version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3531 65.82 0 4018092..4019861 + 589 39936612 - RPA3550 - coenzyme B12-binding:Elongator protein 3/MiaB/NifB 3532 70.56 +1 4019858..4020577 + 239 39936613 - RPA3551 - short chain dehydrogenase 3533 71.67 +2 4020574..4021392 + 272 39936614 - RPA3552 - putative short-chain dehydrogenase/reductase 3534 65.95 0 4021413..4022534 - 373 39936615 - RPA3553 - bile acid:sodium symporter 3535 67.84 0 4022698..4023123 - 141 39936616 arsC2 RPA3554 - arsenate reductase 3536 67.61 0 4023123..4023650 - 175 39936617 arsC3 RPA3555 - arsenate reductase 3537 66.67 0 4023643..4023999 - 118 39936618 arsR2 RPA3556 - ArsR family transcriptional regulator ArsR2 3538 66.67 0 4024054..4024290 - 78 39936619 - RPA3557 - Thiol-disulfide isomerase and thioredoxins 3539 68.76 +1 4024302..4025351 - 349 39936620 - RPA3558 - permease 3540 68.67 +1 4025348..4025647 - 99 39936621 arsR3 RPA3559 - ArsR family transcriptional regulator ArsR3 3541 64.89 0 4025789..4026574 + 261 39936622 - RPA3560 - hypothetical protein 3542 67.51 0 4026812..4027168 + 118 39936623 - RPA3561 - ArsR family transcriptional regulator 3543 69.25 +1 4027158..4028009 + 283 39936624 arsM RPA3562 - arsenite S-adenosylmethyltransferase 3544 57.89 -2 4028667..4029065 - 132 39936625 - RPA3563 - hypothetical protein 3545 64.25 0 4029316..4030764 - 482 39936626 tnaA RPA3564 - tryptophanase 3546 68.75 +1 4031035..4031754 + 239 39936627 - RPA3565 - ErfK/YbiS/YcfS/YnhG 3547 69.62 +1 4031944..4032282 + 112 39936628 - RPA3566 - hypothetical protein 3548 67.56 0 4032439..4034001 + 520 39936629 - RPA3567 - hypothetical protein 3549 63.33 0 4034096..4034635 - 179 39936630 - RPA3568 - hypothetical protein 3550 62.80 0 4034923..4035465 - 180 39936631 - RPA3569 - hypothetical protein 3551 68.74 +1 4035633..4036355 + 240 39936632 - RPA3570 - two-component transcriptional regulator 3552 69.59 +1 4036352..4037686 + 444 39936633 - RPA3571 - two component sensor histidine kinase 3553 69.58 +1 4037705..4039423 - 572 39936634 - RPA3572 - hypothetical protein 3554 68.71 +1 4039635..4040612 + 325 39936635 thiO RPA3573 - glycine oxidase ThiO 3555 67.17 0 4040603..4040800 + 65 39936636 thiS RPA3574 - thiamine biosynthesis protein ThiS 3556 67.31 0 4041053..4041835 + 260 39936637 thiG RPA3575 - thiazole synthase 3557 67.65 0 4041822..4042430 + 202 39936638 thiE RPA3576 - thiamine-phosphate pyrophosphorylase 3558 64.77 0 4042665..4044665 + 666 39936639 thiC RPA3577 - thiamine biosynthesis protein ThiC 3559 48.97 -2 4044836..4045711 + 291 39936640 - RPA3578 - hypothetical protein 3560 58.05 -2 4045969..4046235 + 88 39936641 - RPA3579 - hypothetical protein 3561 63.74 0 4046232..4047152 + 306 39936642 - RPA3580 - integrase catalytic subunit 3562 61.67 -1 4047139..4047318 - 59 39936643 - RPA3581 - putative 8.8 KD protein Y4HR 3563 64.78 0 4047439..4047969 - 176 39936644 - RPA3582 - hypothetical protein 3564 66.37 0 4047957..4048295 - 112 39936645 - RPA3583 - hypothetical protein 3565 64.23 0 4048474..4049253 + 259 39936646 - RPA3584 - hypothetical protein 3566 70.96 +1 4049441..4049953 - 170 39936647 - RPA3585 - hypothetical protein 3567 66.45 0 4050261..4050725 - 154 39936648 - RPA3586 - hypothetical protein 3568 62.11 0 4051923..4052207 + 94 39936649 - RPA3587 - hypothetical protein 3569 68.68 +1 4052583..4053875 - 430 39936650 - RPA3588 - hypothetical protein 3570 72.25 +2 4054172..4054726 + 184 39936651 - RPA3589 - hypothetical protein 3571 69.46 +1 4054719..4055147 - 142 39936652 - RPA3590 - hypothetical protein 3572 68.49 +1 4055350..4055733 + 127 39936653 - RPA3591 - endoribonuclease L-PSP 3573 66.30 0 4055953..4057032 + 359 39936654 - RPA3592 - hypothetical protein 3574 71.67 +2 4057138..4057776 + 212 39936655 - RPA3593 - triple helix repeat-containing collagen 3575 66.67 0 4057819..4058085 - 88 39936656 - RPA3594 - hypothetical protein 3576 67.46 0 4058240..4058869 + 209 39936657 - RPA3595 - hypothetical protein 3577 66.83 0 4058884..4060089 - 401 39936658 - RPA3596 - hypothetical protein 3578 65.88 0 4060076..4061734 - 552 39936659 - RPA3597 - hypothetical protein 3579 66.50 0 4061895..4063706 + 603 39936660 - RPA3598 - methyl-accepting chemotaxis receptor/sensory transducer 3580 64.64 0 4063844..4064386 + 180 39936661 - RPA3599 - hypothetical protein 3581 59.01 -1 4064442..4064924 - 160 39936662 bfr RPA3600 - bacterioferritin 3582 70.00 +1 4065648..4066007 + 119 39936663 - RPA3601 - hypothetical protein 3583 72.28 +2 4066228..4066512 + 94 39936664 - RPA3602 - hypothetical protein 3584 65.01 0 4066589..4068463 - 624 39936665 - RPA3603 - lytic murein transglycosylase 3585 62.10 0 4067833..4068423 - 196 39936666 - RPA3604 - hypothetical protein 3586 65.63 0 4068598..4069368 - 256 39936667 - RPA3605 - trans-aconitate 2-methyltransferase 3587 58.42 -2 4069410..4069688 + 92 39936668 - RPA3606 - hypothetical protein 3588 59.22 -1 4069978..4070232 + 84 39936669 - RPA3607 - AbrB/SpoVT family transcriptional regulator 3589 60.20 -1 4070229..4070630 + 133 39936670 - RPA3608 - PilT protein, N-terminal 3590 63.39 0 4070637..4072286 - 549 39936671 - RPA3609 - putative ABC transporter ATP-binding protein 3591 65.17 0 4072527..4072727 + 66 39936672 - RPA3610 - hypothetical protein 3592 70.62 +1 4072807..4073691 - 294 39936673 - RPA3611 - ErfK/YbiS/YcfS/YnhG 3593 73.53 +2 4074440..4075474 + 344 39936674 - RPA3612 - hypothetical protein 3594 68.76 +1 4075487..4076347 - 286 39936675 - RPA3613 - putative thiosulfate sulfurtransferase 3595 63.55 0 4076464..4076880 - 138 39936676 - RPA3614 - rhodanese-like protein 3596 61.31 -1 4077026..4078201 - 391 39936677 - RPA3615 - hypothetical protein 3597 65.12 0 4078368..4080302 + 644 39936678 - RPA3616 - diguanylate cyclase 3598 63.92 0 4080472..4080726 + 84 39936679 - RPA3617 - hypothetical protein 3599 62.04 -1 4080841..4081683 + 280 39936680 - RPA3618 - ATPase 3600 65.71 0 4082101..4083144 + 347 39936681 vanA RPA3619 - putative vanillate O-demethylase oxygenase, iron-sulfur subunit 3601 68.12 0 4083148..4083903 + 251 39936682 vanR RPA3620 - GntR family transcriptional regulator 3602 67.67 0 4083934..4084926 + 330 39936683 vanB RPA3621 - putative vanillate O-demethylase oxidoreductase 3603 65.26 0 4085029..4085313 - 94 39936684 - RPA3622 - hypothetical protein 3604 62.81 0 4085453..4086049 - 198 39936685 - RPA3623 - GCN5-related N-acetyltransferase 3605 66.45 0 4086198..4087127 - 309 39936686 - RPA3624 - gluconolactonase precursor 3606 68.24 0 4087553..4088125 + 190 39936687 - RPA3625 - excinuclease ABC subunit C 3607 62.35 0 4088910..4089164 - 84 39936688 - RPA3626 - hypothetical protein 3608 59.12 -1 4089161..4089637 - 158 39936689 - RPA3627 - putative glutathione peroxidase 3609 69.67 +1 4089656..4091053 - 465 39936690 - RPA3628 - amidase 3610 63.18 0 4091125..4091382 - 85 39936691 - RPA3629 - hypothetical protein 3611 68.48 +1 4091519..4092508 + 329 39936692 - RPA3630 - proline iminopeptidase 3612 68.86 +1 4092518..4093291 - 257 39936693 - RPA3631 - putative glucose dehydrogenase 3613 66.25 0 4093389..4093871 + 160 39936694 - RPA3632 - MarR family transcriptional regulator 3614 65.48 0 4093891..4094565 + 224 39936695 - RPA3633 - hypothetical protein 3615 65.71 0 4094709..4097633 + 974 39936696 tal RPA3634 - bifunctional transaldolase/phosoglucose isomerase 3616 65.80 0 4097820..4098860 + 346 39936697 gnd RPA3635 - 6-phosphogluconate dehydrogenase-like protein 3617 64.29 0 4098857..4100371 + 504 39936698 zwf RPA3636 - glucose-6-phosphate 1-dehydrogenase 3618 68.56 +1 4100374..4101111 + 245 39936699 pgl RPA3637 - 6-phosphogluconolactonase 3619 68.26 0 4101080..4101643 + 187 39936700 - RPA3638 - carbohydrate kinase, thermoresistant glucokinase 3620 66.06 0 4101767..4102585 + 272 39936701 cof RPA3639 - Cof-like hydrolase 3621 66.50 0 4102582..4104390 - 602 39936702 - RPA3640 - glycoside hydrolase family protein 3622 66.56 0 4104395..4106347 - 650 39936703 malQ RPA3641 - 4-alpha-glucanotransferase 3623 62.41 0 4106445..4108511 + 688 39936704 - RPA3642 - alpha amylase, catalytic region 3624 64.67 0 4108522..4111824 + 1100 39936705 - RPA3643 - putative trehalose synthase 3625 64.16 0 4111821..4113971 + 716 39936706 glgB RPA3644 - glycogen branching enzyme 3626 64.79 0 4114210..4116291 + 693 39936707 glgX RPA3645 - glycogen debranching protein GlgX 3627 66.16 0 4116288..4118054 + 588 39936708 - RPA3646 - putative maltooligosyltrehalose trehalohydrolase 3628 66.52 0 4118054..4120840 + 928 39936709 - RPA3647 - malto-oligosyltrehalose synthase 3629 63.11 0 4121257..4121565 - 102 39936710 - RPA3648 - hypothetical protein 3630 60.61 -1 4121610..4121906 + 98 39936711 - RPA3649 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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