version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 664 63.07 0 735418..736278 - 286 39933744 hbaF RPA0667 - inner-membrane translocator 665 64.80 0 736364..737542 - 392 39933745 hbaE RPA0668 - putative ABC transporter subunit, substrate-binding component 666 64.32 0 737719..739338 - 539 39933746 hbaA RPA0669 - 4-hydroxybenzoate-CoA ligase 667 65.45 0 739505..739996 + 163 39933747 hbaB RPA0670 - 4-hydroxybenzoyl-CoA reductase, first of three subunits 668 65.42 0 739993..742326 + 777 39933748 hbaC RPA0671 - 4-hydroxybenzoyl-CoA reductase,second of three subunits 669 68.39 0 742323..743306 + 327 39933749 hbaD RPA0672 - 4-hydroxybenzoyl-CoA reductase, third of three subunits 670 65.15 0 743331..744056 - 241 39933750 hbaR RPA0673 - hydroxybenzoate anaerobic degradation regulatory protein HbaR 671 66.94 0 744248..745360 + 370 39933751 - RPA0674 - alcohol dehydrogenase 672 65.94 0 745396..746217 + 273 39933752 - RPA0675 - alpha/beta fold family hydrolase 673 64.78 0 746346..748040 + 564 39933753 - RPA0676 - enoyl-CoA hydratase 674 63.29 0 748211..749662 + 483 39933754 - RPA0677 - hypothetical protein 675 64.19 0 749989..752973 + 994 161610778 gltA RPA0678 - trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein 676 64.80 0 752997..755030 - 677 39933756 - RPA0679 - hypothetical protein 677 65.86 0 755097..755714 - 205 39933757 - RPA0680 - TetR family transcriptional regulator 678 64.73 0 755856..756890 + 344 39933758 - RPA0681 - membrane permeases, cation efflux pump 679 63.54 0 756887..759601 + 904 39933759 - RPA0682 - ABC transporter ATP-binding protein 680 60.32 -1 759598..760731 + 377 39933760 - RPA0683 - ABC transporter permease 681 59.44 -1 760739..760918 - 59 39933761 - RPA0684 - hypothetical protein 682 67.24 0 761061..761936 + 291 39933762 - RPA0685 - IclR family transcriptional regulator 683 66.56 0 762097..763071 + 324 39933763 - RPA0686 - hypothetical protein 684 66.36 0 763121..763768 - 215 39933764 - RPA0687 - hypothetical protein 685 69.74 +1 763749..764333 - 194 39933765 phnN RPA0688 - phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN 686 67.99 0 764330..765466 - 378 39933766 phnM1 RPA0689 - phosphonate utilization (C-P lyase) component 687 68.23 0 765505..766209 - 234 39933767 phnL RPA0690 - phosphonate ABC transporter ATP-binding protein 688 67.28 0 766215..767033 - 272 39933768 phnK RPA0691 - phosphonates transport ATP-binding protein 689 64.28 0 767026..767904 - 292 39933769 phnJ RPA0692 - phosphonate metabolism PhnJ 690 66.67 0 767901..768998 - 365 39933770 phnI RPA0693 - phosphonate metabolism 691 67.00 0 769002..769604 - 200 39933771 phnH RPA0694 - carbon-phosphorus lyase complex subunit 692 69.20 +1 769607..770080 - 157 39933772 phnG RPA0695 - phosphonate metabolism PhnG 693 70.10 +1 770192..770920 + 242 39933773 - RPA0696 - GntR family transcriptional regulator 694 64.13 0 771245..772111 - 288 39933774 phnE1 RPA0697 - phosphonate ABC transporter permease 695 63.83 0 772108..772989 - 293 39933775 phnE2 RPA0698 - phosphonate ABC transporter permease 696 62.05 -1 773058..773966 - 302 39933776 phnD RPA0699 - phosphonate ABC transporter periplasmic phosphonate-binding protein 697 67.16 0 774076..774888 - 270 39933777 phnC