version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2940 65.87 0 3341940..3345080 + 1046 39936021 mexF RPA2956 - putative RND multidrug efflux transporter MexF 2941 66.48 0 3345579..3348227 + 882 39936022 - RPA2957 - putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) 2942 60.61 -1 3348336..3349376 - 346 39936023 - RPA2958 - putative DNA-binding protein 2943 63.54 0 3349571..3352003 - 810 39936024 lon RPA2959 - ATP-dependent protease La 2944 62.59 0 3352313..3353587 - 424 39936025 clpX RPA2960 - ATP-dependent protease ATP-binding subunit 2945 62.13 0 3353980..3354618 - 212 39936026 clpP RPA2961 - endopeptidase Clp 2946 64.31 0 3354932..3356290 - 452 39936027 tig RPA2962 - trigger factor 2947 61.81 -1 3356681..3357154 - 157 39936028 - RPA2963 - hypothetical protein 2948 69.49 +1 3357277..3358482 + 401 39936029 - RPA2964 - multicopper oxidase, type 1 2949 70.53 +1 3358531..3360030 - 499 39936030 yjeF RPA2965 - hypothetical protein 2950 59.88 -1 3360442..3360780 + 112 39936031 glnB RPA2966 - nitrogen regulatory protein P-II 2951 61.99 -1 3360870..3362279 + 469 39936032 glnA RPA2967 - glutamine synthetase, type I 2952 67.33 0 3362578..3363327 + 249 39936033 - RPA2968 - TetR family transcriptional regulator 2953 66.67 0 3363340..3363951 + 203 39936034 - RPA2969 - hypothetical protein 2954 66.51 0 3364094..3365371 - 425 39936035 bioA RPA2970 - adenosylmethionine--8-amino-7-oxononanoate transaminase 2955 69.01 +1 3365368..3366006 - 212 39936036 bioD RPA2971 - dithiobiotin synthetase 2956 68.35 0 3366003..3367133 - 376 39936037 bioF RPA2972 - 8-amino-7-oxononanoate synthase 2957 68.26 0 3367274..3367837 - 187 39936038 - RPA2973 - hypothetical protein 2958 66.11 0 3367926..3369356 - 476 39936039 - RPA2974 - putative 6-aminohexanoate-cyclic-dimer hydrolase 2959 67.37 0 3369556..3370545 - 329 39936040 serA1 RPA2975 - putative phosphoglycerate dehydrogenase 2960 70.67 +1 3370654..3371553 - 299 39936041 - RPA2976 - DMT family permease 2961 65.53 0 3372218..3375991 + 1257 39936042 nrd RPA2977 - ribonucleotide-diphosphate reductase subunit alpha 2962 45.94 -2 3376115..3377209 + 364 39936043 - RPA2978 - hypothetical protein 2963 65.86 0 3377373..3377621 + 82 39936044 - RPA2979 - hypothetical protein 2964 63.48 0 3377728..3378324 - 198 39936045 - RPA2980 - integrase 2965 63.61 0 3378321..3378647 - 108 39936046 - RPA2981 - P2 ISBm2 2966 58.05 -2 3378641..3378907 - 88 39936047 - RPA2982 - hypothetical protein 2967 63.75 0 3379718..3380197 + 159 39936048 - RPA2983 - hypothetical protein 2968 65.54 0 3380294..3381445 - 383 39936049 - RPA2984 - putative diguanylate cyclase (GGDEF) 2969 69.14 +1 3381693..3382379 + 228 39936050 - RPA2985 - hypothetical protein 2970 66.96 0 3383055..3383399 - 114 39936051 - RPA2986 - 5-carboxymethyl-2-hydroxymuconate delta isomerase 2971 71.87 +2 3383593..3384438 + 281 39936052 - RPA2987 - hypothetical protein 2972 65.28 0 3384525..3385103 + 192 39936053 yrkN RPA2988 - GCN5-related N-acetyltransferase 2973 69.76 +1 3385144..3386145 + 333 39936054 - RPA2989 - putative quinone oxidoreductase 2974 