version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4184 66.67 0 4747662..4749023 + 453 39937265 - RPA4205 - PST family polysaccharide export protein 4185 64.89 0 4749468..4750256 - 262 39937266 - RPA4206 - 3-hydroxybutyrate dehydrogenase 4186 63.68 0 4750305..4751444 - 379 39937267 - RPA4207 - patatin-like phospholipase domain-containing protein 4187 64.73 0 4751539..4752054 - 171 39937268 - RPA4208 - allergen V5/Tpx-1-like protein 4188 62.14 0 4752301..4753338 - 345 39937269 glnA RPA4209 - glutamine synthetase II 4189 62.30 0 4753765..4754016 + 83 39937270 - RPA4210 - hypothetical protein 4190 65.81 0 4754118..4755053 - 311 39937271 glsA RPA4211 - glutaminase 4191 66.67 0 4755200..4755709 - 169 39937272 - RPA4212 - hypothetical protein 4192 62.86 0 4755696..4757351 - 551 39937273 - RPA4213 - sulfite reductase hemoprotein subunit 4193 67.94 0 4757362..4757676 - 104 39937274 - RPA4214 - hypothetical protein 4194 69.59 +1 4757673..4759109 - 478 39937275 cysG RPA4215 - uroporphyrin-III C-methyltransferase 4195 65.43 0 4759508..4761682 + 724 39937276 glcB RPA4216 - malate synthase G 4196 57.21 -2 4761873..4762073 + 66 39937277 - RPA4217 - hypothetical protein 4197 48.77 -2 4762211..4762372 - 53 39937278 - RPA4218 - hypothetical protein 4198 65.91 0 4762529..4763191 - 220 39937279 - RPA4219 - hypothetical protein 4199 67.19 0 4763214..4763981 - 255 39937280 - RPA4220 - ErfK/YbiS/YcfS/YnhG 4200 64.70 0 4764203..4765318 + 371 39937281 - RPA4221 - hypothetical protein 4201 65.91 0 4765452..4765847 - 131 39937282 - RPA4222 - hypothetical protein 4202 62.70 0 4766223..4767029 - 268 39937283 - RPA4223 - two-component response regulator 4203 54.39 -2 4767160..4767444 + 94 39937284 - RPA4224 - hypothetical protein 4204 63.55 0 4767444..4767989 + 181 39937285 - RPA4225 - RNA polymerase sigma factor 4205 64.18 0 4768147..4769913 - 588 39937286 - RPA4226 - signal transduction histidine kinase 4206 62.70 0 4770066..4770695 - 209 39937287 ureG RPA4227 - urease accessory protein UreG 4207 60.58 -1 4770919..4771263 + 114 39937288 - RPA4228 - hypothetical protein 4208 59.54 -1 4771282..4771632 + 116 39937289 - RPA4229 - hypothetical protein 4209 61.75 -1 4772098..4772382 + 94 39937290 - RPA4230 - hypothetical protein 4210 64.77 0 4772451..4774562 - 703 39937291 - RPA4231 - putative oxidoreductase 4211 65.75 0 4774697..4775023 + 108 39937292 - RPA4232 - hypothetical protein 4212 63.12 0 4775037..4776275 - 412 39937293 - RPA4233 - cyclic nucleotide regulated K+ channel 4213 61.67 -1 4776328..4777047 - 239 39937294 aadR RPA4234 - anaerobic aromatic degradation regulator 4214 62.50 0 4777176..4777559 + 127 39937295 - RPA4235 - putative cytochrome c, class I 4215 65.66 0 4777519..4778715 - 398 39937296 - RPA4236 - hypothetical protein 4216 65.00 0 4778728..4779507 - 259 39937297 - RPA4237 - ABC transporter ATP-binding protein 4217 62.80 0 4779510..4780646 - 378 39937298 - RPA4238 - hypothetical protein 4218 61.26 -1 4780758..4781219 + 153 39937299 - RPA4239 - hypothetical protein 