version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3737 67.96 0 4253100..4253639 - 179 39936818 - RPA3757 - MarR family transcriptional regulator 3738 65.30 0 4253885..4254691 + 268 39936819 hpcG RPA3758 - 2-oxo-hepta-3-ene-1,7-dioate hydratase 3739 64.16 0 4254712..4255110 + 132 39936820 hpcD RPA3759 - putative 5-carboxymethyl-2-hydroxymuconate isomerase 3740 66.67 0 4255103..4256644 + 513 39936821 hpcC RPA3760 - 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase 3741 64.52 0 4256841..4257818 + 325 39936822 - RPA3761 - putative catechol 2,3-dioxygenase 3742 66.09 0 4257949..4258821 + 290 39936823 - RPA3762 - putative 2-oxo-3-ene-1,7-dioic acid hydratase 3743 67.96 0 4258850..4260475 + 541 39936824 ilvB RPA3763 - hypothetical protein 3744 65.93 0 4260666..4261754 - 362 39936825 - RPA3764 - phenylacetate-CoA oxygenase/reductase, PaaK subunit 3745 68.25 0 4261763..4262266 - 167 39936826 paaD RPA3765 - phenylacetate-CoA oxygenase, PaaJ subunit 3746 65.12 0 4262260..4263036 - 258 39936827 paaC RPA3766 - phenylacetate-CoA oxygenase, PaaI subunit 3747 66.67 0 4263153..4263440 - 95 39936828 paaB RPA3767 - phenylacetate-CoA oxygenase subunit PaaB 3748 65.85 0 4263613..4264596 - 327 39936829 paaA RPA3768 - phenylacetate-CoA oxygenase subunit PaaA 3749 65.79 0 4264719..4265399 + 226 39936830 - RPA3769 - TetR family transcriptional regulator 3750 61.11 -1 4265634..4266137 - 167 39936831 - RPA3770 - phasin 2 3751 65.73 0 4266349..4266669 - 106 39936832 - RPA3771 - hypothetical protein 3752 68.31 0 4266718..4267509 - 263 39936833 - RPA3772 - hypothetical protein 3753 57.65 -2 4267528..4267782 - 84 39936834 - RPA3773 - hypothetical protein 3754 69.30 +1 4267873..4269126 - 417 39936835 - RPA3774 - D-amino-acid dehydrogenase 3755 64.22 0 4269405..4272509 - 1034 39936836 - RPA3775 - acriflavin resistance protein 3756 65.83 0 4272651..4273844 - 397 39936837 - RPA3776 - RND efflux membrane fusion protein precursor 3757 64.25 0 4273846..4274547 - 233 39936838 - RPA3777 - TetR family transcriptional regulator 3758 67.24 0 4274767..4275987 + 406 39936839 - RPA3778 - putative cytochrome p450-like enzyme 3759 69.23 +1 4276159..4277718 + 519 39936840 - RPA3779 - hypothetical protein 3760 69.76 +1 4277730..4278602 - 290 39936841 - RPA3780 - hypothetical protein 3761 64.88 0 4278937..4279830 + 297 39936842 yihV RPA3781 - PfkB 3762 66.26 0 4279934..4281151 - 405 39936843 - RPA3782 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3763 67.94 0 4281276..4282772 - 498 39936844 - RPA3783 - glycosyl transferase family protein 3764 65.61 0 4282780..4283916 - 378 39936845 - RPA3784 - dolichyl-phosphate beta-D-mannosyltransferase 3765 61.09 -1 4284169..4284975 + 268 39936846 - RPA3785 - hypothetical protein 3766 60.47 -1 4285121..4285378 + 85 39936847 - RPA3786 - hypothetical protein 3767 66.56 0 4285476..4286378 + 300 39936848 - RPA3787 - hypothetical protein 3768 64.28 0 4286411..4287583 - 390 39936849 - RPA3788 - putative ABC transporter, ATP-binding protein 3769 66.77 0 