version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2366 64.59 0 2694083..2696398 - 771 39935447 - RPA2378 - putative tonB-dependent receptor protein 2367 62.85 0 2696546..2697043 - 165 39935448 - RPA2379 - acetyltransferase 2368 62.37 0 2697057..2699288 - 743 39935449 - RPA2380 - tonB dependent iron siderophore receptor 2369 67.94 0 2699387..2700403 - 338 39935450 fecR4 RPA2381 - FecR, iron siderophore sensor protein 2370 62.19 0 2700496..2701254 - 252 39935451 - RPA2382 - putative iron(III) ABC transporter, ATP-binding protein 2371 66.56 0 2701251..2702201 - 316 39935452 - RPA2383 - putative iron(III) ABC transporter, permease protein 2372 67.18 0 2702194..2703171 - 325 39935453 - RPA2384 - putative ironIII transport permease protein 2373 65.01 0 2703168..2704073 - 301 39935454 - RPA2385 - putative ABC transporter, periplasmic Fe+3 siderophore binding protein 2374 62.96 0 2704064..2704981 - 305 39935455 - RPA2386 - hypothetical protein 2375 61.56 -1 2704981..2706291 - 436 39935456 - RPA2387 - hypothetical protein 2376 65.01 0 2706288..2707556 - 422 39935457 - RPA2388 - acyl-CoA synthetase 2377 64.54 0 2707553..2709241 - 562 39935458 - RPA2389 - rhizobactin siderophore biosynthesis protein RhsF 2378 62.96 0 2709270..2711051 - 593 39935459 - RPA2390 - rhizobactin siderophore biosynthesis protein rhbC 2379 61.49 -1 2711220..2711837 + 205 39935460 - RPA2391 - RNA polymerase ECF-type sigma factor, FecI 2380 64.04 0 2713351..2714226 + 291 39935461 prpC RPA2394 - putative 2-methylcitrate synthase 2381 65.58 0 2714237..2715154 + 305 39935462 prpB RPA2395 - putative carboxyphosphonoenolpyruvate phosphonomutase 2382 62.50 0 2715184..2715783 + 199 39935463 - RPA2396 - hypothetical protein 2383 63.29 0 2716133..2718499 + 788 39935464 metE RPA2397 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2384 60.69 -1 2719364..2721757 + 797 39935465 - RPA2398 - iron siderophore uptake receptor family protein 2385 63.36 0 2721766..2725668 + 1300 39935466 cobN RPA2399 - cobaltochelatase 2386 60.51 -1 2725671..2726141 + 156 39935467 - RPA2400 - hypothetical protein 2387 57.44 -2 2726141..2726476 + 111 39935468 - RPA2401 - hypothetical protein 2388 58.76 -2 2726837..2727190 + 117 39935469 - RPA2402 - hypothetical protein 2389 69.11 +1 2727725..2728216 + 163 39935470 - RPA2403 - iron-chelator utilization protein 2390 65.17 0 2728872..2729876 + 334 39935471 - RPA2404 - AraC family transcriptional regulator 2391 63.80 0 2729949..2730821 + 290 39935472 draT2 RPA2405 - NAD+ ADP-ribosyltransferase 2392 66.89 0 2730833..2731723 + 296 39935473 draG RPA2406 - ADP-ribosyl-(dinitrogen reductase) hydrolase 2393 59.52 -1 2732218..2732553 - 111 39935474 - RPA2407 - hypothetical protein 2394 65.11 0 2732949..2734106 + 385 39935475 amiC1 RPA2408 - putative aliphatic amidase expression-regulating protein, AmiC 2395 68.47 +1 2734103..2734768 + 221 39935476 - RPA2409 - AmiR antitermination protein 2396 61.90 -1 2734780..2736018 + 412 39935477 - RPA2410 - putative urea/short-chain amide transport system substrate-binding protein 