version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3480 65.92 0 3949002..3949538 + 178 39936561 - RPA3499 - hypothetical protein 3481 65.55 0 3949644..3951077 + 477 39936562 fumC RPA3500 - fumarate hydratase 3482 59.86 -1 3951527..3951805 + 92 39936563 - RPA3501 - hypothetical protein 3483 71.15 +1 3951826..3955641 - 1271 39936564 - RPA3502 - hypothetical protein 3484 67.01 0 3955777..3957240 - 487 39936565 - RPA3503 - putative D-lactate dehydrogenase, oxidoreductase 3485 61.88 -1 3957325..3957804 + 159 39936566 - RPA3504 - thioesterase superfamily protein 3486 56.32 -2 3957801..3957974 - 57 39936567 - RPA3505 - hypothetical protein 3487 66.94 0 3958287..3960833 + 848 39936568 uvrD RPA3506 - UvrD/REP helicase 3488 60.70 -1 3960833..3961117 + 94 39936569 - RPA3507 - hypothetical protein 3489 65.04 0 3961413..3962333 + 306 39936570 - RPA3508 - ATP-binding component of ABC transporter 3490 61.68 -1 3962336..3963097 + 253 39936571 - RPA3509 - hypothetical protein 3491 68.68 +1 3963169..3963516 - 115 39936572 - RPA3510 - hypothetical protein 3492 65.63 0 3963779..3964549 + 256 39936573 - RPA3511 - ErfK/YbiS/YcfS/YnhG 3493 68.43 +1 3964611..3966761 - 716 39936574 - RPA3512 - hypothetical protein 3494 68.42 +1 3966889..3968661 + 590 39936575 - RPA3513 - FAD dependent oxidoreductase 3495 71.26 +1 3969431..3970366 + 311 39936576 - RPA3514 - ribosomal L11 methyltransferase 3496 68.47 +1 3970781..3972610 + 609 39936577 - RPA3515 - peptidase M24 3497 67.75 0 3972983..3974269 + 428 39936578 - RPA3516 - MFS family efflux pump 3498 66.09 0 3974463..3976541 - 692 39936579 dnlJ RPA3517 - DNA ligase 3499 58.33 -2 3976757..3977044 + 95 39936580 - RPA3518 - excinuclease ABC subunit C 3500 71.65 +2 3977199..3978884 - 561 39936581 recN RPA3519 - DNA repair protein RecN 3501 62.49 0 3978897..3979805 - 302 39936582 - RPA3520 - putative lipoprotein 3502 66.67 0 3980032..3981087 - 351 39936583 lpxC RPA3521 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3503 68.92 +1 3981341..3983119 - 592 39936584 ftsZ RPA3522 - cell division protein FtsZ 3504 67.88 0 3983213..3984535 - 440 39936585 ftsA RPA3523 - cell division protein FtsA 3505 66.87 0 3984532..3985521 - 329 39936586 ftsQ RPA3524 - putative cell division protein FtsQ 3506 68.79 +1 3985840..3986829 - 329 39936587 ddlA RPA3525 - putative D-alanyl-D-alanine ligase A 3507 68.10 0 3986939..3988267 - 442 39936588 - RPA3526 - hypothetical protein 3508 64.07 0 3988434..3989318 + 294 39936589 - RPA3527 - hypothetical protein 3509 67.79 0 3989368..3990342 - 324 39936590 murB RPA3528 - UDP-N-acetylenolpyruvoylglucosamine reductase 3510 66.38 0 3990383..3991786 - 467 39936591 murC RPA3529 - UDP-N-acetylmuramate--L-alanine ligase 3511 71.03 +1 3991923..3993023 - 366 39936592 murG RPA3530 - N-acetylglucosaminyl transferase 3512 66.32 0 3993028..3994170 - 380 39936593 ftsW RPA3531 - putative cell division protein ftsW 3513 69.15 +1 3994412..3995821 - 469 39936594 murD RPA3532 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3514 64.46 0 3996009..3997094 - 361 39936595 mraY RPA3533 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3515 68.82 +1 3997105..3998544 - 479 39936596 murF RPA3534 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alany l-D-alanyl ligase 3516 69.89 +1 3998541..3999998 - 485 39936597 murE RPA3535 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 3517 65.13 0 4000111..4001865 - 584 39936598 - RPA3536 - peptidoglycan glycosyltransferase 3518 68.75 +1 4001862..4002245 - 127 39936599 - RPA3537 - hypothetical protein 3519 69.77 +1 4002242..4003240 - 332 39936600 - RPA3538 - methyltransferase 3520 68.19 0 4003820..4004605 + 261 39936601 - RPA3539 - peptidoglycan binding domain-containing protein 3521 58.77 -2 4005202..4005771 - 189 39936602 - RPA3540 - putative cell filamentation protein 3522 58.71 -2 4005773..4005973 - 66 39936603 - RPA3541 - hypothetical protein 3523 64.16 0 4006022..4007614 - 530 39936604 emrB1 RPA3542 - drug resistance transporter EmrB/QacA subfamily 3524 69.42 +1 4007765..4009033 - 422 39936605 - RPA3543 - multidrug resistance efflux pump 3525 65.90 0 4009215..4009865 + 216 39936606 - RPA3544 - TetR family transcriptional regulator 3526 67.81 0 4009877..4011184 - 435 39936607 - RPA3545 - hypothetical protein 3527 67.84 0 4011242..4013197 - 651 39936608 - RPA3546 - methyl-accepting chemotaxis receptor/sensory transducer 3528 60.64 -1 4013379..4013627 - 82 39936609 - RPA3547 - hypothetical