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Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4117 66.15 0 4679786..4680169 - 127 39937198 - RPA4138 - phasin 2 4118 73.55 +2 4680511..4681149 - 212 39937199 - RPA4139 - hypothetical protein 4119 66.00 0 4683029..4684075 + 348 39937200 - RPA4140 - sensor histidine kinase 4120 59.13 -1 4684624..4684875 + 83 39937201 - RPA4141 - hypothetical protein 4121 58.52 -2 4684872..4685276 + 134 39937202 - RPA4142 - PilT protein, N-terminal 4122 67.51 0 4685360..4686070 + 236 39937203 nnrR RPA4143 - nitric oxide responsive transcriptional regulator NnrR 4123 62.67 0 4686043..4686267 - 74 39937204 - RPA4144 - hypothetical protein 4124 63.43 0 4686505..4687617 + 370 39937205 nirK2 RPA4145 - dissimilatory nitrite reductase 4125 69.05 +1 4687786..4688667 + 293 39937206 - RPA4146 - hypothetical protein 4126 66.67 0 4688895..4690361 + 488 39937207 - RPA4147 - thymidine phosphorylase 4127 67.00 0 4690358..4691269 + 303 39937208 prsA RPA4148 - phosphoribosylpyrophosphate synthetase 4128 65.87 0 4691266..4692894 + 542 39937209 - RPA4149 - Beta-lactamase-like 4129 65.66 0 4693308..4693706 - 132 39937210 - RPA4150 - hypothetical protein 4130 71.82 +2 4693809..4694681 + 290 39937211 - RPA4151 - LysR family transcriptional regulator 4131 65.68 0 4694801..4695811 + 336 39937212 fbpA RPA4152 - extracellular solute-binding protein, family 1 4132 69.53 +1 4695889..4697601 + 570 39937213 fpbB RPA4153 - binding-protein-dependent transport systems inner membrane component 4133 68.23 0 4697718..4698356 + 212 39937214 - RPA4154 - hypothetical protein 4134 62.83 0 4698521..4699171 - 216 39937215 - RPA4155 - 3-oxoacid CoA-transferase subunit B 4135 63.46 0 4699183..4699899 - 238 39937216 - RPA4156 - 3-oxoacid CoA-transferase subunit A 4136 67.91 0 4700050..4702053 + 667 39937217 - RPA4157 - hypothetical protein 4137 65.92 0 4702211..4703011 - 266 39937218 potI RPA4158 - binding-protein-dependent transport systems inner membrane component 4138 65.68 0 4703319..4704233 - 304 39937219 potH RPA4159 - binding-protein-dependent transport systems inner membrane component 4139 67.98 0 4704230..4705372 - 380 39937220 - RPA4160 - spermidine/putrescine ABC transporter ATP-binding subunit 4140 66.54 0 4705473..4706279 - 268 39937221 - RPA4161 - hypothetical protein 4141 67.03 0 4706510..4707343 + 277 39937222 - RPA4162 - putative taurine ABC transport system permease protein 4142 65.50 0 4707355..4708209 + 284 39937223 - RPA4163 - putative taurine transport system ATP-binding protein 4143 64.46 0 4708273..4709268 + 331 39937224 - RPA4164 - aliphatic sulfonate ABC transporter substrate-binding protein 4144 66.09 0 4709325..4710020 + 231 39937225 - RPA4165 - hypothetical protein 4145 68.66 +1 4710032..4710985 + 317 39937226 - RPA4166 - putative nitrilase 4146 65.50 0 4711028..4713766 - 912 39937227 - RPA4167 - diguanylate cyclase/phosphodiesterase 4147 67.57 0 4713876..4714976 + 366 39937228 - RPA4168 - FAD dependent oxidoreductase 4148 65.30 0 4715067..4715798 + 243 39937229 - RPA4169 - GntR