2397 65.29 0 2736137..2737009 + 290 39935478 - RPA2411 - putative permease of ABC transporter 2398 64.51 0 2737021..2738085 + 354 39935479 - RPA2412 - ABC transporter permease 2399 64.32 0 2738085..2738807 + 240 39935480 - RPA2413 - putative urea/short-chain amide transport system ATP-binding protein 2400 66.25 0 2738800..2739513 + 237 39935481 - RPA2414 - putative urea/short-chain amide transport system ATP-binding protein 2401 63.03 0 2739539..2740528 + 329 39935482 - RPA2415 - acetamidase/formamidase 2402 65.46 0 2740543..2742282 + 579 39935483 - RPA2416 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2403 66.40 0 2742298..2743059 + 253 39935484 - RPA2417 - putative 3-ketoacyl-CoA reductase 2404 64.19 0 2745582..2747036 + 484 39935485 - RPA2419 - outer membrane protein, porin 2405 66.62 0 2747337..2749574 - 745 39935486 - RPA2420 - lytic transglycosylase, catalytic 2406 66.67 0 2750691..2751101 + 136 39935487 - RPA2421 - NADH dehydrogenase 2407 67.83 0 2751142..2751831 - 229 39935488 - RPA2422 - hypothetical protein 2408 69.12 +1 2751955..2752893 + 312 39935489 - RPA2423 - AraC family transcriptional regulator 2409 67.44 0 2752915..2754342 - 475 39935490 - RPA2424 - agarase 2410 68.36 0 2754356..2755300 - 314 39935491 - RPA2425 - putative lipase/esterase 2411 71.31 +1 2755533..2756522 + 329 39935492 - RPA2426 - hypothetical protein 2412 62.57 0 2756723..2757967 - 414 39935493 - RPA2427 - serine protease 2413 64.80 0 2758031..2758351 - 106 39935494 - RPA2428 - hypothetical protein 2414 68.71 +1 2758475..2759158 - 227 39935495 aat RPA2429 - leucyl/phenylalanyl-tRNA--protein transferase 2415 66.88 0 2759213..2760640 - 475 39935496 - RPA2430 - hypothetical protein 2416 69.49 +1 2760673..2761344 - 223 39935497 - RPA2431 - hypothetical protein 2417 67.03 0 2761477..2762568 - 363 39935498 - RPA2432 - signal transduction histidine kinase 2418 59.91 -1 2762565..2763008 - 147 39935499 - RPA2433 - response regulator receiver (CheY-like protein) 2419 64.58 0 2763005..2764537 - 510 39935500 - RPA2434 - multi-sensor signal transduction histidine kinase 2420 65.71 0 2764725..2766077 - 450 39935501 accC RPA2435 - acetyl-CoA carboxylase biotin carboxylase subunit 2421 67.88 0 2766195..2766689 - 164 39935502 accB RPA2436 - acetyl-CoA carboxylase biotin carboxyl carrier protein 2422 63.60 0 2766728..2767183 - 151 39935503 aroQ2 RPA2437 - 3-dehydroquinate dehydratase 2423 64.88 0 2767477..2768148 - 223 39935504 - RPA2438 - hypothetical protein 2424 62.65 0 2768379..2768627 + 82 39935505 - RPA2439 - hypothetical protein 2425 61.84 -1 2768965..2769918 + 317 39935506 - RPA2440 - cation efflux protein 2426 61.90 -1 2769906..2770598 + 230 39935507 - RPA2441 - TetR family transcriptional regulator 2427 63.02 0 2770683..2771450 - 255 39935508 - RPA2442 - DSBA oxidoreductase 2428 61.16 -1 2771641..2772330 - 229 39935509 - RPA2443 - antioxidant protein 2429 70.51 +1 2772482..2772871 - 129 39935510 - RPA2444 - hypothetical protein 2430 67.37 0 2773057..2774484 - 475 39935511 - RPA2445 - peptidase M48, Ste24p 2431 