version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2964 63.48 0 3377728..3378324 - 198 39936045 - RPA2980 - integrase 2965 63.61 0 3378321..3378647 - 108 39936046 - RPA2981 - P2 ISBm2 2966 58.05 -2 3378641..3378907 - 88 39936047 - RPA2982 - hypothetical protein 2967 63.75 0 3379718..3380197 + 159 39936048 - RPA2983 - hypothetical protein 2968 65.54 0 3380294..3381445 - 383 39936049 - RPA2984 - putative diguanylate cyclase (GGDEF) 2969 69.14 +1 3381693..3382379 + 228 39936050 - RPA2985 - hypothetical protein 2970 66.96 0 3383055..3383399 - 114 39936051 - RPA2986 - 5-carboxymethyl-2-hydroxymuconate delta isomerase 2971 71.87 +2 3383593..3384438 + 281 39936052 - RPA2987 - hypothetical protein 2972 65.28 0 3384525..3385103 + 192 39936053 yrkN RPA2988 - GCN5-related N-acetyltransferase 2973 69.76 +1 3385144..3386145 + 333 39936054 - RPA2989 - putative quinone oxidoreductase 2974 63.82 0 3386280..3386771 - 163 39936055 - RPA2990 - hypothetical protein 2975 68.01 0 3386893..3387189 - 98 39936056 - RPA2991 - hypothetical protein 2976 65.50 0 3387497..3388180 - 227 39936057 - RPA2992 - hypothetical protein 2977 70.95 +1 3388210..3388863 - 217 39936058 - RPA2993 - hypothetical protein 2978 67.92 0 3388995..3389873 - 292 39936059 - RPA2994 - LysR family transcriptional regulator 2979 69.85 +1 3389982..3391553 + 523 39936060 nuoL3 RPA2995 - NADH-ubiquinone/plastoquinone (complex I) 2980 68.15 0 3391575..3394001 + 808 39936061 - RPA2996 - hypothetical protein 2981 59.03 -1 3394158..3394445 + 95 39936062 - RPA2997 - hypothetical protein 2982 65.15 0 3394449..3395372 + 307 39936063 dapA1 RPA2998 - putative dihydrodipicolinate synthase 2983 66.44 0 3395404..3395850 - 148 39936064 ptsN2 RPA2999 - putative nitrogen regulatory IIA protein 2984 62.57 0 3395874..3396557 - 227 39936065 kdpE RPA3000 - two-component osmotic transcriptional regulator KdpE 2985 66.12 0 3396563..3399286 - 907 39936066 kdpD RPA3001 - two component osmosensitive K+channel and sensor histidine kinase, KdpD 2986 66.50 0 3399332..3399937 - 201 39936067 kdpC RPA3002 - potassium-transporting ATPase, C subunit 2987 65.31 0 3399950..3402079 - 709 39936068 kdpB RPA3003 - potassium-transporting ATPase subunit B 2988 63.09 0 3402089..3403792 - 567 39936069 kdpA RPA3004 - potassium-transporting ATPase subunit A 2989 62.24 0 3404124..3404417 + 97 39936070 - RPA3005 - hypothetical protein 2990 64.53 0 3404723..3405283 + 186 39936071 - RPA3006 - hypothetical protein 2991 63.56 0 3405291..3406031 + 246 39936072 - RPA3007 - hypothetical protein 2992 62.15 0 3406021..3407925 - 634 39936073 kup2 RPA3008 - potassium uptake protein Kup 2993 57.69 -2 3408431..3408586 + 51 39936074 pucBc RPA3009 - light harvesting protein B-800-850, beta chain C (antenna pigment protein, beta chain C) (LH II-C beta) 2994 59.47 -1 3409321..3409959 - 212 39936075 - RPA3011 - hypothetical protein 2995 58.89 -2 3410110..3410289 - 59 39936076 pucAd RPA3012 - light harvesting protein B-800-850, alpha chain D (antenna pigment protein, alpha chain D) (LH II-D