family regulatory protein 4149 61.01 -1 4716074..4717276 + 400 39937230 - RPA4170 - branched chain amino-acid ABC transporter substrate-binding protein 4150 53.65 -2 4717693..4718007 - 104 39937231 - RPA4171 - hypothetical protein 4151 63.06 0 4718090..4718449 - 119 39937232 - RPA4172 - hypothetical protein 4152 68.39 0 4718430..4719182 - 250 39937233 - RPA4173 - putative diguanylate cyclase (GGDEF) 4153 69.53 +1 4719311..4719799 + 162 39937234 purE RPA4174 - phosphoribosylaminoimidazole carboxylase catalytic subunit 4154 66.76 0 4719796..4720896 + 366 39937235 purK RPA4175 - phosphoribosylaminoimidazole carboxylase, ATPase subunit 4155 64.39 0 4721053..4721316 + 87 39937236 rpsU RPA4176 - 30S ribosomal protein S21 4156 71.58 +2 4721493..4722368 - 291 39937237 - RPA4177 - hypothetical protein 4157 62.15 0 4722518..4722805 - 95 39937238 - RPA4178 - hypothetical protein 4158 61.60 -1 4723009..4723383 + 124 39937239 - RPA4179 - hypothetical protein 4159 65.24 0 4723562..4724965 - 467 39937240 pntB RPA4180 - NAD(P) transhydrogenase, beta subunit 4160 60.19 -1 4724979..4725302 - 107 39937241 pntA RPA4181 - nicotinamide nucleotide transhydrogenase, subunit alpha2 4161 66.76 0 4725328..4726455 - 375 39937242 pntA RPA4182 - NAD(P)(+) transhydrogenase (AB-specific) 4162 55.56 -2 4726655..4726807 - 50 39937243 - RPA4183 - hypothetical protein 4163 64.03 0 4727027..4727329 + 100 39937244 - RPA4184 - hypothetical protein 4164 64.53 0 4727285..4729201 - 638 39937245 - RPA4185 - peptidase M3B, oligoendopeptidase-like clade 3 4165 64.86 0 4729537..4730202 + 221 39937246 - RPA4186 - TerC family integral membrane protein 4166 65.86 0 4730298..4731785 + 495 39937247 - RPA4187 - two component sigma-54-dependent Fis family transcriptional regulator 4167 67.86 0 4732135..4734309 + 724 39937248 - RPA4188 - hypothetical protein 4168 69.74 +1 4734594..4736255 + 553 39937249 - RPA4189 - hypothetical protein 4169 64.36 0 4736383..4736772 - 129 39937250 - RPA4190 - hypothetical protein 4170 63.67 0 4736843..4737142 - 99 39937251 - RPA4191 - hypothetical protein 4171 66.50 0 4737334..4737918 + 194 39937252 - RPA4192 - hypothetical protein 4172 66.95 0 4737915..4739348 + 477 39937253 pyk RPA4193 - pyruvate kinase 4173 63.40 0 4739575..4740003 - 142 39937254 osmC RPA4194 - OsmC-like protein 4174 67.16 0 4740000..4741004 - 334 39937255 - RPA4195 - alpha/beta hydrolase fold 4175 64.86 0 4741075..4741737 - 220 39937256 - RPA4196 - TPR repeat-containing protein 4176 62.70 0 4741835..4741960 - 41 39937257 rpmJ RPA4197 - 50S ribosomal protein L36 4177 62.53 0 4742272..4743141 + 289 39937258 - RPA4198 - amidohydrolase 2 4178 65.99 0 4743290..4744027 + 245 39937259 - RPA4199 - putative 2-haloacid halidohydrolase IVA 4179 66.46 0 4744104..4744586 + 160 39937260 - RPA4200 - YbaK/prolyl-tRNA synthetase associated domain-containing protein 4180 67.70 0 4744660..4744950 - 96 39937261 - RPA4201 - hypothetical protein 4181 67.04 0 4745124..4746449 - 441 39937262 - RPA4202 - methyl-accepting chemotaxis sensory transducer 4182 58.24 -2 4746424..4746945 - 173 39937263 - RPA4203 - methyl-accepting chemotaxis sensory transducer 4183 60.15 -1 4747181..4747441 - 86 39937264 - RPA4204 - hypothetical protein 4184 66.67 0 4747662..4749023 + 453 39937265 - RPA4205 - PST family polysaccharide export protein 4185 64.89 0 4749468..4750256 - 262 39937266 - RPA4206 - 3-hydroxybutyrate dehydrogenase 4186 63.68 0 4750305..4751444 - 379 39937267 - RPA4207 - patatin-like phospholipase domain-containing protein 4187 64.73 0 4751539..4752054 - 171 39937268 - RPA4208 - allergen V5/Tpx-1-like protein 4188 62.14 0 4752301..4753338 - 345 39937269 glnA RPA4209 - glutamine synthetase II 4189 62.30 0 4753765..4754016 + 83 39937270 - RPA4210 - hypothetical protein 4190 65.81 0 4754118..4755053 - 311 39937271 glsA RPA4211 - glutaminase 4191 66.67 0 4755200..4755709 - 169 39937272 - RPA4212 - hypothetical protein 4192 62.86 0 4755696..4757351 - 551 39937273 - RPA4213 - sulfite reductase hemoprotein subunit 4193 67.94 0 4757362..4757676 - 104 39937274 - RPA4214 - hypothetical protein 4194 69.59 +1 4757673..4759109 - 478 39937275 cysG RPA4215 - uroporphyrin-III C-methyltransferase 4195 65.43 0 4759508..4761682 + 724 39937276 glcB RPA4216 - malate synthase G 4196 57.21 -2 4761873..4762073 + 66 39937277 - RPA4217 - hypothetical protein 4197 48.77 -2 4762211..4762372 - 53 39937278 - RPA4218 - hypothetical protein 4198 65.91 0 4762529..4763191 - 220 39937279 - RPA4219 - hypothetical protein 4199 67.19 0 4763214..4763981 - 255 39937280 - RPA4220 - ErfK/YbiS/YcfS/YnhG 4200 64.70 0 4764203..4765318 + 371 39937281 - RPA4221 - hypothetical protein 4201 65.91 0 4765452..4765847 - 131 39937282 - RPA4222 - hypothetical protein 4202 62.70 0 4766223..4767029 - 268 39937283 - RPA4223 - two-component response regulator 4203 54.39 -2 4767160..4767444 + 94 39937284 - RPA4224 - hypothetical protein 4204 63.55 0 4767444..4767989 + 181 39937285 - RPA4225 - RNA polymerase sigma factor 4205 64.18 0 4768147..4769913 - 588 39937286 - RPA4226 - signal transduction histidine kinase 4206 62.70 0 4770066..4770695 - 209 39937287 ureG RPA4227 - urease accessory protein UreG 4207 60.58 -1 4770919..4771263 + 114 39937288 - RPA4228 - hypothetical protein 4208 59.54 -1 4771282..4771632 + 116 39937289 - RPA4229 - hypothetical protein 4209 61.75 -1 4772098..4772382 + 94 39937290 - RPA4230 - hypothetical protein 4210 64.77 0 4772451..4774562 - 703 39937291 - RPA4231 - putative oxidoreductase 4211 65.75 0 4774697..4775023 + 108 39937292 - RPA4232 - hypothetical protein 4212 63.12 0 4775037..4776275 - 412 39937293 - RPA4233 - cyclic nucleotide regulated K+ channel 4213 61.67 -1 4776328..4777047 - 239 39937294 aadR RPA4234 - anaerobic aromatic degradation regulator 4214 62.50 0 4777176..4777559 + 127 39937295 - RPA4235 - putative cytochrome c, class I 4215 65.66 0 4777519..4778715 - 398 39937296 - RPA4236 - hypothetical protein 4216 65.00 0 4778728..4779507 - 259 39937297 - RPA4237 - ABC transporter ATP-binding protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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