake hydrogenase accessory protein hupU 957 63.79 0 1064173..1065285 + 370 39934037 hupS RPA0962 - hydrogenase small chain 958 63.82 0 1065304..1067097 + 597 39934038 hupL RPA0963 - hydrogenase large chain 959 59.67 -1 1067114..1067842 + 242 39934039 hupC RPA0964 - Ni/Fe-hydrogenase 1 B-type cytochrome subunit 960 65.44 0 1067904..1068557 + 217 39934040 hupD RPA0965 - hydrogenase maturation protein hupD 961 72.22 +2 1068571..1069164 + 197 39934041 hupE RPA0966 - putative membrane-bound hydrogenase component hupE 962 67.33 0 1069185..1069487 + 100 39934042 hupF RPA0967 - hydrogenase expression/formation protein hupF 963 68.16 0 1069708..1070109 + 133 39934043 hupG RPA0968 - putative hydrogenase expression/formation protein hupG 964 67.01 0 1070106..1070972 + 288 39934044 hupH RPA0969 - hydrogenase expression/formation protein hupH 965 69.01 +1 1070969..1071181 + 70 39934045 hupI RPA0970 - putative rubredoxin hupI 966 70.10 +1 1071171..1071695 + 174 39934046 hupJ RPA0971 - putative hydrogenase expression/formation protein hupJ 967 69.55 +1 1071692..1072801 + 369 39934047 hupK RPA0972 - putative hydrogenase expression/formation protein hupK 968 65.20 0 1072794..1073135 + 113 39934048 hypA RPA0973 - hydrogenase formation/expression protein hypA 969 63.74 0 1073135..1074091 + 318 39934049 hypB RPA0974 - hydrogenase expression/formation protein hypB 970 69.96 +1 1074096..1076369 + 757 39934050 hypF RPA0975 - hydrogenase maturation protein hypF 971 67.95 0 1076369..1076602 + 77 39934051 hypC RPA0976 - putative hypC 972 66.93 0 1076599..1077741 + 380 39934052 hypD RPA0977 - hydrogenase expression/formation protein hypD 973 69.15 +1 1077738..1078784 + 348 39934053 hypE RPA0978 - hydrogenase expression/formation protein hypE 974 64.87 0 1078825..1080273 + 482 39934054 hoxA RPA0979 - two component sigma-54-dependent hydrogenase transcriptional regulator hoxA 975 65.48 0 1080263..1081615 + 450 39934055 - RPA0980 - sensor histidine kinase 976 65.79 0 1081721..1084108 + 795 39934056 - RPA0981 - sensor histidine kinase 977 66.16 0 1084132..1084923 - 263 39934057 pcaR RPA0982 - transcriptional regulator PcaR 978 65.78 0 1085284..1086642 + 452 39934058 - RPA0983 - phthalate dioxygenase 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.