version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2532 67.25 0 2889640..2889981 - 113 39935613 - RPA2547 - hypothetical protein 2533 69.76 +1 2890202..2891008 + 268 39935614 - RPA2548 - hypothetical protein 2534 71.25 +1 2891005..2891484 + 159 39935615 - RPA2549 - hypothetical protein 2535 68.10 0 2891485..2892042 - 185 39935616 - RPA2550 - hypothetical protein 2536 71.17 +1 2892078..2892521 + 147 39935617 - RPA2551 - hypothetical protein 2537 57.01 -2 2893377..2893697 - 106 39935618 - RPA2552 - hypothetical protein 2538 68.68 +1 2894171..2899384 + 1737 39935619 - RPA2553 - hypothetical protein 2539 68.94 +1 2899381..2901576 + 731 39935620 - RPA2554 - penicillin-binding protein 1C 2540 67.70 0 2901627..2903372 + 581 39935621 - RPA2555 - glycosyl transferase family protein 2541 68.79 +1 2903374..2904222 + 282 39935622 - RPA2556 - phosphoesterase, PA-phosphatase related 2542 67.99 0 2904286..2905038 + 250 39935623 - RPA2557 - glycosyl transferase family protein 2543 60.47 -1 2905038..2905376 + 112 39935624 - RPA2558 - hypothetical protein 2544 67.84 0 2905539..2906735 - 398 39935625 metC RPA2559 - cystathionine beta-lyase 2545 62.44 0 2907057..2908073 + 338 39935626 aapJ-1 RPA2560 - ABC transporter, periplasmic amino acid binding protein aapJ-1 2546 65.26 0 2908094..2909299 + 401 39935627 aapQ-1 RPA2561 - polar amino acid ABC transport permease protein aapQ-1 2547 66.60 0 2909296..2910801 + 501 39935628 aapM-1 RPA2562 - polar amino acid ABC transport permease protein aapM-1 2548 62.75 0 2910817..2911557 + 246 39935629 aapP-1 RPA2563 - amino acid ABC transporter ATP-binding protein 2549 63.33 0 2911582..2911851 - 89 39935630 - RPA2564 - hypothetical protein 2550 60.87 -1 2911997..2912134 - 45 39935631 - RPA2565 - O-acetylserine (thiol) lyase C-terminal portion 2551 56.69 -2 2912351..2913934 + 527 39935632 - RPA2566 - putative EA59 gene protein, phage lambda 2552 53.81 -2 2913943..2914782 + 279 39935633 - RPA2567 - EA31 gene protein, phage lambda 2553 62.81 0 2914922..2915959 - 345 39935634 - RPA2568 - cysteine synthase A 2554 63.58 0 2916070..2917299 - 409 39935635 cfa1 RPA2569 - cyclopropane-fatty-acyl-phospholipid synthase 2555 64.78 0 2917359..2918204 - 281 39935636 - RPA2570 - hypothetical protein 2556 64.38 0 2918206..2919519 - 437 39935637 - RPA2571 - NADPH-dependent oxidoreductase 2557 66.87 0 2919954..2921402 + 482 39935638 - RPA2572 - RND efflux system, outer membrane lipoprotein, NodT 2558 68.20 0 2921392..2922762 + 456 39935639 - RPA2573 - membrane protein, permease 2559 66.32 0 2922833..2925964 + 1043 39935640 - RPA2574 - acriflavin resistance protein 2560 66.80 0 2925964..2929071 + 1035 39935641 - RPA2575 - acriflavin resistance protein 2561 69.54 +1 2929079..2929810 + 243 39935642 - RPA2576 - hypothetical protein 2562 64.35 0 2930223..2931692 + 489 39935643 - RPA2577 - putative alginate o-acetyltransferase AlgI 2563 61.90 -1 2931695..2932828 + 377 39935644 - RPA2578 - alginate o-acetyltransferase AlgJ 2564 65.13 0 2933211..2933600 - 129 39935645 - RPA2579 - hypothetical protein 2565 64.41 0 2934119..2934784 + 221 39935646 - RPA2580 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 2566 66.02 0 2934830..2936386 + 518 39935647 - RPA2581 - TolC family type I secretion outer membrane protein 