4219 65.64 0 4781248..4783971 - 907 39937300 - RPA4240 - GCN5-related N-acetyltransferase 4220 56.23 -2 4784111..4784503 - 130 39937301 - RPA4241 - CBS domain-containing protein 4221 67.76 0 4784794..4786353 + 519 39937302 - RPA4242 - hypothetical protein 4222 64.52 0 4786335..4788101 - 588 39937303 phaC RPA4243 - putative poly-beta-hydroxyalkanoate synthase 4223 67.38 0 4788368..4789204 - 278 39937304 - RPA4244 - hypothetical protein 4224 64.75 0 4789394..4790227 + 277 39937305 - RPA4245 - hypothetical protein 4225 62.98 0 4790314..4791045 + 243 39937306 - RPA4246 - CBS/transport-associated domain-containing protein 4226 64.57 0 4791190..4792716 + 508 39937307 fixL RPA4247 - two component low oxygen sensor histidine kinase 4227 62.91 0 4792709..4793320 + 203 39937308 fixJ RPA4248 - response regulator FixJ 4228 64.12 0 4793406..4793798 + 130 39937309 - RPA4249 - response regulator receiver (CheY-like protein) 4229 66.67 0 4793997..4794689 + 230 39937310 fixK RPA4250 - transcriptional regulator FixK 4230 66.59 0 4795019..4796326 + 435 39937311 oahs RPA4251 - O-acetylhomoserine/O-acetylserine sulfhydrylase 4231 69.45 +1 4796479..4797843 - 454 39937312 nuoN2 RPA4252 - NADH dehydrogenase (quinone) 4232 66.39 0 4797854..4799296 - 480 39937313 nuoM2 RPA4253 - proton-translocating NADH-quinone oxidoreductase, chain M 4233 68.70 +1 4799287..4801356 - 689 39937314 nuoL2 RPA4254 - proton-translocating NADH-quinone oxidoreductase, chain L 4234 69.90 +1 4801359..4801667 - 102 39937315 nuoK2 RPA4255 - NADH-ubiquinone oxidoreductase, chain 4L 4235 66.27 0 4801664..4802170 - 168 39937316 nuoJ2 RPA4256 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 4236 65.33 0 4802167..4802688 - 173 39937317 nuoI2 RPA4257 - NADH dehydrogenase subunit I 4237 67.60 0 4802685..4803644 - 319 39937318 nuoH2 RPA4258 - respiratory-chain NADH dehydrogenase, subunit 1 4238 69.40 +1 4803641..4806274 - 877 39937319 nuoG2 RPA4259 - NADH dehydrogenase subunit G 4239 68.22 0 4806271..4807557 - 428 39937320 nuoF2 RPA4260 - NADH dehydrogenase (quinone) 4240 67.69 0 4807554..4808042 - 162 39937321 nuoE2 RPA4261 - NADH dehydrogenase subunit E 4241 64.95 0 4808039..4809784 - 581 39937322 nuoCD RPA4262 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 4242 66.03 0 4809781..4810407 - 208 39937323 nuoB2 RPA4263 - NADH-quinone oxidoreductase, B subunit 4243 68.46 +1 4810404..4810793 - 129 39937324 nuoA2 RPA4264 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 4244 65.44 0 4811238..4813037 + 599 39937325 ndvA RPA4265 - cyclic beta-1,2-glucan ABC transporter 4245 66.32 0 4813207..4814661 + 484 39937326 - RPA4266 - Serine-type D-Ala-D-Ala carboxypeptidase 4246 63.83 0 4814933..4816624 + 563 39937327 - RPA4267 - acyl-CoA synthetase 4247 61.93 -1 4816864..4817349 + 161 39937328 - RPA4268 - peroxiredoxin-like protein 4248 63.03 0 4817500..4817967 - 155 39937329 - RPA4269 - ribonuclease H 4249 66.97 0 4817964..4818947 - 327 39937330 thrB RPA4270 - homoserine kinase 4250 67.50 0 4819047..4820009 - 320 39937331 