version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4144 66.09 0 4709325..4710020 + 231 39937225 - RPA4165 - hypothetical protein 4145 68.66 +1 4710032..4710985 + 317 39937226 - RPA4166 - putative nitrilase 4146 65.50 0 4711028..4713766 - 912 39937227 - RPA4167 - diguanylate cyclase/phosphodiesterase 4147 67.57 0 4713876..4714976 + 366 39937228 - RPA4168 - FAD dependent oxidoreductase 4148 65.30 0 4715067..4715798 + 243 39937229 - RPA4169 - GntR family regulatory protein 4149 61.01 -1 4716074..4717276 + 400 39937230 - RPA4170 - branched chain amino-acid ABC transporter substrate-binding protein 4150 53.65 -2 4717693..4718007 - 104 39937231 - RPA4171 - hypothetical protein 4151 63.06 0 4718090..4718449 - 119 39937232 - RPA4172 - hypothetical protein 4152 68.39 0 4718430..4719182 - 250 39937233 - RPA4173 - putative diguanylate cyclase (GGDEF) 4153 69.53 +1 4719311..4719799 + 162 39937234 purE RPA4174 - phosphoribosylaminoimidazole carboxylase catalytic subunit 4154 66.76 0 4719796..4720896 + 366 39937235 purK RPA4175 - phosphoribosylaminoimidazole carboxylase, ATPase subunit 4155 64.39 0 4721053..4721316 + 87 39937236 rpsU RPA4176 - 30S ribosomal protein S21 4156 71.58 +2 4721493..4722368 - 291 39937237 - RPA4177 - hypothetical protein 4157 62.15 0 4722518..4722805 - 95 39937238 - RPA4178 - hypothetical protein 4158 61.60 -1 4723009..4723383 + 124 39937239 - RPA4179 - hypothetical protein 4159 65.24 0 4723562..4724965 - 467 39937240 pntB RPA4180 - NAD(P) transhydrogenase, beta subunit 4160 60.19 -1 4724979..4725302 - 107 39937241 pntA RPA4181 - nicotinamide nucleotide transhydrogenase, subunit alpha2 4161 66.76 0 4725328..4726455 - 375 39937242 pntA RPA4182 - NAD(P)(+) transhydrogenase (AB-specific) 4162 55.56 -2 4726655..4726807 - 50 39937243 - RPA4183 - hypothetical protein 4163 64.03 0 4727027..4727329 + 100 39937244 - RPA4184 - hypothetical protein 4164 64.53 0 4727285..4729201 - 638 39937245 - RPA4185 - peptidase M3B, oligoendopeptidase-like clade 3 4165 64.86 0 4729537..4730202 + 221 39937246 - RPA4186 - TerC family integral membrane protein 4166 65.86 0 4730298..4731785 + 495 39937247 - RPA4187 - two component sigma-54-dependent Fis family transcriptional regulator 4167 67.86 0 4732135..4734309 + 724 39937248 - RPA4188 - hypothetical protein 4168 69.74 +1 4734594..4736255 + 553 39937249 - RPA4189 - hypothetical protein 4169 64.36 0 4736383..4736772 - 129 39937250 - RPA4190 - hypothetical protein 4170 63.67 0 4736843..4737142 - 99 39937251 - RPA4191 - hypothetical protein 4171 66.50 0 4737334..4737918 + 194 39937252 - RPA4192 - hypothetical protein 4172 66.95 0 4737915..4739348 + 477 39937253 pyk RPA4193 - pyruvate kinase 4173 63.40 0 4739575..4740003 - 142 39937254 osmC RPA4194 - OsmC-like protein 4174 67.16 0 4740000..4741004 - 334 39937255 - RPA4195 - alpha/beta hydrolase fold 4175 64.86 0 4741075..4741737 - 220 39937256 - RPA4196 - TPR repeat-containing protein 4176 62.70 0 4741835..4741960 - 41 39937257 rpmJ RPA4197 - 50S ribosomal protein L36 4177 62.53 0 