version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2343 64.58 0 2668724..2669107 - 127 39935424 - RPA2355 - nitrogenase NifB 2344 64.88 0 2669577..2670974 + 465 39935425 - RPA2356 - putative cystathionine beta-synthase 2345 66.92 0 2670976..2672148 + 390 39935426 - RPA2357 - cystathionine gamma-lyase 2346 65.14 0 2672250..2673296 - 348 39935427 - RPA2358 - 2OG-Fe(II) oxygenase family protein 2347 60.80 -1 2673702..2674571 + 289 39935428 - RPA2359 - putative periplasmic protein 2348 65.96 0 2674580..2675713 + 377 39935429 - RPA2360 - ABC transporter, ATP-binding protein 2349 67.24 0 2675667..2676368 + 233 39935430 - RPA2361 - putative ABC transporter, permease protein 2350 67.43 0 2676404..2677717 + 437 39935431 - RPA2362 - putative O-acetylhomoserine sulfhydrylase 2351 65.54 0 2677746..2679251 + 501 39935432 NifD1 RPA2363 - nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) 2352 64.78 0 2679264..2680643 + 459 39935433 - RPA2364 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein 2353 67.30 0 2680655..2681755 - 366 39935434 - RPA2365 - putative L-allo-threonine aldolase 2354 61.51 -1 2682058..2682309 + 83 39935435 - RPA2366 - hypothetical protein 2355 64.13 0 2682429..2683532 - 367 39935436 - RPA2367 - two component sensor histidine kinase, AdeS 2356 63.25 0 2683529..2683762 - 77 39935437 - RPA2368 - hypothetical protein 2357 59.42 -1 2683800..2684213 - 137 39935438 - RPA2369 - hypothetical protein 2358 64.73 0 2684210..2684467 - 85 39935439 - RPA2369a - hypothetical protein 2359 63.83 0 2684472..2684612 - 46 39935440 - RPA2370 - hypothetical protein 2360 67.49 0 2684924..2686141 + 405 39935441 mexA RPA2371 - putative RND multidrug efflux membrane fusion protein MexA precursor 2361 64.84 0 2686138..2689305 + 1055 39935442 mexB RPA2372 - RND multidrug efflux transporter MexB 2362 69.22 +1 2689314..2690843 + 509 39935443 - RPA2373 - outer membrane protein 2363 64.73 0 2690837..2691043 + 68 39935444 - RPA2374 - hypothetical protein 2364 67.48 0 2691216..2692823 + 535 39935445 - RPA2375 - hypothetical protein 2365 59.74 -1 2693666..2693968 - 100 39935446 - RPA2377 - hypothetical protein 2366 64.59 0 2694083..2696398 - 771 39935447 - RPA2378 - putative tonB-dependent receptor protein 2367 62.85 0 2696546..2697043 - 165 39935448 - RPA2379 - acetyltransferase 2368 62.37 0 2697057..2699288 - 743 39935449 - RPA2380 - tonB dependent iron siderophore receptor 2369 67.94 0 2699387..2700403 - 338 39935450 fecR4 RPA2381 - FecR, iron siderophore sensor protein 2370 62.19 0 2700496..2701254 - 252 39935451 - RPA2382 - putative iron(III) ABC transporter, ATP-binding protein 2371 66.56 0 2701251..2702201 - 316 39935452 - RPA2383 - putative iron(III) ABC transporter, permease protein 2372 67.18 0 2702194..2703171 - 325 39935453 - RPA2384 - putative ironIII transport permease protein 2373 65.01 0 2703168..2704073 - 301 39935454 - RPA2385 - putative ABC transporter, periplasmic Fe+3 siderophore binding protein 2374 62.96 0 2704064..2704981 - 305 39935455 - RPA2386 - hypothetical protein 2375 61.56 -1 2704981..2706291 - 436 39935456 - RPA2387 - hypothetical protein 2376 65.01 0 2706288..2707556 - 422 39935457 - RPA2388 - acyl-CoA synthetase 2377 64.54 0 2707553..2709241 - 562 39935458 - RPA2389 - rhizobactin siderophore biosynthesis protein RhsF 2378 62.96 0 2709270..2711051 - 593 39935459 - RPA2390 - rhizobactin siderophore biosynthesis protein rhbC 2379 61.49 -1 2711220..2711837 + 205 39935460 - RPA2391 - RNA polymerase