2567 70.85 +1 2936679..2937467 + 262 39935648 - RPA2582 - hypothetical protein 2568 65.38 0 2937609..2940482 + 957 39935649 valS RPA2583 - valyl-tRNA synthetase 2569 68.73 +1 2940486..2940872 + 128 39935650 - RPA2584 - glyoxalase 2570 62.92 0 2941074..2941634 + 186 39935651 - RPA2585 - hypothetical protein 2571 69.03 +1 2941820..2942497 - 225 39935652 3mg RPA2586 - 3-methyladenine DNA glycosylase 2572 66.77 0 2942590..2943549 + 319 39935653 lipA2 RPA2587 - lipoyl synthase 2573 62.66 0 2943576..2944049 + 157 39935654 - RPA2588 - cyclase/dehydrase 2574 70.21 +1 2944131..2944751 - 206 39935655 cinA RPA2589 - competence damage-inducible protein A 2575 70.01 +1 2944754..2945950 - 398 39935656 ispD RPA2590 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2576 68.06 0 2946224..2947225 + 333 39935657 nifR3 RPA2591 - dihydrouridine synthase TIM-barrel protein NifR3 2577 64.02 0 2947222..2948394 + 390 39935658 ntrB RPA2592 - signal transduction histidine kinase, nitrogen specific, NtrB 2578 66.18 0 2948404..2949846 + 480 39935659 ntrC RPA2593 - nitrogen metabolism transcriptional regulator NtrC 2579 64.53 0 2950006..2952297 + 763 39935660 ntrY RPA2594 - multi-sensor signal transduction histidine kinase 2580 63.89 0 2952314..2953681 + 455 39935661 ntrX RPA2595 - two component, sigma54 specific, transcriptional regulator, Fis family 2581 65.85 0 2953722..2954579 + 285 39935662 - RPA2596 - D-amino acid aminotransferase 2582 55.02 -2 2954761..2955009 + 82 39935663 hfq RPA2597 - RNA-binding protein Hfq 2583 66.75 0 2955114..2956388 + 424 39935664 - RPA2598 - GTP-binding protein, HSR1-related 2584 64.81 0 2956591..2959332 + 913 161610772 gyrA RPA2599 - DNA gyrase subunit A 2585 63.10 0 2959517..2959936 + 139 39935666 - RPA2600 - hypothetical protein 2586 65.29 0 2960110..2960619 + 169 39935667 coaD RPA2601 - phosphopantetheine adenylyltransferase 2587 63.83 0 2960636..2961199 + 187 39935668 - RPA2602 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 2588 63.51 0 2961209..2961652 + 147 39935669 - RPA2603 - hypothetical protein 2589 63.89 0 2961628..2962095 + 155 39935670 - RPA2604 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 2590 68.49 +1 2962252..2963346 + 364 39935671 queA RPA2605 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2591 67.72 0 2963343..2964476 + 377 39935672 tgt RPA2606 - queuine tRNA-ribosyltransferase 2592 63.94 0 2965553..2966176 - 207 39935673 - RPA2607 - transcriptional regulator 2593 63.73 0 2966741..2967694 - 317 39935674 - RPA2608 - sulfonate binding protein 2594 64.74 0 2967856..2968425 - 189 39935675 - RPA2609 - monooxygenase 2595 66.67 0 2968436..2969281 - 281 39935676 ssuB RPA2610 - aliphatic sulfonate ABC transporter ATP-binding protein 2596 64.44 0 2969286..2970092 - 268 39935677 - RPA2611 - aliphatic sulfonate ABC transporter permease 2597 65.73 0 2970089..2971264 - 391 39935678 msuD RPA2612 - alkanesulfonate monooxygenase 2598 62.76 0 2971309..2972256 - 315 39935679 - RPA2613 - putative aliphatic sulfonate binding protein, subunit of ABC transporter 2599 60.72 -1 2972643..2973920 + 425 39935680 - RPA2614 - hypothetical protein 2600 64.26 0 2973960..2974832 + 290 39935681 nifH2 RPA2615 - putative nitrogenase iron protein (nitrogenase component II) (nitrogenase reductase) 2601 66.15 