version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3412 64.95 0 3871208..3871963 - 251 39936493 - RPA3430 - alpha/beta hydrolase fold 3413 66.32 0 3872133..3873281 - 382 39936494 - RPA3431 - hypothetical protein 3414 60.57 -1 3873487..3873732 + 81 39936495 - RPA3432 - hypothetical protein 3415 71.94 +2 3873751..3874944 + 397 39936496 - RPA3433 - salicylate 1-monooxygenase 3416 63.57 0 3875337..3875981 + 214 39936497 - RPA3434 - universal stress protein 3417 66.67 0 3876078..3876938 + 286 39936498 - RPA3435 - glycosyl transferase family protein 3418 64.71 0 3876964..3877473 + 169 39936499 - RPA3436 - GCN5-related N-acetyltransferase 3419 56.43 -2 3878064..3879167 + 367 39936500 - RPA3437 - hypothetical protein 3420 58.33 -2 3879239..3879502 - 87 39936501 - RPA3438 - hypothetical protein 3421 67.68 0 3880205..3881392 + 395 39936502 - RPA3439 - putative hydrolase 3422 68.93 +1 3881385..3882800 + 471 39936503 - RPA3440 - amidase 3423 65.48 0 3882893..3883822 + 309 39936504 - RPA3441 - enoyl-CoA hydratase 3424 64.86 0 3883848..3884624 - 258 39936505 - RPA3442 - putative cyclase 3425 64.34 0 3884651..3885640 - 329 39936506 - RPA3443 - isomerase/decarboxylase 3426 68.07 0 3885768..3886478 + 236 39936507 - RPA3444 - GntR family transcriptional regulator 3427 66.96 0 3886503..3888224 - 573 39936508 - RPA3445 - AMP-dependent synthetase and ligase 3428 67.34 0 3888385..3889272 - 295 39936509 - RPA3446 - 3-hydroxyisobutyrate dehydrogenase 3429 65.74 0 3889306..3890379 - 357 39936510 - RPA3447 - enoyl-CoA hydratase 3430 65.63 0 3890376..3891533 - 385 39936511 - RPA3448 - acyl-CoA dehydrogenase 3431 59.76 -1 3891530..3891949 - 139 39936512 - RPA3449 - PilT protein, N-terminal 3432 65.46 0 3892228..3893724 - 498 39936513 - RPA3450 - methylmalonate-semialdehyde dehydrogenase 3433 68.01 0 3893884..3894552 - 222 39936514 - RPA3451 - TetR family transcriptional regulator 3434 69.62 +1 3894626..3895201 - 191 39936515 - RPA3452 - phenylacetic acid degradation-related protein 3435 66.28 0 3895343..3896113 + 256 39936516 - RPA3453 - enoyl-CoA hydratase 3436 70.09 +1 3896238..3897524 + 428 39936517 - RPA3454 - MFS family transporter 3437 67.12 0 3897573..3899132 - 519 39936518 - RPA3455 - methylmalonyl-CoA decarboxylase alpha chain 3438 62.61 0 3900286..3900507 + 73 39936519 - RPA3457 - biotin/lipoyl attachment protein 3439 66.24 0 3900691..3901851 + 386 39936520 - RPA3458 - TRAP dicarboxylate family transporter DctP subunit 3440 66.47 0 3901879..3903945 + 688 39936521 - RPA3459 - TRAP dicarboxylate family transporter DctM/Q subunit 3441 65.05 0 3904066..3904620 + 184 39936522 - RPA3460 - hypothetical protein 3442 66.12 0 3904676..3905041 - 121 39936523 - RPA3461 - hypothetical protein 3443 67.57 0 3905038..3906252 - 404 39936524 - RPA3462 - thiolase 3444 67.16 0 3906356..3907573 - 405 39936525 - RPA3463 - hypothetical protein 3445 67.57 0 3907766..3908650 + 294 39936526 - RPA3464 - hypothetical protein 3446 66.60 0 3908870..3910396 - 508 39936527 - RPA3465 - putative long-chain-fatty-acid CoA ligase 3447 66.15 0 3910417..3911586 - 389 39936528 - RPA3466 - acetyl-CoA acetyltransferase 3448 67.04 0 3911835..3912899 - 354 39936529 - RPA3467 - NAD-dependent epimerase/dehydratase 3449 62.14 0 3913033..3913959 - 308 39936530 - RPA3468 - putative permease protein of sugar ABC transporter 3450 63.31 0 3913952..3914905 - 317 39936531 - RPA3469 - binding-protein-dependent transport systems inner membrane component 3451 63.35 0 3915123..3916448 - 441 39936532 - RPA3470 - putative sugar uptake ABC transporter periplasmic solute-binding protein precursor 3452 64.60 0 3916525..3917589 - 354 39936533 - RPA3471 - ABC transporter ATP-binding protein 3453 65.78 0 3917826..3919634 + 602 39936534 ilvD1 RPA3472 - dihydroxy-acid dehydratase 3454 68.16 0 3919768..3920502 + 244 39936535 ucpA RPA3473 - short-chain dehydrogenase/reductase SDR 3455 66.53 0 3920586..3921335 + 249 39936536 fabG4 RPA3474 - short-chain dehydrogenase/reductase SDR 3456 66.77 0 3921408..3922367 - 319 39936537 - RPA3475 - putative transposase 3457 68.30 0 3922797..3923591 - 264 39936538 - RPA3476 - energy transducer TonB 3458 63.33 0 3923696..3924145 - 149 39936539 exbD5 RPA3477 - exbD, uptake of enterochelin; tonB-dependent uptake of B colicins 3459 66.95 0 3924149..3924853 - 234 39936540 exbB5 RPA3478 - exbB, uptake of enterochelin; tonB-dependent uptake of B colicins 3460 63.04 0 3925057..3925746 - 229 39936541 - RPA3479 - putative hydroxylase 3461 64.44 0 3925772..3927973 - 733 39936542 fiu RPA3480 - putative outer membrane receptor for iron transport 3462 63.79 0 3928437..3928679 - 80 39936543 - RPA3481 - hypothetical protein 3463 67.24 0 3929016..3930239 + 407 39936544 - RPA3482 - hypothetical protein 3464 65.97 0 3930242..3933379 + 1045 39936545 - RPA3483 - RND efflux transporter 3465 62.46 0 3933422..3934063 - 213 39936546 - RPA3484 - PilT protein, N-terminal 3466 68.51 +1 3934674..3935867 - 397 39936547 - RPA3485 - putative racemase 3467 62.62 0 3935977..3937188 - 403 39936548 - RPA3486 - putative branched-chain amino acid transport system substrate-binding protein 3468 71.38 +1 3937437..3938051 - 204 39936549 - RPA3487 - hypothetical protein 3469 67.07 0 3938057..3939562 - 501 39936550 - RPA3488 - peptidase S1C, Do 3470 63.18 0 3939777..3939977 - 66 39936551 - RPA3489 - hypothetical protein 3471 66.99 0 3940220..3941146 - 308 39936552 hflC RPA3490 - HflC protein 3472 65.80 0 3941143..3942294 - 383 39936553 hflK RPA3491 - HflK protein 3473 65.38 0 3942439..3942981 - 180 39936554 dyr RPA3492 - dihydrofolate reductase 3474 62.39 0 3942978..3943772 - 264 39936555 thyA RPA3493 - thymidylate synthase 3475 66.37 0 3943944..3944951 - 335 39936556 - RPA3494 - TctC subunit of the tripartite tricarboxylate transport(TTT) family 3476 65.94 0 3945053..3946567 - 504 39936557 - RPA3495 - hypothetical protein 3477 69.86 +1 3946578..3947078 - 166 39936558 - RPA3496 - TctB subunit of the tripartite tricarboxylate transport(TTT) family 3478 70.06 +1 3947151..3947681 - 176 39936559 - RPA3497 - chromate transporter 3479 68.68 +1 3947678..3948274 - 198 39936560 - RPA3498 - chromate transporter 3480 65.92 0 3949002..3949538 + 178 39936561 - RPA3499 - hypothetical protein 3481 65.55 0 3949644..3951077 + 477 39936562 fumC RPA3500 - fumarate hydratase 3482 59.86 -1 3951527..3951805 + 92 39936563 - RPA3501 - hypothetical protein 3483 71.15 +1 3951826..3955641 - 1271 39936564 - RPA3502 - hypothetical protein 3484 67.01 0 3955777..3957240 - 487 39936565 - RPA3503 - putative D-lactate dehydrogenase, oxidoreductase 3485 61.88 -1 3957325..3957804 + 159 39936566 - RPA3504 - thioesterase superfamily protein 3486 56.32 -2 3957801..3957974 - 57 39936567 - RPA3505 - hypothetical protein 3487 66.94 0 3958287..3960833 + 848 39936568 uvrD RPA3506 - UvrD/REP helicase 3488 60.70 -1 3960833..3961117 + 94 39936569 - RPA3507 - hypothetical protein 3489 65.04 0 3961413..3962333 + 306 39936570 - RPA3508 - ATP-binding component of ABC transporter 3490 61.68 -1 3962336..3963097 + 253 39936571 - RPA3509 - hypothetical protein 3491 68.68 +1 3963169..3963516 - 115 39936572 - RPA3510 - hypothetical protein 3492 65.63 0 3963779..3964549 + 256 39936573 - RPA3511 - ErfK/YbiS/YcfS/YnhG 3493 68.43 +1 3964611..3966761 - 716 39936574 - RPA3512 - hypothetical protein 3494 68.42 +1 3966889..3968661 + 590 39936575 - RPA3513 - FAD dependent oxidoreductase 3495 71.26 +1 3969431..3970366 + 311 39936576 - RPA3514 - ribosomal L11 methyltransferase 3496 68.47 +1 3970781..3972610 + 609 39936577 - RPA3515 - peptidase M24 3497 67.75 0 3972983..3974269 + 428 39936578 - RPA3516 - MFS family efflux pump 3498 66.09 0 3974463..3976541 - 692 39936579 dnlJ RPA3517 - DNA ligase 3499 58.33 -2 3976757..3977044 + 95 39936580 - RPA3518 - excinuclease ABC subunit C 3500 71.65 +2 3977199..3978884 - 561 39936581 recN RPA3519 - DNA repair protein RecN 3501 62.49 0 3978897..3979805 - 302 39936582 - RPA3520 - putative lipoprotein 3502 66.67 0 3980032..3981087 - 351 39936583 lpxC RPA3521 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3503 68.92 +1 3981341..3983119 - 592 39936584 ftsZ RPA3522 - cell division protein FtsZ 3504 67.88 0 3983213..3984535 - 440 39936585 ftsA RPA3523 - cell division protein FtsA 3505 66.87 0 3984532..3985521 - 329 39936586 ftsQ RPA3524 - putative cell division protein FtsQ 3506 68.79 +1 3985840..3986829 - 329 39936587 ddlA RPA3525 - putative D-alanyl-D-alanine ligase A 3507 68.10 0 3986939..3988267 - 442 39936588 - RPA3526 - hypothetical protein 3508 64.07 0 3988434..3989318 + 294 39936589 - RPA3527 - hypothetical protein 3509 67.79 0 3989368..3990342 - 324 39936590 murB RPA3528 - UDP-N-acetylenolpyruvoylglucosamine reductase 3510 66.38 0 3990383..3991786 - 467 39936591 murC RPA3529 - UDP-N-acetylmuramate--L-alanine ligase 3511 71.03 +1 3991923..3993023 - 366 39936592 murG RPA3530 - N-acetylglucosaminyl transferase 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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