version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3359 69.22 +1 3819486..3820190 - 234 39936440 - RPA3377 - 3-oxoacyl-acyl carrier protein reductase 3360 63.84 0 3820668..3820844 - 58 39936441 - RPA3378 - hypothetical protein 3361 64.62 0 3821212..3821406 - 64 39936442 - RPA3379 - hypothetical protein 3362 64.29 0 3821616..3822161 + 181 39936443 - RPA3380 - response regulator receiver (CheY-like protein) 3363 71.24 +1 3822179..3822769 + 196 39936444 - RPA3381 - Hpt domain-containing protein 3364 71.28 +1 3823066..3824235 - 389 39936445 - RPA3382 - hypothetical protein 3365 63.61 0 3824681..3825466 + 261 39936446 - RPA3383 - taurine transport system permease protein 3366 63.76 0 3825463..3826494 + 343 39936447 - RPA3384 - nitrate/sulfonate/bicarbonate ABC transporter periplasmic-binding protein 3367 62.84 0 3826491..3827327 + 278 39936448 nrtC2 RPA3385 - putative nitrate transport system ATP-binding protein 3368 65.11 0 3827388..3829061 + 557 39936449 - RPA3386 - amidohydrolase 3369 63.82 0 3829071..3830087 + 338 39936450 - RPA3387 - LysR family transcriptional regulator 3370 67.63 0 3830094..3831134 - 346 39936451 - RPA3388 - hypothetical protein 3371 63.66 0 3831331..3832029 + 232 39936452 - RPA3389 - hypothetical protein 3372 66.23 0 3832039..3832494 - 151 39936453 hisI RPA3390 - phosphoribosyl-AMP cyclohydrolase 3373 66.38 0 3832523..3833212 - 229 39936454 gch1 RPA3391 - GTP cyclohydrolase I 3374 65.12 0 3833480..3833932 + 150 39936455 - RPA3392 - nifU-like protein 3375 69.92 +1 3834115..3835005 - 296 39936456 - RPA3393 - hypothetical protein 3376 67.10 0 3835177..3835635 + 152 39936457 - RPA3394 - hypothetical protein 3377 68.31 0 3835622..3836413 - 263 39936458 - RPA3395 - hypothetical protein 3378 65.43 0 3836526..3837653 - 375 39936459 - RPA3396 - hypothetical protein 3379 56.43 -2 3837655..3838113 - 152 39936460 - RPA3397 - hypothetical protein 3380 68.09 0 3838266..3839531 - 421 39936461 - RPA3398 - arsenite permease 3381 59.21 -1 3839779..3840006 + 75 39936462 cspA4 RPA3399 - cold shock DNA binding protein 3382 66.67 0 3840107..3840355 + 82 39936463 - RPA3400 - hypothetical protein 3383 63.64 0 3840399..3840596 + 65 39936464 - RPA3401 - hypothetical protein 3384 65.96 0 3840586..3841008 - 140 39936465 - RPA3402 - hypothetical protein 3385 67.61 0 3841013..3841645 - 210 39936466 - RPA3403 - TetR family transcriptional regulator 3386 67.13 0 3841743..3842393 + 216 39936467 - RPA3404 - putative O-methyltransferase 3387 69.62 +1 3842755..3843873 - 372 39936468 - RPA3405 - transporter 3388 64.80 0 3844183..3846159 + 658 39936469 thrS RPA3406 - threonyl-tRNA synthetase 3389 65.11 0 3846441..3847019 - 192 39936470 - RPA3407 - hypothetical protein 3390 69.02 +1 3847356..3847865 + 169 39936471 - RPA3408 - nitroreductase family protein 3391 66.08 0 3847917..3849791 - 624 39936472 - RPA3409 - metal-dependent hydrolase 3392 66.10 0 3849886..3852360 - 824 39936473 - RPA3410 - diguanylate cyclase/phosphodiesterase 3393 67.35 