version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4061 59.74 -1 4619836..4621062 + 408 39937142 - RPA4082 - phage-like integrase 4062 58.86 -2 4621775..4622530 + 251 39937143 - RPA4083 - hypothetical protein 4063 68.27 0 4622490..4624481 + 663 39937144 - RPA4084 - AAA ATPase 4064 58.53 -2 4624551..4625177 + 208 39937145 - RPA4085 - TetR family transcriptional regulator 4065 58.85 -2 4625458..4626570 - 370 39937146 - RPA4086 - ABC transporter permease 4066 63.70 0 4626573..4629368 - 931 39937147 - RPA4087 - ABC-2 type transport system permease and double ATP-binding protein fusion 4067 63.42 0 4629365..4630441 - 358 39937148 - RPA4088 - HlyD family secretion protein 4068 60.62 -1 4630485..4631675 - 396 39937149 - RPA4089 - patatin-like phospholipase domain-containing protein 4069 61.99 -1 4631838..4632479 - 213 39937150 - RPA4090 - hypothetical protein 4070 60.34 -1 4632585..4633280 + 231 39937151 - RPA4091 - TetR family transcriptional regulator 4071 64.17 0 4633402..4634001 - 199 39937152 - RPA4092 - hypothetical protein 4072 58.73 -2 4634191..4634442 - 83 39937153 - RPA4093 - hypothetical protein 4073 62.49 0 4634535..4635371 - 278 39937154 - RPA4094 - hypothetical protein 4074 63.40 0 4635409..4638561 - 1050 39937155 - RPA4095 - putative multidrug-efflux transport protein mexF 4075 66.67 0 4638566..4639741 - 391 39937156 - RPA4096 - multidrug efflux membrane fusion protein mexE 4076 63.64 0 4639835..4640461 + 208 39937157 - RPA4097 - TetR family transcriptional regulator 4077 67.53 0 4640831..4641529 + 232 39937158 - RPA4098 - putative RNA polymerase ECF-type sigma factor 4078 61.32 -1 4641574..4641816 + 80 39937159 - RPA4099 - hypothetical protein 4079 62.53 0 4641838..4642200 + 120 39937160 - RPA4100 - hypothetical protein 4080 65.49 0 4642335..4642760 + 141 39937161 - RPA4101 - putative organic hydroperoxide resistance protein 4081 63.42 0 4642801..4643262 + 153 39937162 - RPA4102 - MarR family transcriptional regulator 4082 59.46 -1 4643266..4643931 + 221 39937163 - RPA4103 - glutathione S-transferase 4083 60.44 -1 4644066..4644707 - 213 39937164 - RPA4104 - hypothetical protein 4084 62.14 0 4645025..4646239 + 404 39937165 rmrA RPA4105 - hlyD family multidrug secretion protein 4085 61.96 -1 4646236..4647786 + 516 39937166 rmrB RPA4106 - multidrug efflux pump 4086 64.26 0 4647970..4649298 + 442 39937167 oprN RPA4107 - putative outer membrane efflux protein OprN precursor 4087 60.54 -1 4649318..4649986 + 222 39937168 - RPA4108 - TetR family transcriptional regulator 4088 53.65 -2 4650058..4650372 + 104 39937169 - RPA4109 - hypothetical protein 4089 59.82 -1 4650930..4652696 + 588 39937170 mycA RPA4110 - myosin-crossreactive antigen 4090 63.07 0 4652962..4653267 + 101 39937171 - RPA4111 - hypothetical protein 4091 59.96 -1 4654732..4655625 + 297 39937172 - RPA4112 - putative diguanylate cyclase (GGDEF) 4092 64.17 0 4656317..4657198 + 293 39937173 - RPA4113 - putative conjugal transfer protein trbB 4093 61.00 -1 4657318..4658322 + 334 39937174 - RPA4114 - LysR family transcriptional regulator 4094 66.02 0 4658541..4659776 - 411 39937175 trbI2 RPA4115 - putative conjugal transfer protein trbI 4095 63.78 0 4659776..4660816 - 346 39937176 trbG2 RPA4116 - conjugal transfer protein trbG 4096 64.04 0 4660813..4661496 - 227 39937177 trbF2 RPA4117 - conjugal transfer protein trbF 4097 65.90 0 4661500..4662795 - 431 39937178 - RPA4118 - conjugal transfer protein trbL 4098 64.08 0 4662799..4663185 - 128 39937179 - RPA4119 - TrbK 4099 63.96 0 4663182..4663919 - 245 39937180 - RPA4120 - conjugal transfer protein trbJ 4100 64.09 0 4663916..4666357 - 813 39937181 trbE2 RPA4121 - conjugal transfer protein trbE 4101 67.80 0 4666367..4666630 - 87 39937182 - RPA4122 - conjugal transfer protein TrbD 4102 63.19 0 4666630..4666974 - 114 39937183 trbC2 RPA4123 - conjugal transfer protein trbC 4103 68.11 0 4666971..4667939 - 322 39937184 trbB2 RPA4124 - conjugal transfer protein trbB 4104 53.97 -2 4668297..4668737 - 146 39937185 - RPA4125 - hypothetical protein 4105 53.78 -2 4668694..4669896 - 400 39937186 - RPA4126 - hypothetical protein 4106 54.81 -2 4669871..4670587 - 238 39937187 - RPA4127 - hypothetical protein 4107 61.73 -1 4670603..4670845 - 80 39937188 - RPA4128 - hypothetical protein 4108 56.70 -2 4670965..4671315 + 116 39937189 - RPA4129 - XRE family transcriptional regulator 4109 58.05 -2 4671312..4672205 + 297 39937190 - RPA4130 - hypothetical protein 4110 60.65 -1 4672420..4672884 - 154 39937191 - RPA4131 - CopG family protein 4111 63.51 0 4672894..4674888 - 664 39937192 traG1 RPA4132 - plasmid transfer factor, traG 4112 64.67 0 4675022..4675321 - 99 39937193 - RPA4133 - hypothetical protein 4113 57.71 -2 4675429..4675707 + 92 39937194 - RPA4134 - XRE family transcriptional regulator 4114 64.46 0 4675844..4676341 - 165 39937195 - RPA4135 - GCN5-related N-acetyltransferase 4115 64.05 0 4676616..4678526 + 636 39937196 - RPA4136 - DNA topoisomerase 4116 62.96 0 4679131..4679562 - 143 39937197 - RPA4137 - hypothetical protein 4117 66.15 0 4679786..4680169 - 127 39937198 - RPA4138 - phasin 2 4118 73.55 +2 4680511..4681149 - 212 39937199 - RPA4139 - hypothetical protein 4119 66.00 0 4683029..4684075 + 348 39937200 - RPA4140 - sensor histidine kinase 4120 59.13 -1 4684624..4684875 + 83 39937201 - RPA4141 - hypothetical protein 4121 58.52 -2 4684872..4685276 + 134 39937202 - RPA4142 - PilT protein, N-terminal 4122 67.51 0 4685360..4686070 + 236 39937203 nnrR RPA4143 - nitric oxide responsive transcriptional regulator NnrR 4123 62.67 0 4686043..4686267 - 74 39937204 - RPA4144 - hypothetical protein 4124 63.43 0 4686505..4687617 + 370 39937205 nirK2 RPA4145 - dissimilatory nitrite reductase 4125 69.05 +1 4687786..4688667 + 293 39937206 - RPA4146 - hypothetical protein 4126 66.67 0 4688895..4690361 + 488 39937207 - RPA4147 - thymidine phosphorylase 4127 67.00 0 4690358..4691269 + 303 39937208 prsA RPA4148 - phosphoribosylpyrophosphate synthetase 4128 65.87 0 4691266..4692894 + 542 39937209 - RPA4149 - Beta-lactamase-like 4129 65.66 0 4693308..4693706 - 132 39937210 - RPA4150 - hypothetical protein 4130 71.82 +2 4693809..4694681 + 290 39937211 - RPA4151 - LysR