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Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3706 61.28 -1 4209434..4209934 - 166 39936787 - RPA3726 - hypothetical protein 3707 67.63 0 4210179..4211219 + 346 39936788 - RPA3727 - CorA metal Ion (Mg2+/Co2+) transporter (MIT) family protein 3708 68.06 0 4211408..4213420 + 670 39936789 - RPA3728 - hypothetical protein 3709 68.63 +1 4213681..4214853 - 390 39936790 - RPA3729 - peptidase M20D, amidohydrolase 3710 67.96 0 4214978..4216597 + 539 39936791 - RPA3730 - GMC-type oxidoreductase 3711 68.33 0 4216597..4217499 + 300 39936792 - RPA3731 - alpha/beta fold hydrolase 3712 64.80 0 4217524..4218915 - 463 39936793 argD1 RPA3732 - aminotransferase class-III 3713 64.68 0 4219247..4221859 - 870 39936794 - RPA3733 - hypothetical protein 3714 64.50 0 4222189..4223109 + 306 39936795 ispH RPA3734 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3715 63.82 0 4223149..4224309 + 386 39936796 - RPA3735 - radical SAM family protein 3716 63.68 0 4224384..4225388 - 334 39936797 pstS2 RPA3736 - putative phosphate transport system substrate-binding protein 3717 64.74 0 4225422..4226666 - 414 39936798 - RPA3737 - putative phosphonoacetate hydrolase 3718 63.86 0 4226824..4227714 + 296 39936799 - RPA3738 - LysR family transcriptional regulator 3719 67.47 0 4227805..4228548 - 247 39936800 - RPA3739 - hypothetical protein 3720 65.24 0 4228545..4230506 - 653 39936801 sqhC RPA3740 - squalene cyclase 3721 69.69 +1 4230540..4231796 - 418 39936802 - RPA3741 - amine oxidase 3722 66.67 0 4231796..4232635 - 279 39936803 - RPA3742 - squalene/phytoene synthase 3723 64.73 0 4232632..4233510 - 292 39936804 - RPA3743 - squalene/phytoene synthase 3724 61.25 -1 4233715..4233954 - 79 39936805 - RPA3744 - hypothetical protein 3725 66.87 0 4234344..4234847 + 167 39936806 - RPA3745 - hypothetical protein 3726 65.36 0 4234942..4237311 - 789 39936807 - RPA3746 - RND superfamily transporter 3727 72.53 +2 4237519..4238286 - 255 39936808 eutC RPA3747 - ethanolamine ammonia-lyase small subunit 3728 61.68 -1 4238294..4239877 - 527 39936809 - RPA3748 - radical SAM family protein 3729 65.65 0 4240105..4241487 - 460 39936810 eutB RPA3749 - ethanolamine ammonia lyase large subunit 3730 66.73 0 4241549..4243252 - 567 39936811 - RPA3750 - methyl-accepting chemotaxis sensory transducer 3731 61.84 -1 4243306..4243761 - 151 39936812 - RPA3751 - hypothetical protein 3732 67.80 0 4243965..4244843 - 292 39936813 - RPA3752 - transglutaminase-like domain-containing protein 3733 69.54 +1 4244840..4247341 - 833 39936814 - RPA3753 - hypothetical protein 3734 65.84 0 4247367..4250762 - 1131 39936815 - RPA3754 - transglutaminase-like domain-containing protein 3735 63.32 0 4251014..4251790 - 258 39936816 hpcH RPA3755 - HpcH/HpaI aldolase 3736 67.40 0 4251974..4253059 - 361 39936817 - RPA3756 - malate dehydrogenase-like protein 3737 67.96 0 4253100..4253639 - 179 39936818 - RPA3757 - MarR family transcriptional regulator 3738 65.30 0 4253885..4254691 + 268 39936819 hpcG RPA3758 - 2-oxo-hepta-3-ene-1,7-dioate hydratase 3739 64.16 0 