RPA0700 - phosphonate ABC transporter ATP-binding 698 64.44 0 775029..775748 + 239 39933778 - RPA0701 - putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) 699 68.17 0 775745..776938 + 397 39933779 phnM2 RPA0702 - phosphonate ABC transporter permease 700 65.82 0 776961..777665 + 234 39933780 - RPA0703 - hypothetical protein 701 67.58 0 777662..778642 - 326 39933781 - RPA0704 - hypothetical protein 702 65.64 0 778886..779080 + 64 39933782 - RPA0705 - hypothetical protein 703 69.60 +1 779578..780054 + 158 39933783 - RPA0706 - endonuclease III 704 64.51 0 780032..780355 - 107 39933784 cutA RPA0707 - putative periplasmic divalent cation resistance protein CutA 705 67.82 0 780767..781288 + 173 39933785 - RPA0708 - hypothetical protein 706 66.67 0 781403..781948 + 181 39933786 - RPA0709 - hypothetical protein 707 65.52 0 781991..782251 + 86 39933787 - RPA0710 - hypothetical protein 708 65.62 0 782498..783169 - 223 39933788 - RPA0711 - nitroreductase family protein 709 69.32 +1 783196..784251 - 351 39933789 cobT RPA0712 - putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 710 68.58 +1 784566..785087 + 173 39933790 - RPA0713 - hypothetical protein 711 69.11 +1 785084..785614 + 176 39933791 cobU RPA0714 - bifunctional cobinamide kinase, cobinamide phosphate guanylyltransferase protein 712 67.36 0 785618..786622 + 334 39933792 cobW RPA0715 - putative cobalamin synthesis protein cobW 713 68.56 +1 786757..790506 + 1249 39933793 cobN RPA0716 - cobaltochelatase 714 63.00 0 790503..791129 + 208 39933794 cobO RPA0717 - cob(I)yrinic acid a,c-diamide adenosyltransferase 715 68.15 0 791277..792761 + 494 39933795 cobQ1 RPA0718 - cobyric acid synthase 716 67.49 0 792734..793705 - 323 39933796 cobD RPA0719 - cobalamin biosynthesis protein CobD 717 66.54 0 793707..794519 - 270 39933797 - RPA0720 - putative ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components 718 69.49 +1 794583..795572 + 329 39933798 cobC RPA0721 - putative cobalamin biosynthetic protein CobC 719 70.13 +1 795584..796363 - 259 39933799 fecE RPA0722 - putative iron(III) dicitrate ABC transporter, ATP-binding component FecE 720 69.98 +1 796360..797385 - 341 39933800 - RPA0723 - hemin ABC transporter, permease component 721 65.25 0 797393..798451 - 352 39933801 nxiA RPA0724 - putative high-affinity nickel-transport protein 722 67.28 0 798784..799107 - 107 39933802 sugE RPA0725 - chaperone 723 66.53 0 799104..799841 - 245 39933803 btaB RPA0726 - putative BtaB protein, S-adenosylmethionine:diacylgycerolhomoserine-N-methyltransf erase 724 66.75 0 799994..801217 + 407 39933804 - RPA0727 - S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase 725 58.78 -2 801773..803179 + 468 39933805 - RPA0728 - hypothetical protein 726 59.76 -1 803190..803768 + 192 39933806 - RPA0729 - hypothetical protein 727 58.41 -2 803781..804470 + 229 39933807 - RPA0730 - hypothetical protein 728 67.11 0 805004..805897 + 297 39933808 - RPA0731 - LysR family transcriptional regulator 729 69.85 +1 806161..806631 + 156 39933809 fdsG RPA0732 - formate dehydrogenase subunit gamma 730 68.14 0 806628..808184 + 518 39933810 fdsB RPA0733 - NADH dehydrogenase (quinone) 731 66.25 0 808197..811043 + 948 39933811 fdsA RPA0734 - formate