0 2974834..2976192 + 452 39935682 - RPA2616 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein 2602 66.83 0 2976189..2977439 + 416 39935683 - RPA2617 - vanadium nitrogenase associated protein N 2603 60.89 -1 2977601..2978587 - 328 39935684 - RPA2618 - putative sulfonate transport system substrate-binding protein 2604 63.99 0 2978920..2980524 + 534 39935685 - RPA2619 - GMC-type oxidoreductase 2605 64.53 0 2980614..2980940 - 108 39935686 - RPA2620 - hypothetical protein 2606 61.37 -1 2980972..2981481 - 169 39935687 - RPA2621 - hypothetical protein 2607 66.41 0 2981510..2982289 - 259 39935688 - RPA2622 - putative sulfonate transport system, ATP-binding protein. subunit of ABC transporter 2608 67.97 0 2982289..2983131 - 280 39935689 - RPA2623 - sulfonate transport system permease protein. subunit of an ABC transporter 2609 61.23 -1 2983255..2984229 - 324 39935690 - RPA2624 - putative sulfonate transport system substrate-binding protein 2610 66.25 0 2984782..2985990 - 402 39935691 - RPA2625 - putative cystathionine or methionine gamma-lyase 2611 65.51 0 2986232..2987266 - 344 39935692 - RPA2626 - hydrolase 2612 67.43 0 2987649..2989346 + 565 39935693 - RPA2627 - putative carboxylesterase 2613 63.64 0 2989377..2990399 + 340 39935694 aapJ-2 RPA2628 - polar amino acid ABC transport substrate-binding protein, aapJ-2 2614 65.38 0 2990420..2991589 + 389 39935695 aapQ-2 RPA2629 - polar amino acid ABC transpor permease protein, aapQ-2 2615 67.22 0 2991586..2992668 + 360 39935696 aapM-2 RPA2630 - polar amino acid ABC transport system protein, aapM-2 2616 60.74 -1 2993216..2994244 + 342 39935697 - RPA2631 - ABC transporter substrate-binding periplasmic protein 2617 61.96 -1 2994255..2995253 + 332 39935698 - RPA2632 - ABC transport permease 2618 62.12 0 2995253..2996065 + 270 39935699 - RPA2633 - nitrate ABC transporter ATP-binding protein 2619 63.43 0 2996908..2997804 + 298 39935700 nifB1 RPA2634 - putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifB 2620 63.45 0 2997843..2998712 + 289 39935701 nifH3 RPA2635 - putative nitrogenase reductase NifH subunit 2621 61.83 -1 2998778..3000286 + 502 39935702 NifD2 RPA2636 - nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) 2622 58.79 -2 3000298..3001680 + 460 39935703 - RPA2637 - nitrogenase iron-molybdenum protein subunit nifK-like protein 2623 67.43 0 3001975..3003279 + 434 39935704 - RPA2638 - oxidoreductase 2624 63.58 0 3003327..3003812 - 161 39935705 - RPA2639 - L-2-amino-thiazoline-4-carboxylic acid hydrolase 2625 65.15 0 3003809..3004531 - 240 39935706 - RPA2640 - isochorismatase hydrolase family protein 2626 59.86 -1 3004528..3006129 - 533 39935707 - RPA2641 - putative ABC transporter oligopeptide-binding protein 2627 60.83 -1 3006354..3007244 + 296 39935708 - RPA2642 - LysR family transcriptional regulator 2628 66.85 0 3007305..3008927 - 540 39935709 - RPA2643 - putative ABC transporter ATP-binding protein 2629 64.14 0 3008924..3009754 - 276 39935710 - RPA2644 - putative ABC transporter permease protein 2630 64.83 0 3009759..3010736 - 325 39935711 - RPA2645 - putative ABC transporter permease protein 2631 64.07 0 3010761..3012377 - 538 39935712 - RPA2646 - putative ABC transporter oligopeptide-binding protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0