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Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3038 62.88 0 3458619..3459041 - 140 39936119 - RPA3056 - nucleoside-diphosphate kinase 3039 66.40 0 3459188..3461065 + 625 39936120 - RPA3057 - ABC transporter ATPase 3040 68.52 +1 3461069..3461608 - 179 39936121 - RPA3058 - hypothetical protein 3041 66.00 0 3461736..3462188 - 150 39936122 - RPA3059 - DNA polymerase III subunit chi 3042 66.33 0 3462199..3463701 - 500 39936123 - RPA3060 - leucyl aminopeptidase 3043 65.12 0 3464110..3465276 + 388 39936124 - RPA3061 - permease YjgP/YjgQ 3044 60.13 -1 3465290..3466375 + 361 39936125 - RPA3062 - permease YjgP/YjgQ 3045 63.56 0 3466375..3468888 + 837 39936126 - RPA3063 - organic solvent tolerance protein 3046 61.49 -1 3468967..3469893 + 308 39936127 - RPA3064 - hypothetical protein 3047 63.71 0 3469954..3470967 + 337 39936128 pdxA RPA3065 - 4-hydroxythreonine-4-phosphate dehydrogenase 3048 66.09 0 3470964..3471827 + 287 39936129 ksgA RPA3066 - dimethyladenosine transferase 3049 63.17 0 3471844..3472902 + 352 39936130 - RPA3067 - putative NAD-dependent alcohol dehydrogenase 3050 66.74 0 3472944..3474239 + 431 39936131 - RPA3068 - hypothetical protein 3051 64.86 0 3474243..3474905 - 220 39936132 gmk RPA3069 - guanylate kinase 3052 63.85 0 3474908..3475795 - 295 39936133 - RPA3070 - hypothetical protein 3053 65.71 0 3475897..3477153 - 418 39936134 - RPA3071 - aminodeoxychorismate lyase 3054 65.48 0 3477356..3478621 - 421 39936135 fabF RPA3072 - 3-oxoacyl-(acyl carrier protein) synthase II 3055 55.83 -2 3478718..3478957 - 79 39936136 acpP RPA3073 - acyl carrier protein 3056 65.45 0 3479262..3479999 - 245 39936137 fabG2 RPA3074 - 3-oxoacyl-(acyl-carrier-protein) reductase 3057 68.12 0 3480019..3480978 - 319 39936138 fabD RPA3075 - malonyl CoA-acyl carrier protein transacylase 3058 64.74 0 3481244..3482593 + 449 39936139 - RPA3076 - putative diguanylate cyclase (GGDEF) 3059 65.20 0 3482765..3483241 + 158 39936140 rpsF RPA3077 - 30S ribosomal protein S6 3060 64.58 0 3483247..3483486 + 79 39936141 rpsR RPA3078 - 30S ribosomal protein S18 3061 68.77 +1 3483613..3484563 + 316 39936142 - RPA3079 - hypothetical protein 3062 65.65 0 3484599..3485186 + 195 39936143 rplI RPA3080 - 50S ribosomal protein L9 3063 71.30 +1 3485351..3486322 - 323 39936144 - RPA3081 - hypothetical protein 3064 65.15 0 3486581..3487831 + 416 39936145 cfa2 RPA3082 - cyclopropane-fatty-acyl-phospholipid synthase 3065 69.19 +1 3487853..3488050 - 65 39936146 - RPA3083 - hypothetical protein 3066 64.20 0 3488450..3489946 + 498 39936147 dnaB RPA3084 - replicative DNA helicase 3067 67.95 0 3490014..3491255 + 413 39936148 - RPA3085 - alanine racemase 3068 62.79 0 3491385..3491642 - 85 39936149 - RPA3086 - hypothetical protein 3069 67.58 0 3491639..3493276 - 545 39936150 - RPA3087 - hypothetical protein 3070 65.90 0 3493736..3494128 - 130 39936151 - RPA3088 - hypothetical protein 3071 67.97 0 3494276..3495733 + 485 