4742272..4743141 + 289 39937258 - RPA4198 - amidohydrolase 2 4178 65.99 0 4743290..4744027 + 245 39937259 - RPA4199 - putative 2-haloacid halidohydrolase IVA 4179 66.46 0 4744104..4744586 + 160 39937260 - RPA4200 - YbaK/prolyl-tRNA synthetase associated domain-containing protein 4180 67.70 0 4744660..4744950 - 96 39937261 - RPA4201 - hypothetical protein 4181 67.04 0 4745124..4746449 - 441 39937262 - RPA4202 - methyl-accepting chemotaxis sensory transducer 4182 58.24 -2 4746424..4746945 - 173 39937263 - RPA4203 - methyl-accepting chemotaxis sensory transducer 4183 60.15 -1 4747181..4747441 - 86 39937264 - RPA4204 - hypothetical protein 4184 66.67 0 4747662..4749023 + 453 39937265 - RPA4205 - PST family polysaccharide export protein 4185 64.89 0 4749468..4750256 - 262 39937266 - RPA4206 - 3-hydroxybutyrate dehydrogenase 4186 63.68 0 4750305..4751444 - 379 39937267 - RPA4207 - patatin-like phospholipase domain-containing protein 4187 64.73 0 4751539..4752054 - 171 39937268 - RPA4208 - allergen V5/Tpx-1-like protein 4188 62.14 0 4752301..4753338 - 345 39937269 glnA RPA4209 - glutamine synthetase II 4189 62.30 0 4753765..4754016 + 83 39937270 - RPA4210 - hypothetical protein 4190 65.81 0 4754118..4755053 - 311 39937271 glsA RPA4211 - glutaminase 4191 66.67 0 4755200..4755709 - 169 39937272 - RPA4212 - hypothetical protein 4192 62.86 0 4755696..4757351 - 551 39937273 - RPA4213 - sulfite reductase hemoprotein subunit 4193 67.94 0 4757362..4757676 - 104 39937274 - RPA4214 - hypothetical protein 4194 69.59 +1 4757673..4759109 - 478 39937275 cysG RPA4215 - uroporphyrin-III C-methyltransferase 4195 65.43 0 4759508..4761682 + 724 39937276 glcB RPA4216 - malate synthase G 4196 57.21 -2 4761873..4762073 + 66 39937277 - RPA4217 - hypothetical protein 4197 48.77 -2 4762211..4762372 - 53 39937278 - RPA4218 - hypothetical protein 4198 65.91 0 4762529..4763191 - 220 39937279 - RPA4219 - hypothetical protein 4199 67.19 0 4763214..4763981 - 255 39937280 - RPA4220 - ErfK/YbiS/YcfS/YnhG 4200 64.70 0 4764203..4765318 + 371 39937281 - RPA4221 - hypothetical protein 4201 65.91 0 4765452..4765847 - 131 39937282 - RPA4222 - hypothetical protein 4202 62.70 0 4766223..4767029 - 268 39937283 - RPA4223 - two-component response regulator 4203 54.39 -2 4767160..4767444 + 94 39937284 - RPA4224 - hypothetical protein 4204 63.55 0 4767444..4767989 + 181 39937285 - RPA4225 - RNA polymerase sigma factor 4205 64.18 0 4768147..4769913 - 588 39937286 - RPA4226 - signal transduction histidine kinase 4206 62.70 0 4770066..4770695 - 209 39937287 ureG RPA4227 - urease accessory protein UreG 4207 60.58 -1 4770919..4771263 + 114 39937288 - RPA4228 - hypothetical protein 4208 59.54 -1 4771282..4771632 + 116 39937289 - RPA4229 - hypothetical protein 4209 61.75 -1 4772098..4772382 + 94 39937290 - RPA4230 - hypothetical protein 4210 64.77 0 4772451..4774562 - 703 39937291 - RPA4231 - putative oxidoreductase 4211 65.75 0 4774697..4775023 + 108 39937292 - RPA4232 - hypothetical protein 4212 63.12 0 4775037..4776275 - 412 39937293 - RPA4233 - cyclic nucleotide regulated K+ channel 4213 61.67 -1 4776328..4777047 - 239 39937294 aadR RPA4234 - anaerobic aromatic degradation regulator 4214 62.50 0 4777176..4777559 + 127 39937295 - RPA4235 - putative cytochrome c, class I 4215 65.66 0 4777519..4778715 - 398 39937296 - RPA4236 - hypothetical protein 4216 65.00 0 4778728..4779507 - 259 39937297 - RPA4237 - ABC transporter ATP-binding protein 4217 62.80 0 4779510..4780646 - 378 39937298 - RPA4238 - hypothetical protein 4218 61.26 -1 4780758..4781219 + 153 39937299 - RPA4239 - hypothetical protein 4219 65.64 0 4781248..4783971 - 907 39937300 - RPA4240 - GCN5-related N-acetyltransferase 4220 56.23 -2 4784111..4784503 - 130 39937301 - RPA4241 - CBS domain-containing protein 4221 67.76 0 4784794..4786353 + 519 39937302 - RPA4242 - hypothetical protein 4222 64.52 0 4786335..4788101 - 588 39937303 phaC RPA4243 - putative poly-beta-hydroxyalkanoate synthase 4223 67.38 0 4788368..4789204 - 278 39937304 - RPA4244 - hypothetical protein 4224 64.75 0 4789394..4790227 + 277 39937305 - RPA4245 - hypothetical protein 4225 62.98 0 4790314..4791045 + 243 39937306 - RPA4246 - CBS/transport-associated domain-containing protein 4226 64.57 0 4791190..4792716 + 508 39937307 fixL RPA4247 - two component low oxygen sensor histidine kinase 4227 62.91 0 4792709..4793320 + 203 39937308 fixJ RPA4248 - response regulator FixJ 4228 64.12 0 4793406..4793798 + 130 39937309 - RPA4249 - response regulator receiver (CheY-like protein) 4229 66.67 0 4793997..4794689 + 230 39937310 fixK RPA4250 - transcriptional regulator FixK 4230 66.59 0 4795019..4796326 + 435 39937311 oahs RPA4251 - O-acetylhomoserine/O-acetylserine sulfhydrylase 4231 69.45 +1 4796479..4797843 - 454 39937312 nuoN2 RPA4252 - NADH dehydrogenase (quinone) 4232 66.39 0 4797854..4799296 - 480 39937313 nuoM2 RPA4253 - proton-translocating NADH-quinone oxidoreductase, chain M 4233 68.70 +1 4799287..4801356 - 689 39937314 nuoL2 RPA4254 - proton-translocating NADH-quinone oxidoreductase, chain L 4234 69.90 +1 4801359..4801667 - 102 39937315 nuoK2 RPA4255 - NADH-ubiquinone oxidoreductase, chain 4L 4235 66.27 0 4801664..4802170 - 168 39937316 nuoJ2 RPA4256 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 4236 65.33 0 4802167..4802688 - 173 39937317 nuoI2 RPA4257 - NADH dehydrogenase subunit I 4237 67.60 0 4802685..4803644 - 319 39937318 nuoH2 RPA4258 - respiratory-chain NADH dehydrogenase, subunit 1 4238 69.40 +1 4803641..4806274 - 877 39937319 nuoG2 RPA4259 - NADH dehydrogenase subunit G 4239 68.22 0 4806271..4807557 - 428 39937320 nuoF2 RPA4260 - NADH dehydrogenase (quinone) 4240 67.69 0 4807554..4808042 - 162 39937321 nuoE2 RPA4261 - NADH dehydrogenase subunit E 4241 64.95 0 4808039..4809784 - 581 39937322 nuoCD RPA4262 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 4242 66.03 0 4809781..4810407 - 208 39937323 nuoB2 RPA4263 - NADH-quinone oxidoreductase, B subunit 4243 68.46 +1 4810404..4810793 - 129 39937324 nuoA2 RPA4264 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0