alpha) 2996 57.69 -2 3410302..3410457 - 51 39936077 pucBd RPA3013 - light harvesting protein B-800-850, beta chain D (antenna pigment protein, beta chain D) (LH II-D beta) 2997 63.56 0 3410877..3411584 + 235 39936078 - RPA3014 - two-component LuxR family transcriptional regulator 2998 64.38 0 3411808..3414084 + 758 39936079 phyB1 RPA3015 - bacteriophytochrome PhyB 2999 64.30 0 3414088..3416415 + 775 39936080 phyB2 RPA3016 - bacteriophytochrome PhyB 3000 62.15 0 3416416..3416880 + 154 39936081 rphyB RPA3017 - response regulator receiver (CheY-like protein) 3001 65.08 0 3416877..3418013 + 378 39936082 - RPA3018 - response regulator receiver sensor signal transduction histidine kinase 3002 66.67 0 3421479..3422678 - 399 39936083 mexE RPA3020 - RND multidrug efflux membrane fusion protein MexE precursor 3003 68.37 0 3422874..3423461 + 195 39936084 - RPA3021 - TetR family transcriptional regulator 3004 66.92 0 3423592..3424758 + 388 39936085 - RPA3022 - putative diguanylate cyclase (GGDEF) 3005 64.03 0 3424892..3425878 + 328 39936086 - RPA3023 - aldo/keto reductase 3006 64.23 0 3425900..3426310 - 136 39936087 - RPA3024 - hypothetical protein 3007 67.28 0 3426447..3426773 + 108 39936088 - RPA3025 - hypothetical protein 3008 64.82 0 3426819..3427469 + 216 39936089 - RPA3026 - abortive infection protein 3009 64.47 0 3427479..3429341 - 620 39936090 kup1 RPA3027 - K+ potassium transporter 3010 66.90 0 3429602..3430441 - 279 39936091 - RPA3028 - hypothetical protein 3011 50.27 -2 3430730..3430912 + 60 39936092 - RPA3029 - hypothetical protein 3012 63.97 0 3431088..3431384 + 98 39936093 - RPA3030 - hypothetical protein 3013 62.18 0 3431503..3432126 - 207 39936094 - RPA3031 - acetyltransferase 3014 64.91 0 3432381..3432779 - 132 39936095 - RPA3032 - phenylacetic acid degradation-like protein 3015 63.31 0 3432927..3434207 - 426 39936096 argE RPA3033 - acetylornithine deacetylase 3016 64.02 0 3434340..3434603 + 87 39936097 - RPA3034 - hypothetical protein 3017 64.27 0 3434632..3435048 - 138 39936098 - RPA3035 - hypothetical protein 3018 58.63 -2 3435160..3435408 - 82 39936099 - RPA3036 - hypothetical protein 3019 61.49 -1 3436290..3436868 - 192 39936100 - RPA3037 - CreA family protein 3020 66.11 0 3437018..3438631 + 537 39936101 - RPA3038 - hypothetical protein 3021 65.71 0 3438785..3439723 + 312 39936102 - RPA3039 - polysaccharide deacetylase 3022 68.97 +1 3439761..3440324 + 187 39936103 - RPA3040 - hypothetical protein 3023 64.44 0 3440328..3440777 - 149 39936104 - RPA3041 - hypothetical protein 3024 66.75 0 3440872..3443196 - 774 39936105 mao RPA3042 - malic enzyme 3025 65.43 0 3443227..3445002 - 591 39936106 aspS RPA3043 - aspartyl-tRNA synthetase 3026 67.14 0 3445262..3446740 + 492 39936107 - RPA3044 - hypothetical protein 3027 66.24 0 3446844..3448022 + 392 39936108 rnd RPA3045 - ribonuclease D 3028 66.34 0 3448019..3448942 + 307 39936109 - RPA3046 - hypothetical protein 3029 67.20 0 3448964..3450469 - 501 39936110 - RPA3047 - Ppx/GppA phosphatase 3030 64.35 0 3450482..3452773 - 763 39936111 - RPA3048 - polyphosphate kinase 3031 67.97 0 3452843..3453532 - 229 39936112 - RPA3049 - hypothetical protein 3032 61.43 -1 3453563..3454192 - 209 39936113 - RPA3050 - CDP-alcohol phosphatidyltransferase 3033 67.32 0 3454375..3455448 + 357 39936114 purM RPA3051 - phosphoribosylaminoimidazole synthetase 3034 67.13 0 3455457..3456110 + 217 39936115 purN RPA3052 - phosphoribosylglycinamide formyltransferase 3035 54.90 -2 3456174..3456377 - 67 39936116 cspA3 RPA3053 - cold-shock DNA-binding domain protein 3036 62.79 0 3456869..3457642 + 257 39936117 - RPA3054 - Crp/FNR family transcriptional regulator 3037 64.11 0 3457725..3458546 - 273 39936118 - RPA3055 - TerC family integral membrane protein 3038 62.88 0 3458619..3459041 - 140 39936119 - RPA3056 - nucleoside-diphosphate kinase 3039 66.40 0 3459188..3461065 + 625 39936120 - RPA3057 - ABC transporter ATPase 3040 68.52 +1 3461069..3461608 - 179 39936121 - RPA3058 - hypothetical protein 3041 66.00 0 3461736..3462188 - 150 39936122 - RPA3059 - DNA polymerase III subunit chi 3042 66.33 0 3462199..3463701 - 500 39936123 - RPA3060 - leucyl aminopeptidase 3043 65.12 0 3464110..3465276 + 388 39936124 - RPA3061 - permease YjgP/YjgQ 3044 60.13 -1 3465290..3466375 + 361 39936125 - RPA3062 - permease YjgP/YjgQ 3045 63.56 0 3466375..3468888 + 837 39936126 - RPA3063 - organic solvent tolerance protein 3046 61.49 -1 3468967..3469893 + 308 39936127 - RPA3064 - hypothetical protein 3047 63.71 0 3469954..3470967 + 337 39936128 pdxA RPA3065 - 4-hydroxythreonine-4-phosphate dehydrogenase 3048 66.09 0 3470964..3471827 + 287 39936129 ksgA RPA3066 - dimethyladenosine transferase 3049 63.17 0 3471844..3472902 + 352 39936130 - RPA3067 - putative NAD-dependent alcohol dehydrogenase 3050 66.74 0 3472944..3474239 + 431 39936131 - RPA3068 - hypothetical protein 3051 64.86 0 3474243..3474905 - 220 39936132 gmk RPA3069 - guanylate kinase 3052 63.85 0 3474908..3475795 - 295 39936133 - RPA3070 - hypothetical protein 3053 65.71 0 3475897..3477153 - 418 39936134 - RPA3071 - aminodeoxychorismate lyase 3054 65.48 0 3477356..3478621 - 421 39936135 fabF RPA3072 - 3-oxoacyl-(acyl carrier protein) synthase II 3055 55.83 -2 3478718..3478957 - 79 39936136 acpP RPA3073 - acyl carrier protein 3056 65.45 0 3479262..3479999 - 245 39936137 fabG2 RPA3074 - 3-oxoacyl-(acyl-carrier-protein) reductase 3057 68.12 0 3480019..3480978 - 319 39936138 fabD RPA3075 - malonyl CoA-acyl carrier protein transacylase 3058 64.74 0 3481244..3482593 + 449 39936139 - RPA3076 - putative diguanylate cyclase (GGDEF) 3059 65.20 0 3482765..3483241 + 158 39936140 rpsF RPA3077 - 30S ribosomal protein S6 3060 64.58 0 3483247..3483486 + 79 39936141 rpsR RPA3078 - 30S ribosomal protein S18 3061 68.77 +1 3483613..3484563 + 316 39936142 - RPA3079 - hypothetical protein 3062 65.65 0 3484599..3485186 + 195 39936143 rplI RPA3080 - 50S ribosomal protein L9 3063 71.30 +1 3485351..3486322 - 323 39936144 - RPA3081 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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