version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2862 67.24 0 3256900..3258126 - 408 39935943 - RPA2878 - MDR related permease 2863 67.25 0 3258126..3258989 - 287 39935944 kdsA RPA2879 - 2-dehydro-3-deoxyphosphooctonate aldolase 2864 63.08 0 3258986..3259906 - 306 39935945 - RPA2880 - hypothetical protein 2865 57.63 -2 3260002..3260532 - 176 39935946 - RPA2881 - hypothetical protein 2866 62.32 0 3260682..3260957 + 91 39935947 - RPA2882 - hypothetical protein 2867 67.48 0 3260992..3261849 - 285 39935948 - RPA2883 - hypothetical protein 2868 69.31 +1 3261980..3262357 + 125 39935949 - RPA2884 - hypothetical protein 2869 60.54 -1 3262467..3262613 + 48 39935950 - RPA2885 - hypothetical protein 2870 65.07 0 3262627..3264258 - 543 39935951 pyrG RPA2886 - CTP synthetase 2871 67.41 0 3264425..3264829 - 134 39935952 secG RPA2887 - preprotein translocase subunit SecG 2872 67.50 0 3265005..3265841 - 278 39935953 cbbJ RPA2888 - triose-phosphate isomerase 2873 67.88 0 3266039..3267940 + 633 39935954 - RPA2889 - PpiC-type peptidyl-prolyl cis-trans isomerase 2874 69.42 +1 3267977..3268993 + 338 39935955 trpD RPA2890 - anthranilate phosphoribosyltransferase 2875 67.36 0 3269058..3269921 + 287 39935956 trpC RPA2891 - indole-3-glycerol-phosphate synthase 2876 66.10 0 3269932..3270462 + 176 39935957 moaC RPA2892 - molybdenum cofactor biosynthesis protein C 2877 68.62 +1 3270500..3273058 + 852 39935958 - RPA2893 - ATPase, E1-E2 type 2878 66.88 0 3273186..3273662 - 158 39935959 - RPA2894 - hypothetical protein 2879 62.08 0 3273901..3274401 + 166 39935960 - RPA2895 - small heat shock protein 2880 67.47 0 3274570..3274818 + 82 39935961 - RPA2896 - hypothetical protein 2881 66.67 0 3274858..3275838 - 326 39935962 motB2 RPA2897 - chemotaxis protein MotB2 2882 65.71 0 3275975..3276601 + 208 39935963 - RPA2898 - haloacid dehalogenase-like hydrolase 2883 66.46 0 3276632..3277120 + 162 39935964 - RPA2899 - hypothetical protein 2884 62.32 0 3277268..3277681 + 137 39935965 - RPA2900 - rifampin ADP-ribosyl transferase 2885 68.71 +1 3277725..3278066 - 113 39935966 - RPA2901 - hypothetical protein 2886 71.37 +1 3278266..3279477 + 403 39935967 moeA RPA2902 - molybdenum cofactor biosynthesis protein A 2887 64.37 0 3279537..3280364 + 275 39935968 lexA RPA2903 - LexA repressor 2888 70.59 +1 3280435..3282702 - 755 39935969 - RPA2904 - ComEC/Rec2-related protein 2889 63.99 0 3282795..3284477 - 560 39935970 glnS RPA2905 - glutaminyl-tRNA synthetase 2890 67.09 0 3284639..3286060 + 473 39935971 gltX RPA2906 - glutamyl-tRNA synthetase 2891 61.38 -1 3286211..3287515 + 434 39935972 gltA RPA2907 - type II citrate synthase 2892 62.02 -1 3287610..3288254 - 214 39935973 - RPA2908 - cytidine/deoxycytidylate deaminase:Tat pathway signal 2893 68.87 +1 3288404..3289585 - 393 39935974 lpxB RPA2909 - lipid-A-disaccharide synthase 2894 68.88 +1 3289582..3290439 - 285 39935975 - RPA2910 - hypothetical protein 2895 65.95 0 3290458..3291300 - 280 39935976 lpxA RPA2911 - UDP-N-acetylglucosamine acyltransferase 2896 60.75 -1 3291309..3291764 - 