dehydrogenase, alpha subunit 732 67.87 0 811043..811873 + 276 39933812 fdsC RPA0735 - formate dehydrogenase accessory protein 733 65.74 0 811863..812078 + 71 39933813 fdsD RPA0736 - NAD-dependent formate dehydrogenase delta subunit 734 64.55 0 812088..813791 + 567 39933814 - RPA0737 - MFS superfamily oxalate/formate antiporter 735 61.28 -1 813898..815307 + 469 39933815 - RPA0738 - L-sorbosone dehydrogenase 736 62.61 0 815452..816042 + 196 39933816 cyc RPA0739 - putative cytochrome c 737 68.38 0 816117..817226 + 369 39933817 - RPA0740 - Acyl-CoA dehydrogenase 738 64.03 0 817223..818170 + 315 39933818 - RPA0741 - hypothetical protein 739 67.31 0 818170..819561 + 463 39933819 - RPA0742 - hypothetical protein 740 66.01 0 819739..821265 + 508 39933820 - RPA0743 - putative acid-CoA ligase 741 67.72 0 821440..821724 - 94 39933821 - RPA0744 - putative high potential iron sulfur protein (HiPIP) 742 61.98 -1 821865..824297 - 810 39933822 - RPA0745 - outer membrane protein precursor 743 67.73 0 824397..826001 - 534 39933823 - RPA0746 - deca-heme c-type cytochrome 744 65.62 0 826776..827822 - 348 39933824 cysA RPA0747 - sulphate transport system permease protein 1 745 64.04 0 827812..828726 - 304 39933825 cysW RPA0748 - sulfate ABC transporter, permease component 746 64.76 0 828731..829567 - 278 39933826 cysT RPA0749 - putative sulfate ABC transporter, permease component 747 62.63 0 829860..830849 - 329 39933827 sbp RPA0750 - thiosulphate-binding protein 748 64.10 0 830974..831714 - 246 39933828 cysH RPA0751 - phosphoadenosine phosphosulfate reductase 749 65.06 0 832014..832883 + 289 39933829 cysD RPA0752 - sulfate adenylyltransferase subunit 2 750 68.66 +1 832905..834815 + 636 39933830 cysN RPA0753 - putative CysN/CysC bifunctional enzyme, ATP-sulfurylase large subunit and adenylyl sulfate kinase 751 63.95 0 834822..836258 - 478 39933831 - RPA0754 - signal transduction histidine kinase 752 68.51 +1 836321..837298 - 325 39933832 - RPA0755 - putative oligopeptide ABC transporter, ATP-binding component 753 68.93 +1 837299..838711 - 470 39933833 - RPA0756 - putative amidase 754 62.56 0 838708..838902 - 64 39933834 - RPA0757 - hypothetical protein 755 66.57 0 838916..839974 - 352 39933835 - RPA0758 - putative oligopeptide ABC transporter, ATP-binding component 756 66.34 0 839979..840884 - 301 39933836 - RPA0759 - putative oligopeptide ABC transporter, permease component 757 67.61 0 840889..841842 - 317 39933837 - RPA0760 - putative oligopeptide ABC transporter, permease component 758 63.90 0 842040..843701 - 553 39933838 - RPA0761 - oligopeptide ABC transporter, periplasmic binding protein component 759 62.35 0 843889..845487 + 532 39933839 - RPA0762 - oligopeptide ABC transporter, periplasmic binding protein component 760 68.93 +1 845640..846434 + 264 39933840 - RPA0763 - methyltransferase 761 64.14 0 846490..846924 - 144 39933841 - RPA0764 - hypothetical protein 762 67.26 0 846945..849308 - 787 39933842 - RPA0765 - putative outer membrane receptor for iron transport 763 66.24 0 849702..850409 + 235 39933843 - RPA0766 - Crp/FNR family transcriptional regulator 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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