4287580..4288533 - 317 39936850 - RPA3789 - putative ATP-binding component of a transport system 3770 65.17 0 4288530..4289333 - 267 39936851 - RPA3790 - putative efflux protein 3771 69.18 +1 4289330..4290046 - 238 39936852 - RPA3791 - TetR family transcriptional regulator 3772 67.37 0 4290117..4291256 - 379 39936853 - RPA3792 - putative diguanylate cyclase (GGDEF) 3773 63.02 0 4291644..4292054 - 136 39936854 - RPA3793 - hypothetical protein 3774 66.96 0 4292116..4292460 - 114 39936855 - RPA3794 - hypothetical protein 3775 67.99 0 4292609..4293361 - 250 39936856 - RPA3795 - putative enoyl-CoA hydratase 3776 68.23 0 4293461..4294291 + 276 39936857 - RPA3796 - LysR family transcriptional regulator 3777 68.98 +1 4294303..4295904 - 533 39936858 - RPA3797 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3778 67.38 0 4295901..4296602 - 233 39936859 - RPA3798 - xanthine dehydrogenase accessory factor 3779 67.58 0 4296633..4296959 - 108 39936860 - RPA3799 - hypothetical protein 3780 67.08 0 4296995..4298212 - 405 39936861 - RPA3800 - VWA domain CoxE-like family protein 3781 66.33 0 4298538..4299440 - 300 39936862 - RPA3801 - ATPase 3782 66.42 0 4299460..4300266 - 268 39936863 - RPA3802 - carbon monoxide dehydrogenase medium subunit 3783 64.20 0 4300342..4300827 - 161 39936864 - RPA3803 - carbon-monoxide dehydrogenase small subunit 3784 63.23 0 4301003..4301467 - 154 39936865 - RPA3804 - hypothetical protein 3785 64.20 0 4301663..4302190 - 175 39936866 - RPA3805 - hypothetical protein 3786 63.18 0 4303024..4303941 + 305 39936867 livH RPA3806 - inner-membrane translocator 3787 66.29 0 4303954..4305285 + 443 39936868 livM RPA3807 - inner-membrane translocator 3788 66.31 0 4305282..4306118 + 278 39936869 livG RPA3808 - branched chain amino acid ABC transporter ATP-binding protein 3789 67.61 0 4306255..4306995 + 246 39936870 livF RPA3809 - branched chain amino acid ABC transporter ATP-binding protein 3790 63.23 0 4307174..4308280 + 368 39936871 livK RPA3810 - extracellular ligand-binding receptor 3791 56.60 -2 4308492..4308779 - 95 39936872 - RPA3811 - excinuclease ABC subunit C 3792 65.71 0 4309058..4309792 - 244 39936873 - RPA3812 - cytochrome c biogenesis protein, transmembrane region 3793 69.05 +1 4309894..4310943 + 349 39936874 - RPA3813 - T4 family peptidase 3794 64.98 0 4311084..4311854 - 256 39936875 - RPA3814 - calcium-binding EF-hand 3795 65.81 0 4312124..4312822 + 232 39936876 cbbE RPA3815 - ribulose-phosphate 3-epimerase 3796 62.86 0 4312829..4313380 - 183 39936877 - RPA3816 - hypothetical protein 3797 66.21 0 4313465..4314772 + 435 39936878 purB RPA3817 - adenylosuccinate lyase 3798 66.52 0 4315019..4315720 - 233 39936879 purL RPA3818 - phosphoribosylformylglycinamidine synthase I 3799 52.92 -2 4315777..4316016 - 79 39936880 - RPA3819 - hypothetical protein 3800 65.04 0 4316040..4316285 - 81 39936881 - RPA3820 - phosphoribosylformylglycinamidine synthase subunit PurS 3801 61.85 -1 4316467..4317234 - 255 39936882 purC2 RPA3821 