63.82 0 3386280..3386771 - 163 39936055 - RPA2990 - hypothetical protein 2975 68.01 0 3386893..3387189 - 98 39936056 - RPA2991 - hypothetical protein 2976 65.50 0 3387497..3388180 - 227 39936057 - RPA2992 - hypothetical protein 2977 70.95 +1 3388210..3388863 - 217 39936058 - RPA2993 - hypothetical protein 2978 67.92 0 3388995..3389873 - 292 39936059 - RPA2994 - LysR family transcriptional regulator 2979 69.85 +1 3389982..3391553 + 523 39936060 nuoL3 RPA2995 - NADH-ubiquinone/plastoquinone (complex I) 2980 68.15 0 3391575..3394001 + 808 39936061 - RPA2996 - hypothetical protein 2981 59.03 -1 3394158..3394445 + 95 39936062 - RPA2997 - hypothetical protein 2982 65.15 0 3394449..3395372 + 307 39936063 dapA1 RPA2998 - putative dihydrodipicolinate synthase 2983 66.44 0 3395404..3395850 - 148 39936064 ptsN2 RPA2999 - putative nitrogen regulatory IIA protein 2984 62.57 0 3395874..3396557 - 227 39936065 kdpE RPA3000 - two-component osmotic transcriptional regulator KdpE 2985 66.12 0 3396563..3399286 - 907 39936066 kdpD RPA3001 - two component osmosensitive K+channel and sensor histidine kinase, KdpD 2986 66.50 0 3399332..3399937 - 201 39936067 kdpC RPA3002 - potassium-transporting ATPase, C subunit 2987 65.31 0 3399950..3402079 - 709 39936068 kdpB RPA3003 - potassium-transporting ATPase subunit B 2988 63.09 0 3402089..3403792 - 567 39936069 kdpA RPA3004 - potassium-transporting ATPase subunit A 2989 62.24 0 3404124..3404417 + 97 39936070 - RPA3005 - hypothetical protein 2990 64.53 0 3404723..3405283 + 186 39936071 - RPA3006 - hypothetical protein 2991 63.56 0 3405291..3406031 + 246 39936072 - RPA3007 - hypothetical protein 2992 62.15 0 3406021..3407925 - 634 39936073 kup2 RPA3008 - potassium uptake protein Kup 2993 57.69 -2 3408431..3408586 + 51 39936074 pucBc RPA3009 - light harvesting protein B-800-850, beta chain C (antenna pigment protein, beta chain C) (LH II-C beta) 2994 59.47 -1 3409321..3409959 - 212 39936075 - RPA3011 - hypothetical protein 2995 58.89 -2 3410110..3410289 - 59 39936076 pucAd RPA3012 - light harvesting protein B-800-850, alpha chain D (antenna pigment protein, alpha chain D) (LH II-D alpha) 2996 57.69 -2 3410302..3410457 - 51 39936077 pucBd RPA3013 - light harvesting protein B-800-850, beta chain D (antenna pigment protein, beta chain D) (LH II-D beta) 2997 63.56 0 3410877..3411584 + 235 39936078 - RPA3014 - two-component LuxR family transcriptional regulator 2998 64.38 0 3411808..3414084 + 758 39936079 phyB1 RPA3015 - bacteriophytochrome PhyB 2999 64.30 0 3414088..3416415 + 775 39936080 phyB2 RPA3016 - bacteriophytochrome PhyB 3000 62.15 0 3416416..3416880 + 154 39936081 rphyB RPA3017 - response regulator receiver (CheY-like protein) 3001 65.08 0 3416877..3418013 + 378 39936082 - RPA3018 - response regulator receiver sensor signal transduction histidine kinase 3002 66.67 0 3421479..3422678 - 399 39936083 mexE RPA3020 - RND multidrug efflux membrane fusion protein MexE precursor 3003 68.37 0 3422874..3423461 + 195 39936084 - RPA3021 - TetR family transcriptional regulator 3004 66.92 0 3423592..3424758 + 