4254712..4255110 + 132 39936820 hpcD RPA3759 - putative 5-carboxymethyl-2-hydroxymuconate isomerase 3740 66.67 0 4255103..4256644 + 513 39936821 hpcC RPA3760 - 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase 3741 64.52 0 4256841..4257818 + 325 39936822 - RPA3761 - putative catechol 2,3-dioxygenase 3742 66.09 0 4257949..4258821 + 290 39936823 - RPA3762 - putative 2-oxo-3-ene-1,7-dioic acid hydratase 3743 67.96 0 4258850..4260475 + 541 39936824 ilvB RPA3763 - hypothetical protein 3744 65.93 0 4260666..4261754 - 362 39936825 - RPA3764 - phenylacetate-CoA oxygenase/reductase, PaaK subunit 3745 68.25 0 4261763..4262266 - 167 39936826 paaD RPA3765 - phenylacetate-CoA oxygenase, PaaJ subunit 3746 65.12 0 4262260..4263036 - 258 39936827 paaC RPA3766 - phenylacetate-CoA oxygenase, PaaI subunit 3747 66.67 0 4263153..4263440 - 95 39936828 paaB RPA3767 - phenylacetate-CoA oxygenase subunit PaaB 3748 65.85 0 4263613..4264596 - 327 39936829 paaA RPA3768 - phenylacetate-CoA oxygenase subunit PaaA 3749 65.79 0 4264719..4265399 + 226 39936830 - RPA3769 - TetR family transcriptional regulator 3750 61.11 -1 4265634..4266137 - 167 39936831 - RPA3770 - phasin 2 3751 65.73 0 4266349..4266669 - 106 39936832 - RPA3771 - hypothetical protein 3752 68.31 0 4266718..4267509 - 263 39936833 - RPA3772 - hypothetical protein 3753 57.65 -2 4267528..4267782 - 84 39936834 - RPA3773 - hypothetical protein 3754 69.30 +1 4267873..4269126 - 417 39936835 - RPA3774 - D-amino-acid dehydrogenase 3755 64.22 0 4269405..4272509 - 1034 39936836 - RPA3775 - acriflavin resistance protein 3756 65.83 0 4272651..4273844 - 397 39936837 - RPA3776 - RND efflux membrane fusion protein precursor 3757 64.25 0 4273846..4274547 - 233 39936838 - RPA3777 - TetR family transcriptional regulator 3758 67.24 0 4274767..4275987 + 406 39936839 - RPA3778 - putative cytochrome p450-like enzyme 3759 69.23 +1 4276159..4277718 + 519 39936840 - RPA3779 - hypothetical protein 3760 69.76 +1 4277730..4278602 - 290 39936841 - RPA3780 - hypothetical protein 3761 64.88 0 4278937..4279830 + 297 39936842 yihV RPA3781 - PfkB 3762 66.26 0 4279934..4281151 - 405 39936843 - RPA3782 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3763 67.94 0 4281276..4282772 - 498 39936844 - RPA3783 - glycosyl transferase family protein 3764 65.61 0 4282780..4283916 - 378 39936845 - RPA3784 - dolichyl-phosphate beta-D-mannosyltransferase 3765 61.09 -1 4284169..4284975 + 268 39936846 - RPA3785 - hypothetical protein 3766 60.47 -1 4285121..4285378 + 85 39936847 - RPA3786 - hypothetical protein 3767 66.56 0 4285476..4286378 + 300 39936848 - RPA3787 - hypothetical protein 3768 64.28 0 4286411..4287583 - 390 39936849 - RPA3788 - putative ABC transporter, ATP-binding protein 3769 66.77 0 4287580..4288533 - 317 39936850 - RPA3789 - putative ATP-binding component of a transport system 3770 65.17 0 4288530..4289333 - 267 39936851 - RPA3790 - putative efflux protein 3771 69.18 +1 4289330..4290046 - 238 39936852 - RPA3791 - TetR family transcriptional regulator 3772 67.37 0 4290117..4291256 - 379 39936853 - RPA3792 - putative diguanylate