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3802 64.81 0 4317533..4317856 + 107 39936883 - RPA3822 - hypothetical protein 3803 68.15 0 4318428..4319102 + 224 39936884 - RPA3823 - hypothetical protein 3804 65.24 0 4319994..4320344 - 116 39936885 - RPA3824 - hypothetical protein 3805 69.49 +1 4320433..4321281 - 282 39936886 - RPA3825 - hypothetical protein 3806 59.94 -1 4321678..4322034 + 118 39936887 - RPA3826 - hypothetical protein 3807 61.11 -1 4322038..4322361 + 107 39936888 - RPA3827 - hypothetical protein 3808 64.14 0 4322486..4322683 + 65 39936889 - RPA3828 - XRE family transcriptional regulator 3809 67.80 0 4323708..4324238 - 176 39936890 - RPA3829 - transcription elongation factor regulatory protein 3810 61.41 -1 4324251..4324745 - 164 39936891 - RPA3830 - G/U mismatch-specific DNA glycosylase 3811 69.65 +1 4324785..4325186 - 133 39936892 - RPA3831 - hypothetical protein 3812 65.45 0 4325281..4326351 - 356 39936893 - RPA3832 - diguanylate cyclase 3813 70.12 +1 4326454..4327668 - 404 39936894 rrm2 RPA3833 - tRNA/rRNA methyltransferase 3814 62.92 0 4328043..4329269 + 408 39936895 idh RPA3834 - isocitrate dehydrogenase 3815 56.29 -2 4329349..4330659 - 436 39936896 - RPA3835 - hypothetical protein 3816 63.74 0 4331612..4332532 - 306 39936897 - RPA3836 - integrase catalytic subunit 3817 58.05 -2 4332529..4332795 - 88 39936898 - RPA3837 - insertion element ISR1 3818 67.57 0 4333101..4333433 + 110 39936899 - RPA3838 - hypothetical protein 3819 65.83 0 4333604..4334443 + 279 39936900 pchR RPA3839 - transcriptional regulator PchR 3820 64.55 0 4334584..4336893 + 769 39936901 - RPA3840 - putative hydroxamate-type ferrisiderophore receptor 3821 67.98 0 4336914..4337444 + 176 39936902 - RPA3841 - hypothetical protein 3822 67.03 0 4337441..4338550 + 369 39936903 - RPA3842 - hypothetical protein 3823 66.72 0 4338580..4340313 - 577 39936904 kefC RPA3843 - potassium efflux system protein 3824 67.68 0 4340497..4342275 + 592 39936905 kefB RPA3844 - sodium/hydrogen exchanger 3825 65.70 0 4342505..4344463 + 652 39936906 - RPA3845 - membrane transporter 3826 67.85 0 4344559..4345320 - 253 39936907 - RPA3846 - GCN5-related N-acetyltransferase 3827 66.14 0 4345322..4347991 - 889 39936908 alaS RPA3847 - alanyl-tRNA synthetase 3828 68.15 0 4348444..4349592 + 382 39936909 gcvT2 RPA3848 - glycine cleavage system aminomethyltransferase T 3829 64.21 0 4349602..4349967 + 121 39936910 - RPA3849 - glycine cleavage system H protein 3830 67.74 0 4350069..4353041 + 990 39936911 gcvP RPA3850 - glycine dehydrogenase 3831 64.10 0 4353490..4354581 - 363 39936912 recA RPA3851 - recombinase A 3832 57.67 -2 4354998..4355564 - 188 39936913 - RPA3852 - hypothetical protein 3833 63.80 0 4355837..4356952 + 371 39936914 - RPA3853 - hypothetical protein 3834 57.94 -2 4357103..4357480 + 125 39936915 - RPA3854 - hypothetical protein 3835 66.12 0 4357821..4358735 + 304 39936916 - RPA3855 - hypothetical protein 3836 61.39 -1 4358739..4359098 + 119 39936917 - RPA3856 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0