39936152 RadA RPA3089 - DNA repair protein RadA 3072 61.64 -1 3495947..3496582 + 211 39936153 - RPA3090 - colicin V production protein 3073 66.80 0 3496606..3498135 + 509 39936154 purF RPA3091 - amidophosphoribosyltransferase 3074 67.47 0 3498265..3499008 + 247 39936155 - RPA3092 - putative oxidoreductase 3075 63.24 0 3499092..3500318 + 408 39936156 - RPA3093 - urea/short-chain binding protein of ABC transporter 3076 67.29 0 3500339..3501625 - 428 39936157 - RPA3094 - major facilitator transporter 3077 66.81 0 3501622..3503001 - 459 39936158 engA RPA3095 - GTP-binding protein EngA 3078 71.01 +1 3503075..3503626 - 183 39936159 - RPA3096 - hypothetical protein 3079 65.65 0 3503672..3504361 - 229 39936160 - RPA3097 - hypothetical protein 3080 64.85 0 3504491..3505315 - 274 39936161 panB RPA3098 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 3081 65.13 0 3505318..3505902 - 194 39936162 - RPA3099 - NnrU family protein 3082 67.96 0 3506040..3507044 + 334 39936163 - RPA3100 - hypothetical protein 3083 61.52 -1 3507093..3507578 - 161 39936164 - RPA3101 - hypothetical protein 3084 65.17 0 3507682..3507948 - 88 39936165 - RPA3102 - hypothetical protein 3085 56.72 -2 3508623..3508823 - 66 39936166 - RPA3103 - hypothetical protein 3086 63.03 0 3509284..3510768 - 494 39936167 gatB RPA3104 - aspartyl/glutamyl-tRNA amidotransferase subunit B 3087 68.25 0 3510864..3512249 - 461 39936168 - RPA3105 - patatin-like phospholipase domain-containing protein 3088 64.32 0 3512391..3513497 - 368 39936169 - RPA3106 - signal transduction histidine kinase 3089 67.88 0 3513574..3515052 - 492 39936170 gatA RPA3107 - aspartyl/glutamyl-tRNA amidotransferase subunit A 3090 58.68 -2 3515232..3515519 + 95 39936171 - RPA3108 - hypothetical protein 3091 64.21 0 3515467..3515751 + 94 39936172 - RPA3109 - hypothetical protein 3092 63.77 0 3515755..3515961 - 68 39936173 - RPA3110 - hypothetical protein 3093 62.15 0 3515973..3516260 - 95 39936174 gatC RPA3111 - aspartyl/glutamyl-tRNA amidotransferase subunit C 3094 70.10 +1 3516348..3517424 - 358 39936175 - RPA3112 - 2-nitropropane dioxygenase, NPD 3095 71.01 +1 3517583..3518065 + 160 39936176 - RPA3113 - Holliday junction resolvase YqgF 3096 66.15 0 3518087..3518473 + 128 39936177 - RPA3114 - SecC motif-containing protein 3097 65.84 0 3518600..3520285 - 561 39936178 - RPA3115 - acyl-CoA dehydrogenase 3098 66.91 0 3520331..3521962 - 543 39936179 ipdC RPA3116 - indole-3-pyruvate decarboxylase 3099 65.93 0 3522153..3523106 + 317 39936180 pyrB RPA3117 - aspartate carbamoyltransferase catalytic subunit 3100 67.81 0 3523126..3524436 + 436 39936181 pyr RPA3118 - dihydroorotase 3101 63.89 0 3524580..3525191 + 203 39936182 - RPA3119 - putative glycerol-3-phosphate acyltransferase PlsY 3102 70.60 +1 3525318..3526460 + 380 39936183 DprA RPA3120 - DNA processing protein DprA, putative 3103 62.70 0 3526551..3527963 + 470 39936184 - RPA3121 - putative alginate o-acetyltransferase AlgI 3104 65.91 0 3527968..3529158 + 396 39936185 - RPA3122 - hypothetical protein 3105 59.52 -1 3529411..3529704 - 97 39936186 - RPA3123 - hypothetical protein 3106 66.30 0 3529873..3532608 + 911 39936187 TopA RPA3124 - DNA topoisomerase I 3107 66.58 0 3532611..3534956 + 781 39936188 RNR RPA3125 - ribonuclease R 3108 64.80 0 3534956..3535384 + 142 39936189 - RPA3126 - hypothetical protein 3109 67.59 0 3535454..3536209 + 251 39936190 - RPA3127 - NUDIX hydrolase 3110 70.23 +1 3536244..3537392 - 382 39936191 - RPA3128 - putative transport protein 3111 54.17 -2 3537789..3537956 + 55 39936192 rpmG RPA3129 - 50S ribosomal protein L33 3112 61.72 -1 3538223..3538606 - 127 39936193 - RPA3130 - XRE family transcriptional regulator 3113 56.92 -2 3538617..3538934 - 105 39936194 - RPA3131 - hypothetical protein 3114 65.07 0 3538970..3540343 - 457 39936195 pleD RPA3132 - response regulator PleD 3115 59.56 -1 3540354..3540719 - 121 39936196 - RPA3133 - response regulator receiver (CheY-like protein) 3116 63.33 0 3540845..3541144 + 99 39936197 - RPA3134 - hypothetical protein 3117 68.21 0 3541141..3542436 + 431 39936198 dinP RPA3135 - DNA polymerase IV 3118 61.71 -1 3542561..3543427 - 288 39936199 - RPA3136 - hypothetical protein 3119 67.29 0 3543689..3544168 + 159 39936200 - RPA3137 - endoribonuclease L-PSP 3120 67.87 0 3544187..3544933 + 248 39936201 - RPA3138 - glycerophosphoryl diester phosphodiesterase 3121 63.18 0 3544936..3546255 + 439 39936202 - RPA3139 - hypothetical protein 3122 63.48 0 3546263..3546733 + 156 39936203 - RPA3140 - histidine triad (HIT) protein 3123 65.37 0 3546739..3547200 - 153 39936204 - RPA3141 - hypothetical protein 3124 66.96 0 3547249..3547593 - 114 39936205 - RPA3142 - hypothetical protein 3125 69.22 +1 3547590..3548333 - 247 39936206 - RPA3143 - hypothetical protein 3126 64.17 0 3548486..3548845 + 119 39936207 - RPA3144 - hypothetical protein 3127 67.56 0 3548862..3549977 - 371 39936208 - RPA3145 - transglycosylase SLT domain-containing protein 3128 68.47 +1 3550605..3552380 + 591 39936209 - RPA3146 - hypothetical protein 3129 62.73 0 3552454..3554838 - 794 39936210 clpA RPA3147 - endopeptidase Clp: ATP-binding chain A 3130 61.15 -1 3555032..3555430 - 132 39936211 clpS RPA3148 - ATP-dependent Clp protease adaptor protein ClpS 3131 62.13 0 3555834..3557201 + 455 39936212 - RPA3149 - hypothetical protein 3132 67.86 0 3557558..3559315 + 585 39936213 - RPA3150 - Serine-type D-Ala-D-Ala carboxypeptidase 3133 65.71 0 3559644..3560372 - 242 39936214 - RPA3151 - heat shock protein DnaJ, N-terminal 3134 71.66 +2 3560428..3561168 - 246 39936215 - RPA3152 - hypothetical protein 3135 62.21 0 3561248..3562078 - 276 39936216 - RPA3153 - hypothetical protein 3136 64.83 0 3562350..3563273 - 307 39936217 - RPA3154 - chromosome partitioning protein ParA 3137 66.31 0 3563540..3564391 + 283 39936218 panC RPA3155 - pantoate--beta-alanine ligase 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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