151 39935977 - RPA2912 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2897 65.19 0 3291764..3292846 - 360 39935978 lpxD RPA2913 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2898 62.71 0 3292876..3295401 - 841 39935979 - RPA2914 - putative outer membrane protein 2899 63.37 0 3295574..3296725 - 383 39935980 - RPA2915 - peptidase M50, putative membrane-associated zinc metallopeptidase 2900 66.01 0 3296771..3297994 - 407 39935981 dxr RPA2916 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2901 67.02 0 3297999..3298847 - 282 39935982 cdsA RPA2917 - phosphatidate cytidylyltransferase 2902 65.74 0 3298853..3299611 - 252 39935983 uppS RPA2918 - undecaprenyl diphosphate synthase 2903 64.35 0 3299823..3300383 - 186 39935984 rrf RPA2919 - ribosome recycling factor 2904 64.85 0 3300449..3301165 - 238 39935985 pyrH RPA2920 - uridylate kinase 2905 64.51 0 3301233..3302159 - 308 39935986 tsf RPA2921 - elongation factor Ts 2906 64.86 0 3302284..3303279 - 331 39935987 rpsB RPA2922 - 30S ribosomal protein S2 2907 71.93 +2 3303514..3306003 - 829 39935988 - RPA2923 - hypothetical protein 2908 66.06 0 3306165..3309620 - 1151 39935989 dnaE RPA2924 - DNA polymerase III subunit alpha 2909 65.29 0 3310205..3310714 + 169 39935990 - RPA2925 - hypothetical protein 2910 66.67 0 3310911..3311609 - 232 39935991 - RPA2926 - lipoprotein ABC transporter ATP-binding protein 2911 63.54 0 3311621..3312901 - 426 39935992 - RPA2927 - lipoprotein releasing system, transmembrane protein, LolC/E family 2912 64.46 0 3312981..3314297 - 438 39935993 proS RPA2928 - prolyl-tRNA synthetase 2913 69.39 +1 3314473..3316053 - 526 39935994 - RPA2929 - hypothetical protein 2914 66.86 0 3316071..3316598 - 175 39935995 - RPA2930 - hypothetical protein 2915 64.44 0 3316598..3317137 - 179 39935996 - RPA2931 - hypothetical protein 2916 70.02 +1 3317263..3317679 - 138 39935997 - RPA2932 - hypothetical protein 2917 65.25 0 3318298..3318579 - 93 39935998 - RPA2933 - hypothetical protein 2918 65.43 0 3318583..3318987 - 134 39935999 - RPA2934 - glyoxalase/bleomycin resistance protein/dioxygenase 2919 66.67 0 3319029..3320699 - 556 39936000 - RPA2935 - Beta-lactamase-like 2920 69.14 +1 3320699..3321505 - 268 39936001 birA RPA2936 - biotin--acetyl-CoA-carboxylase ligase 2921 63.82 0 3321506..3322945 - 479 39936002 nuoN1 RPA2937 - NADH dehydrogenase subunit N 2922 64.16 0 3322965..3324482 - 505 39936003 nuoM1 RPA2938 - NADH dehydrogenase subunit M 2923 63.61 0 3324483..3326576 - 697 39936004 nuoL1 RPA2939 - NADH dehydrogenase subunit L 2924 60.58 -1 3326636..3326947 - 103 39936005 nuoK1 RPA2940 - NADH dehydrogenase subunit K 2925 63.69 0 3326944..3327582 - 212 39936006 nuoJ1 RPA2941 - NADH dehydrogenase subunit J 2926 63.60 0 3327592..3328080 - 162 39936007 nuoI1 RPA2942 - NADH dehydrogenase subunit I 2927 63.94 0 3328088..3329113 - 341 39936008 nuoH1 RPA2943 - NADH dehydrogenase subunit H 2928 68.11 0 3329123..3331207 - 694 39936009 nuoG1 RPA2944 - NADH dehydrogenase subunit G 2929 66.67 0 3331204..3332529 - 441 39936010 nuoF1 RPA2945 - NADH