cyclase (GGDEF) 3773 63.02 0 4291644..4292054 - 136 39936854 - RPA3793 - hypothetical protein 3774 66.96 0 4292116..4292460 - 114 39936855 - RPA3794 - hypothetical protein 3775 67.99 0 4292609..4293361 - 250 39936856 - RPA3795 - putative enoyl-CoA hydratase 3776 68.23 0 4293461..4294291 + 276 39936857 - RPA3796 - LysR family transcriptional regulator 3777 68.98 +1 4294303..4295904 - 533 39936858 - RPA3797 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3778 67.38 0 4295901..4296602 - 233 39936859 - RPA3798 - xanthine dehydrogenase accessory factor 3779 67.58 0 4296633..4296959 - 108 39936860 - RPA3799 - hypothetical protein 3780 67.08 0 4296995..4298212 - 405 39936861 - RPA3800 - VWA domain CoxE-like family protein 3781 66.33 0 4298538..4299440 - 300 39936862 - RPA3801 - ATPase 3782 66.42 0 4299460..4300266 - 268 39936863 - RPA3802 - carbon monoxide dehydrogenase medium subunit 3783 64.20 0 4300342..4300827 - 161 39936864 - RPA3803 - carbon-monoxide dehydrogenase small subunit 3784 63.23 0 4301003..4301467 - 154 39936865 - RPA3804 - hypothetical protein 3785 64.20 0 4301663..4302190 - 175 39936866 - RPA3805 - hypothetical protein 3786 63.18 0 4303024..4303941 + 305 39936867 livH RPA3806 - inner-membrane translocator 3787 66.29 0 4303954..4305285 + 443 39936868 livM RPA3807 - inner-membrane translocator 3788 66.31 0 4305282..4306118 + 278 39936869 livG RPA3808 - branched chain amino acid ABC transporter ATP-binding protein 3789 67.61 0 4306255..4306995 + 246 39936870 livF RPA3809 - branched chain amino acid ABC transporter ATP-binding protein 3790 63.23 0 4307174..4308280 + 368 39936871 livK RPA3810 - extracellular ligand-binding receptor 3791 56.60 -2 4308492..4308779 - 95 39936872 - RPA3811 - excinuclease ABC subunit C 3792 65.71 0 4309058..4309792 - 244 39936873 - RPA3812 - cytochrome c biogenesis protein, transmembrane region 3793 69.05 +1 4309894..4310943 + 349 39936874 - RPA3813 - T4 family peptidase 3794 64.98 0 4311084..4311854 - 256 39936875 - RPA3814 - calcium-binding EF-hand 3795 65.81 0 4312124..4312822 + 232 39936876 cbbE RPA3815 - ribulose-phosphate 3-epimerase 3796 62.86 0 4312829..4313380 - 183 39936877 - RPA3816 - hypothetical protein 3797 66.21 0 4313465..4314772 + 435 39936878 purB RPA3817 - adenylosuccinate lyase 3798 66.52 0 4315019..4315720 - 233 39936879 purL RPA3818 - phosphoribosylformylglycinamidine synthase I 3799 52.92 -2 4315777..4316016 - 79 39936880 - RPA3819 - hypothetical protein 3800 65.04 0 4316040..4316285 - 81 39936881 - RPA3820 - phosphoribosylformylglycinamidine synthase subunit PurS 3801 61.85 -1 4316467..4317234 - 255 39936882 purC2 RPA3821 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3802 64.81 0 4317533..4317856 + 107 39936883 - RPA3822 - hypothetical protein 3803 68.15 0 4318428..4319102 + 224 39936884 - RPA3823 - hypothetical protein 3804 65.24 0 4319994..4320344 - 116 39936885 - RPA3824 - hypothetical protein 3805 69.49 +1 4320433..4321281 - 282 39936886 - RPA3825 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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