388 39936085 - RPA3022 - putative diguanylate cyclase (GGDEF) 3005 64.03 0 3424892..3425878 + 328 39936086 - RPA3023 - aldo/keto reductase 3006 64.23 0 3425900..3426310 - 136 39936087 - RPA3024 - hypothetical protein 3007 67.28 0 3426447..3426773 + 108 39936088 - RPA3025 - hypothetical protein 3008 64.82 0 3426819..3427469 + 216 39936089 - RPA3026 - abortive infection protein 3009 64.47 0 3427479..3429341 - 620 39936090 kup1 RPA3027 - K+ potassium transporter 3010 66.90 0 3429602..3430441 - 279 39936091 - RPA3028 - hypothetical protein 3011 50.27 -2 3430730..3430912 + 60 39936092 - RPA3029 - hypothetical protein 3012 63.97 0 3431088..3431384 + 98 39936093 - RPA3030 - hypothetical protein 3013 62.18 0 3431503..3432126 - 207 39936094 - RPA3031 - acetyltransferase 3014 64.91 0 3432381..3432779 - 132 39936095 - RPA3032 - phenylacetic acid degradation-like protein 3015 63.31 0 3432927..3434207 - 426 39936096 argE RPA3033 - acetylornithine deacetylase 3016 64.02 0 3434340..3434603 + 87 39936097 - RPA3034 - hypothetical protein 3017 64.27 0 3434632..3435048 - 138 39936098 - RPA3035 - hypothetical protein 3018 58.63 -2 3435160..3435408 - 82 39936099 - RPA3036 - hypothetical protein 3019 61.49 -1 3436290..3436868 - 192 39936100 - RPA3037 - CreA family protein 3020 66.11 0 3437018..3438631 + 537 39936101 - RPA3038 - hypothetical protein 3021 65.71 0 3438785..3439723 + 312 39936102 - RPA3039 - polysaccharide deacetylase 3022 68.97 +1 3439761..3440324 + 187 39936103 - RPA3040 - hypothetical protein 3023 64.44 0 3440328..3440777 - 149 39936104 - RPA3041 - hypothetical protein 3024 66.75 0 3440872..3443196 - 774 39936105 mao RPA3042 - malic enzyme 3025 65.43 0 3443227..3445002 - 591 39936106 aspS RPA3043 - aspartyl-tRNA synthetase 3026 67.14 0 3445262..3446740 + 492 39936107 - RPA3044 - hypothetical protein 3027 66.24 0 3446844..3448022 + 392 39936108 rnd RPA3045 - ribonuclease D 3028 66.34 0 3448019..3448942 + 307 39936109 - RPA3046 - hypothetical protein 3029 67.20 0 3448964..3450469 - 501 39936110 - RPA3047 - Ppx/GppA phosphatase 3030 64.35 0 3450482..3452773 - 763 39936111 - RPA3048 - polyphosphate kinase 3031 67.97 0 3452843..3453532 - 229 39936112 - RPA3049 - hypothetical protein 3032 61.43 -1 3453563..3454192 - 209 39936113 - RPA3050 - CDP-alcohol phosphatidyltransferase 3033 67.32 0 3454375..3455448 + 357 39936114 purM RPA3051 - phosphoribosylaminoimidazole synthetase 3034 67.13 0 3455457..3456110 + 217 39936115 purN RPA3052 - phosphoribosylglycinamide formyltransferase 3035 54.90 -2 3456174..3456377 - 67 39936116 cspA3 RPA3053 - cold-shock DNA-binding domain protein 3036 62.79 0 3456869..3457642 + 257 39936117 - RPA3054 - Crp/FNR family transcriptional regulator 3037 64.11 0 3457725..3458546 - 273 39936118 - RPA3055 - TerC family integral membrane protein 3038 62.88 0 3458619..3459041 - 140 39936119 - RPA3056 - nucleoside-diphosphate kinase 3039 66.40 0 3459188..3461065 + 625 39936120 - RPA3057 - ABC transporter ATPase 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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