0 3852571..3853734 - 387 39936474 - RPA3411 - hypothetical protein 3394 68.41 +1 3853863..3854894 + 343 39936475 - RPA3412 - patatin-like phospholipase domain-containing protein 3395 64.78 0 3855126..3856241 - 371 39936476 - RPA3413 - hypothetical protein 3396 64.81 0 3856270..3858531 - 753 39936477 - RPA3414 - putative hydroxamate-type ferrisiderophore receptor 3397 66.19 0 3858681..3859316 + 211 39936478 - RPA3415 - TetR family transcriptional regulator 3398 66.20 0 3859338..3859766 - 142 39936479 - RPA3416 - CBS domain-containing protein 3399 67.19 0 3860004..3860774 - 256 39936480 - RPA3417 - rhomboid-like protein 3400 67.72 0 3861259..3861828 + 189 39936481 - RPA3418 - hypothetical protein 3401 65.88 0 3861798..3862562 - 254 39936482 - RPA3419 - Crp/FNR family transcriptional regulator 3402 65.04 0 3863062..3863613 + 183 39936483 - RPA3420 - type IV pilus assembly PilZ 3403 62.96 0 3863945..3864565 + 206 39936484 - RPA3421 - transglutaminase-like cysteine peptidase, BTLCP 3404 59.86 -1 3864703..3865290 - 195 39936485 - RPA3422 - MarR family transcriptional regulator 3405 63.33 0 3865814..3867313 + 499 39936486 - RPA3423 - hypothetical protein 3406 64.29 0 3867737..3867904 + 55 39936487 - RPA3424 - hypothetical protein 3407 63.65 0 3867936..3868466 - 176 39936488 - RPA3425 - hexapeptide repeat-containing transferase 3408 61.86 -1 3868526..3868858 - 110 39936489 - RPA3426 - hypothetical protein 3409 64.12 0 3869049..3869756 + 235 39936490 - RPA3427 - hypothetical protein 3410 56.71 -2 3869773..3870003 - 76 39936491 - RPA3428 - hypothetical protein 3411 62.92 0 3870160..3870987 - 275 39936492 cysE2 RPA3429 - serine O-acetyltransferase 3412 64.95 0 3871208..3871963 - 251 39936493 - RPA3430 - alpha/beta hydrolase fold 3413 66.32 0 3872133..3873281 - 382 39936494 - RPA3431 - hypothetical protein 3414 60.57 -1 3873487..3873732 + 81 39936495 - RPA3432 - hypothetical protein 3415 71.94 +2 3873751..3874944 + 397 39936496 - RPA3433 - salicylate 1-monooxygenase 3416 63.57 0 3875337..3875981 + 214 39936497 - RPA3434 - universal stress protein 3417 66.67 0 3876078..3876938 + 286 39936498 - RPA3435 - glycosyl transferase family protein 3418 64.71 0 3876964..3877473 + 169 39936499 - RPA3436 - GCN5-related N-acetyltransferase 3419 56.43 -2 3878064..3879167 + 367 39936500 - RPA3437 - hypothetical protein 3420 58.33 -2 3879239..3879502 - 87 39936501 - RPA3438 - hypothetical protein 3421 67.68 0 3880205..3881392 + 395 39936502 - RPA3439 - putative hydrolase 3422 68.93 +1 3881385..3882800 + 471 39936503 - RPA3440 - amidase 3423 65.48 0 3882893..3883822 + 309 39936504 - RPA3441 - enoyl-CoA hydratase 3424 64.86 0 3883848..3884624 - 258 39936505 - RPA3442 - putative cyclase 3425 64.34 0 3884651..3885640 - 329 39936506 - RPA3443 - isomerase/decarboxylase 3426 68.07 0 3885768..3886478 + 236 39936507 - RPA3444 - GntR family transcriptional regulator 3427 66.96 0 3886503..3888224 - 573 39936508 - RPA3445 - AMP-dependent synthetase and ligase 3428 67.34 0 