65.58 0 2774592..2775782 + 396 39935512 - RPA2446 - aminotransferase, class I and II 2432 71.84 +2 2775881..2776498 + 205 39935513 - RPA2447 - biotin synthase 2433 64.28 0 2776597..2777934 + 445 39935514 dctA2 RPA2448 - C4-dicarboxylic acid transport protein 2434 59.90 -1 2778036..2779055 - 339 39935515 - RPA2449 - hypothetical protein 2435 68.41 +1 2779169..2782324 - 1051 39935516 rne RPA2450 - ribonuclease, Rne/Rng family 2436 65.48 0 2782905..2784335 + 476 39935517 - RPA2451 - N-acetylmuramoyl-L-alanine amidase 2437 66.47 0 2784555..2787053 + 832 39935518 - RPA2452 - penicillin-binding protein 1A 2438 64.91 0 2787334..2788302 + 322 39935519 prfB RPA2453 - peptide chain release factor 2 2439 69.02 +1 2788309..2789202 + 297 39935520 - RPA2454 - putative dehydrogenase 2440 69.29 +1 2789329..2790699 - 456 39935521 - RPA2455 - peptidase M23B 2441 65.80 0 2790796..2791485 - 229 39935522 - RPA2456 - bacterioferritin co-migratory protein 2442 66.72 0 2791680..2795402 + 1240 39935523 - RPA2457 - hypothetical protein 2443 66.49 0 2795551..2796111 - 186 39935524 - RPA2458 - cytochrome B561 2444 67.41 0 2796332..2797549 - 405 39935525 - RPA2459 - putative permease 2445 63.01 0 2797634..2798890 - 418 39935526 tyrS RPA2460 - tyrosyl-tRNA synthetase 2446 69.66 +1 2799048..2800151 + 367 39935527 anmK RPA2461 - anhydro-N-acetylmuramic acid kinase 2447 63.73 0 2800206..2800853 - 215 39935528 - RPA2462 - hypothetical protein 2448 66.50 0 2801091..2802263 + 390 39935529 nifS1 RPA2463 - aminotransferase, class V 2449 61.61 -1 2802346..2803827 + 493 39935530 sufB RPA2464 - cysteine desulfurase activator complex subunit SufB 2450 64.43 0 2803960..2804718 + 252 39935531 sufC RPA2465 - FeS assembly ATPase SufC 2451 67.73 0 2804742..2806055 + 437 39935532 sufD RPA2466 - FeS assembly protein SufD 2452 63.06 0 2806052..2807299 + 415 39935533 sufS RPA2467 - cysteine desulfurases, SufS subfamily 2453 62.60 0 2807296..2807664 + 122 39935534 - RPA2468 - hypothetical protein 2454 62.63 0 2807693..2808088 + 131 39935535 - RPA2469 - putative lactoylglutathione lyase 2455 62.10 0 2808218..2808589 + 123 39935536 - RPA2470 - hypothetical protein 2456 67.12 0 2808744..2810708 + 654 39935537 - RPA2471 - hypothetical protein 2457 70.94 +1 2810714..2811814 + 366 39935538 - RPA2472 - hypothetical protein 2458 66.67 0 2811811..2812284 + 157 39935539 - RPA2473 - translation initiation inhibitor 2459 65.53 0 2812370..2814040 + 556 39935540 - RPA2474 - o-linked GlcNAc transferase 2460 65.83 0 2814065..2814661 + 198 39935541 - RPA2475 - TfoX, N-terminal 2461 65.07 0 2814670..2815737 - 355 39935542 - RPA2476 - putative diguanylate cyclase (GGDEF) 2462 68.71 +1 2815836..2817254 - 472 39935543 - RPA2477 - ATP-dependent RNA helicase 2463 62.09 0 2817528..2818619 - 363 39935544 - RPA2478 - AraC family transcriptional regulator 2464 62.82 0 2818822..2820561 + 579 39935545 - RPA2479 - methyl-accepting chemotaxis receptor/sensory transducer 2465 66.40 0 2820739..2822244 + 501 39935546 - RPA2480 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0