dehydrogenase I subunit F 2930 62.50 0 3332548..3332763 - 71 39936011 - RPA2946 - hypothetical protein 2931 66.27 0 3332760..3333509 - 249 39936012 nuoE1 RPA2947 - NADH dehydrogenase subunit E 2932 65.64 0 3333512..3334483 - 323 39936013 fkbM RPA2948 - FkbM family methyltransferase 2933 63.94 0 3334480..3335688 - 402 39936014 nuoD RPA2949 - NADH dehydrogenase subunit D 2934 62.44 0 3335740..3336354 - 204 39936015 nuoC RPA2950 - NADH dehydrogenase subunit C 2935 64.99 0 3336368..3336964 - 198 39936016 nuoB1 RPA2951 - NADH dehydrogenase subunit B 2936 54.92 -2 3336976..3337341 - 121 39936017 nuoA1 RPA2952 - NADH dehydrogenase subunit A 2937 64.10 0 3338656..3338967 + 103 39936018 hupA RPA2953 - DNA-binding protein HU-alpha (NS2) (HU-2) 2938 63.05 0 3339219..3340517 + 432 39936019 pepT RPA2954 - peptidase T 2939 66.99 0 3340667..3341911 + 414 39936020 mex RPA2955 - RND efflux membrane fusion protein precursor 2940 65.87 0 3341940..3345080 + 1046 39936021 mexF RPA2956 - putative RND multidrug efflux transporter MexF 2941 66.48 0 3345579..3348227 + 882 39936022 - RPA2957 - putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) 2942 60.61 -1 3348336..3349376 - 346 39936023 - RPA2958 - putative DNA-binding protein 2943 63.54 0 3349571..3352003 - 810 39936024 lon RPA2959 - ATP-dependent protease La 2944 62.59 0 3352313..3353587 - 424 39936025 clpX RPA2960 - ATP-dependent protease ATP-binding subunit 2945 62.13 0 3353980..3354618 - 212 39936026 clpP RPA2961 - endopeptidase Clp 2946 64.31 0 3354932..3356290 - 452 39936027 tig RPA2962 - trigger factor 2947 61.81 -1 3356681..3357154 - 157 39936028 - RPA2963 - hypothetical protein 2948 69.49 +1 3357277..3358482 + 401 39936029 - RPA2964 - multicopper oxidase, type 1 2949 70.53 +1 3358531..3360030 - 499 39936030 yjeF RPA2965 - hypothetical protein 2950 59.88 -1 3360442..3360780 + 112 39936031 glnB RPA2966 - nitrogen regulatory protein P-II 2951 61.99 -1 3360870..3362279 + 469 39936032 glnA RPA2967 - glutamine synthetase, type I 2952 67.33 0 3362578..3363327 + 249 39936033 - RPA2968 - TetR family transcriptional regulator 2953 66.67 0 3363340..3363951 + 203 39936034 - RPA2969 - hypothetical protein 2954 66.51 0 3364094..3365371 - 425 39936035 bioA RPA2970 - adenosylmethionine--8-amino-7-oxononanoate transaminase 2955 69.01 +1 3365368..3366006 - 212 39936036 bioD RPA2971 - dithiobiotin synthetase 2956 68.35 0 3366003..3367133 - 376 39936037 bioF RPA2972 - 8-amino-7-oxononanoate synthase 2957 68.26 0 3367274..3367837 - 187 39936038 - RPA2973 - hypothetical protein 2958 66.11 0 3367926..3369356 - 476 39936039 - RPA2974 - putative 6-aminohexanoate-cyclic-dimer hydrolase 2959 67.37 0 3369556..3370545 - 329 39936040 serA1 RPA2975 - putative phosphoglycerate dehydrogenase 2960 70.67 +1 3370654..3371553 - 299 39936041 - RPA2976 - DMT family permease 2961 65.53 0 3372218..3375991 + 1257 39936042 nrd RPA2977 - ribonucleotide-diphosphate reductase subunit alpha 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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