protein 3529 66.17 0 4013663..4016911 - 1082 39936610 - RPA3548 - serine protease/outer membrane autotransporter 3530 63.07 0 4017089..4017727 + 212 39936611 - RPA3549 - hydrolase 3531 65.82 0 4018092..4019861 + 589 39936612 - RPA3550 - coenzyme B12-binding:Elongator protein 3/MiaB/NifB 3532 70.56 +1 4019858..4020577 + 239 39936613 - RPA3551 - short chain dehydrogenase 3533 71.67 +2 4020574..4021392 + 272 39936614 - RPA3552 - putative short-chain dehydrogenase/reductase 3534 65.95 0 4021413..4022534 - 373 39936615 - RPA3553 - bile acid:sodium symporter 3535 67.84 0 4022698..4023123 - 141 39936616 arsC2 RPA3554 - arsenate reductase 3536 67.61 0 4023123..4023650 - 175 39936617 arsC3 RPA3555 - arsenate reductase 3537 66.67 0 4023643..4023999 - 118 39936618 arsR2 RPA3556 - ArsR family transcriptional regulator ArsR2 3538 66.67 0 4024054..4024290 - 78 39936619 - RPA3557 - Thiol-disulfide isomerase and thioredoxins 3539 68.76 +1 4024302..4025351 - 349 39936620 - RPA3558 - permease 3540 68.67 +1 4025348..4025647 - 99 39936621 arsR3 RPA3559 - ArsR family transcriptional regulator ArsR3 3541 64.89 0 4025789..4026574 + 261 39936622 - RPA3560 - hypothetical protein 3542 67.51 0 4026812..4027168 + 118 39936623 - RPA3561 - ArsR family transcriptional regulator 3543 69.25 +1 4027158..4028009 + 283 39936624 arsM RPA3562 - arsenite S-adenosylmethyltransferase 3544 57.89 -2 4028667..4029065 - 132 39936625 - RPA3563 - hypothetical protein 3545 64.25 0 4029316..4030764 - 482 39936626 tnaA RPA3564 - tryptophanase 3546 68.75 +1 4031035..4031754 + 239 39936627 - RPA3565 - ErfK/YbiS/YcfS/YnhG 3547 69.62 +1 4031944..4032282 + 112 39936628 - RPA3566 - hypothetical protein 3548 67.56 0 4032439..4034001 + 520 39936629 - RPA3567 - hypothetical protein 3549 63.33 0 4034096..4034635 - 179 39936630 - RPA3568 - hypothetical protein 3550 62.80 0 4034923..4035465 - 180 39936631 - RPA3569 - hypothetical protein 3551 68.74 +1 4035633..4036355 + 240 39936632 - RPA3570 - two-component transcriptional regulator 3552 69.59 +1 4036352..4037686 + 444 39936633 - RPA3571 - two component sensor histidine kinase 3553 69.58 +1 4037705..4039423 - 572 39936634 - RPA3572 - hypothetical protein 3554 68.71 +1 4039635..4040612 + 325 39936635 thiO RPA3573 - glycine oxidase ThiO 3555 67.17 0 4040603..4040800 + 65 39936636 thiS RPA3574 - thiamine biosynthesis protein ThiS 3556 67.31 0 4041053..4041835 + 260 39936637 thiG RPA3575 - thiazole synthase 3557 67.65 0 4041822..4042430 + 202 39936638 thiE RPA3576 - thiamine-phosphate pyrophosphorylase 3558 64.77 0 4042665..4044665 + 666 39936639 thiC RPA3577 - thiamine biosynthesis protein ThiC 3559 48.97 -2 4044836..4045711 + 291 39936640 - RPA3578 - hypothetical protein 3560 58.05 -2 4045969..4046235 + 88 39936641 - RPA3579 - hypothetical protein 3561 63.74 0 4046232..4047152 + 306 39936642 - RPA3580 - integrase catalytic subunit 3562 61.67 -1 4047139..4047318 - 59 39936643 - RPA3581 - putative 8.8 KD protein Y4HR 3563 64.78 0 4047439..4047969 - 176 39936644 - RPA3582 - hypothetical protein 3564 66.37 0 4047957..4048295 - 112 39936645 - RPA3583 - hypothetical protein 3565 64.23 0 4048474..4049253 + 259 39936646 - RPA3584 - hypothetical protein 3566 70.96 +1 4049441..4049953 - 170 39936647 - RPA3585 - hypothetical protein 3567 66.45 0 4050261..4050725 - 154 39936648 - RPA3586 - hypothetical protein 3568 62.11 0 4051923..4052207 + 94 39936649 - RPA3587 - hypothetical protein 3569 68.68 +1 4052583..4053875 - 430 39936650 - RPA3588 - hypothetical protein 3570 72.25 +2 4054172..4054726 + 184 39936651 - RPA3589 - hypothetical protein 3571 69.46 +1 4054719..4055147 - 142 39936652 - RPA3590 - hypothetical protein 3572 68.49 +1 4055350..4055733 + 127 39936653 - RPA3591 - endoribonuclease L-PSP 3573 66.30 0 4055953..4057032 + 359 39936654 - RPA3592 - hypothetical protein 3574 71.67 +2 4057138..4057776 + 212 39936655 - RPA3593 - triple helix repeat-containing collagen 3575 66.67 0 4057819..4058085 - 88 39936656 - RPA3594 - hypothetical protein 3576 67.46 0 4058240..4058869 + 209 39936657 - RPA3595 - hypothetical protein 3577 66.83 0 4058884..4060089 - 401 39936658 - RPA3596 - hypothetical protein 3578 65.88 0 4060076..4061734 - 552 39936659 - RPA3597 - hypothetical protein 3579 66.50 0 4061895..4063706 + 603 39936660 - RPA3598 - methyl-accepting chemotaxis receptor/sensory transducer 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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