lytB2 RPA4271 - hydroxymethylbutenyl pyrophosphate reductase 4251 66.39 0 4820269..4820985 + 238 39937332 - RPA4272 - hypothetical protein 4252 71.69 +2 4821237..4821614 - 125 39937333 - RPA4273 - hypothetical protein 4253 51.10 -2 4822209..4823204 - 331 39937334 - RPA4274 - hypothetical protein 4254 59.05 -1 4823656..4824075 + 139 39937335 - RPA4275 - hypothetical protein 4255 58.33 -2 4824214..4824513 + 99 39937336 - RPA4276 - hypothetical protein 4256 66.19 0 4826624..4827253 + 209 39937337 - RPA4277 - hypothetical protein 4257 50.97 -2 4827318..4827884 + 188 39937338 - RPA4278 - hypothetical protein 4258 69.27 +1 4828105..4828641 + 178 39937339 - RPA4279 - hypothetical protein 4259 63.36 0 4828657..4829655 - 332 39937340 - RPA4280 - AraC family transcriptional regulator 4260 66.33 0 4830173..4831345 + 390 39937341 - RPA4281 - hypothetical protein 4261 62.87 0 4831532..4832005 + 157 39937342 - RPA4282 - photopigment and puc activator 4262 70.20 +1 4832018..4832923 - 301 39937343 - RPA4283 - LysR family transcriptional regulator 4263 65.73 0 4833016..4833657 + 213 39937344 - RPA4284 - YceI like family protein 4264 67.17 0 4833734..4834324 + 196 39937345 - RPA4285 - hypothetical protein 4265 69.90 +1 4834367..4835170 + 267 39937346 - RPA4286 - catalytic LigB subunit of aromatic ring-opening dioxygenase 4266 65.72 0 4835541..4836173 - 210 39937347 - RPA4287 - hypothetical protein 4267 71.45 +1 4836310..4837083 + 257 39937348 - RPA4288 - hypothetical protein 4268 72.40 +2 4837083..4837640 + 185 39937349 - RPA4289 - putative dual use protein Tyr:Ser/Thr phosphatase 4269 62.00 -1 4837773..4838222 + 149 39937350 - RPA4290 - hypothetical protein 4270 58.33 -2 4838558..4838713 + 51 39937351 pucBb RPA4291 - light harvesting protein B-800-850, beta chain B (antenna pigment protein, beta chain B) 4271 65.67 0 4838726..4838926 + 66 39937352 pucAb RPA4292 - light harvesting protein B-800-850, alpha chain B (antenna pigment protein, alpha chain B) (LH II-B alpha) 4272 65.30 0 4839395..4839613 + 72 39937353 - RPA4293 - hypothetical protein 4273 70.72 +1 4840036..4841637 - 533 39937354 - RPA4294 - hypothetical protein 4274 66.59 0 4841675..4842967 - 430 39937355 purA RPA4295 - adenylosuccinate synthetase 4275 61.42 -1 4843263..4843796 - 177 39937356 - RPA4296 - hypothetical protein 4276 64.85 0 4843966..4844790 + 274 39937357 - RPA4297 - putative aldose reductase 4277 68.79 +1 4845043..4845702 + 219 39937358 - RPA4298 - ATP/GTP-binding motif-containing protein 4278 66.02 0 4845862..4846791 + 309 39937359 - RPA4299 - DMT family permease 4279 67.15 0 4847325..4848356 + 343 39937360 - RPA4300 - DMT family permease 4280 67.18 0 4848372..4848566 - 64 39937361 - RPA4301 - hypothetical protein 4281 65.44 0 4848828..4851020 - 730 39937362 - RPA4302 - methyl-accepting chemotaxis receptor/sensory transducer 4282 67.49 0 4851150..4852121 - 323 39937363 - RPA4303 - rubrerythrin 4283 62.68 0 4852302..4853657 + 451 39937364 - RPA4304 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0