family transcriptional regulator 4131 65.68 0 4694801..4695811 + 336 39937212 fbpA RPA4152 - extracellular solute-binding protein, family 1 4132 69.53 +1 4695889..4697601 + 570 39937213 fpbB RPA4153 - binding-protein-dependent transport systems inner membrane component 4133 68.23 0 4697718..4698356 + 212 39937214 - RPA4154 - hypothetical protein 4134 62.83 0 4698521..4699171 - 216 39937215 - RPA4155 - 3-oxoacid CoA-transferase subunit B 4135 63.46 0 4699183..4699899 - 238 39937216 - RPA4156 - 3-oxoacid CoA-transferase subunit A 4136 67.91 0 4700050..4702053 + 667 39937217 - RPA4157 - hypothetical protein 4137 65.92 0 4702211..4703011 - 266 39937218 potI RPA4158 - binding-protein-dependent transport systems inner membrane component 4138 65.68 0 4703319..4704233 - 304 39937219 potH RPA4159 - binding-protein-dependent transport systems inner membrane component 4139 67.98 0 4704230..4705372 - 380 39937220 - RPA4160 - spermidine/putrescine ABC transporter ATP-binding subunit 4140 66.54 0 4705473..4706279 - 268 39937221 - RPA4161 - hypothetical protein 4141 67.03 0 4706510..4707343 + 277 39937222 - RPA4162 - putative taurine ABC transport system permease protein 4142 65.50 0 4707355..4708209 + 284 39937223 - RPA4163 - putative taurine transport system ATP-binding protein 4143 64.46 0 4708273..4709268 + 331 39937224 - RPA4164 - aliphatic sulfonate ABC transporter substrate-binding protein 4144 66.09 0 4709325..4710020 + 231 39937225 - RPA4165 - hypothetical protein 4145 68.66 +1 4710032..4710985 + 317 39937226 - RPA4166 - putative nitrilase 4146 65.50 0 4711028..4713766 - 912 39937227 - RPA4167 - diguanylate cyclase/phosphodiesterase 4147 67.57 0 4713876..4714976 + 366 39937228 - RPA4168 - FAD dependent oxidoreductase 4148 65.30 0 4715067..4715798 + 243 39937229 - RPA4169 - GntR family regulatory protein 4149 61.01 -1 4716074..4717276 + 400 39937230 - RPA4170 - branched chain amino-acid ABC transporter substrate-binding protein 4150 53.65 -2 4717693..4718007 - 104 39937231 - RPA4171 - hypothetical protein 4151 63.06 0 4718090..4718449 - 119 39937232 - RPA4172 - hypothetical protein 4152 68.39 0 4718430..4719182 - 250 39937233 - RPA4173 - putative diguanylate cyclase (GGDEF) 4153 69.53 +1 4719311..4719799 + 162 39937234 purE RPA4174 - phosphoribosylaminoimidazole carboxylase catalytic subunit 4154 66.76 0 4719796..4720896 + 366 39937235 purK RPA4175 - phosphoribosylaminoimidazole carboxylase, ATPase subunit 4155 64.39 0 4721053..4721316 + 87 39937236 rpsU RPA4176 - 30S ribosomal protein S21 4156 71.58 +2 4721493..4722368 - 291 39937237 - RPA4177 - hypothetical protein 4157 62.15 0 4722518..4722805 - 95 39937238 - RPA4178 - hypothetical protein 4158 61.60 -1 4723009..4723383 + 124 39937239 - RPA4179 - hypothetical protein 4159 65.24 0 4723562..4724965 - 467 39937240 pntB RPA4180 - NAD(P) transhydrogenase, beta subunit 4160 60.19 -1 4724979..4725302 - 107 39937241 pntA RPA4181 - nicotinamide nucleotide transhydrogenase, subunit alpha2 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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