3888385..3889272 - 295 39936509 - RPA3446 - 3-hydroxyisobutyrate dehydrogenase 3429 65.74 0 3889306..3890379 - 357 39936510 - RPA3447 - enoyl-CoA hydratase 3430 65.63 0 3890376..3891533 - 385 39936511 - RPA3448 - acyl-CoA dehydrogenase 3431 59.76 -1 3891530..3891949 - 139 39936512 - RPA3449 - PilT protein, N-terminal 3432 65.46 0 3892228..3893724 - 498 39936513 - RPA3450 - methylmalonate-semialdehyde dehydrogenase 3433 68.01 0 3893884..3894552 - 222 39936514 - RPA3451 - TetR family transcriptional regulator 3434 69.62 +1 3894626..3895201 - 191 39936515 - RPA3452 - phenylacetic acid degradation-related protein 3435 66.28 0 3895343..3896113 + 256 39936516 - RPA3453 - enoyl-CoA hydratase 3436 70.09 +1 3896238..3897524 + 428 39936517 - RPA3454 - MFS family transporter 3437 67.12 0 3897573..3899132 - 519 39936518 - RPA3455 - methylmalonyl-CoA decarboxylase alpha chain 3438 62.61 0 3900286..3900507 + 73 39936519 - RPA3457 - biotin/lipoyl attachment protein 3439 66.24 0 3900691..3901851 + 386 39936520 - RPA3458 - TRAP dicarboxylate family transporter DctP subunit 3440 66.47 0 3901879..3903945 + 688 39936521 - RPA3459 - TRAP dicarboxylate family transporter DctM/Q subunit 3441 65.05 0 3904066..3904620 + 184 39936522 - RPA3460 - hypothetical protein 3442 66.12 0 3904676..3905041 - 121 39936523 - RPA3461 - hypothetical protein 3443 67.57 0 3905038..3906252 - 404 39936524 - RPA3462 - thiolase 3444 67.16 0 3906356..3907573 - 405 39936525 - RPA3463 - hypothetical protein 3445 67.57 0 3907766..3908650 + 294 39936526 - RPA3464 - hypothetical protein 3446 66.60 0 3908870..3910396 - 508 39936527 - RPA3465 - putative long-chain-fatty-acid CoA ligase 3447 66.15 0 3910417..3911586 - 389 39936528 - RPA3466 - acetyl-CoA acetyltransferase 3448 67.04 0 3911835..3912899 - 354 39936529 - RPA3467 - NAD-dependent epimerase/dehydratase 3449 62.14 0 3913033..3913959 - 308 39936530 - RPA3468 - putative permease protein of sugar ABC transporter 3450 63.31 0 3913952..3914905 - 317 39936531 - RPA3469 - binding-protein-dependent transport systems inner membrane component 3451 63.35 0 3915123..3916448 - 441 39936532 - RPA3470 - putative sugar uptake ABC transporter periplasmic solute-binding protein precursor 3452 64.60 0 3916525..3917589 - 354 39936533 - RPA3471 - ABC transporter ATP-binding protein 3453 65.78 0 3917826..3919634 + 602 39936534 ilvD1 RPA3472 - dihydroxy-acid dehydratase 3454 68.16 0 3919768..3920502 + 244 39936535 ucpA RPA3473 - short-chain dehydrogenase/reductase SDR 3455 66.53 0 3920586..3921335 + 249 39936536 fabG4 RPA3474 - short-chain dehydrogenase/reductase SDR 3456 66.77 0 3921408..3922367 - 319 39936537 - RPA3475 - putative transposase 3457 68.30 0 3922797..3923591 - 264 39936538 - RPA3476 - energy transducer TonB 3458 63.33 0 3923696..3924145 - 149 39936539 exbD5 RPA3477 - exbD, uptake of enterochelin; tonB-dependent uptake of B colicins 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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