ECF-type sigma factor, FecI 2380 64.04 0 2713351..2714226 + 291 39935461 prpC RPA2394 - putative 2-methylcitrate synthase 2381 65.58 0 2714237..2715154 + 305 39935462 prpB RPA2395 - putative carboxyphosphonoenolpyruvate phosphonomutase 2382 62.50 0 2715184..2715783 + 199 39935463 - RPA2396 - hypothetical protein 2383 63.29 0 2716133..2718499 + 788 39935464 metE RPA2397 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2384 60.69 -1 2719364..2721757 + 797 39935465 - RPA2398 - iron siderophore uptake receptor family protein 2385 63.36 0 2721766..2725668 + 1300 39935466 cobN RPA2399 - cobaltochelatase 2386 60.51 -1 2725671..2726141 + 156 39935467 - RPA2400 - hypothetical protein 2387 57.44 -2 2726141..2726476 + 111 39935468 - RPA2401 - hypothetical protein 2388 58.76 -2 2726837..2727190 + 117 39935469 - RPA2402 - hypothetical protein 2389 69.11 +1 2727725..2728216 + 163 39935470 - RPA2403 - iron-chelator utilization protein 2390 65.17 0 2728872..2729876 + 334 39935471 - RPA2404 - AraC family transcriptional regulator 2391 63.80 0 2729949..2730821 + 290 39935472 draT2 RPA2405 - NAD+ ADP-ribosyltransferase 2392 66.89 0 2730833..2731723 + 296 39935473 draG RPA2406 - ADP-ribosyl-(dinitrogen reductase) hydrolase 2393 59.52 -1 2732218..2732553 - 111 39935474 - RPA2407 - hypothetical protein 2394 65.11 0 2732949..2734106 + 385 39935475 amiC1 RPA2408 - putative aliphatic amidase expression-regulating protein, AmiC 2395 68.47 +1 2734103..2734768 + 221 39935476 - RPA2409 - AmiR antitermination protein 2396 61.90 -1 2734780..2736018 + 412 39935477 - RPA2410 - putative urea/short-chain amide transport system substrate-binding protein 2397 65.29 0 2736137..2737009 + 290 39935478 - RPA2411 - putative permease of ABC transporter 2398 64.51 0 2737021..2738085 + 354 39935479 - RPA2412 - ABC transporter permease 2399 64.32 0 2738085..2738807 + 240 39935480 - RPA2413 - putative urea/short-chain amide transport system ATP-binding protein 2400 66.25 0 2738800..2739513 + 237 39935481 - RPA2414 - putative urea/short-chain amide transport system ATP-binding protein 2401 63.03 0 2739539..2740528 + 329 39935482 - RPA2415 - acetamidase/formamidase 2402 65.46 0 2740543..2742282 + 579 39935483 - RPA2416 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2403 66.40 0 2742298..2743059 + 253 39935484 - RPA2417 - putative 3-ketoacyl-CoA reductase 2404 64.19 0 2745582..2747036 + 484 39935485 - RPA2419 - outer membrane protein, porin 2405 66.62 0 2747337..2749574 - 745 39935486 - RPA2420 - lytic transglycosylase, catalytic 2406 66.67 0 2750691..2751101 + 136 39935487 - RPA2421 - NADH dehydrogenase 2407 67.83 0 2751142..2751831 - 229 39935488 - RPA2422 - hypothetical protein 2408 69.12 +1 2751955..2752893 + 312 39935489 - RPA2423 - AraC family transcriptional regulator 2409 67.44 0 2752915..2754342 - 475 39935490 - RPA2424 - agarase 2410 68.36 0 2754356..2755300 - 314 39935491 - RPA2425 - putative lipase/esterase 2411 71.31 +1 2755533..2756522 + 329 39935492 - RPA2426 - hypothetical protein 2412 62.57 0 2756723..2757967 - 414 39935493 - RPA2427 - serine protease 2413 64.80 0 2758031..2758351 - 106 39935494 - RPA2428 - hypothetical protein 2414 68.71 +1 2758475..2759158 - 227 39935495 aat RPA2429 - leucyl/phenylalanyl-tRNA--protein transferase 2415 66.88 0 2759213..2760640 - 475 39935496 - RPA2430 - hypothetical protein 2416 69.49 +1 2760673..2761344 - 223 39935497 - RPA2431 - hypothetical protein 2417 67.03 0 2761477..2762568 - 363 39935498 - RPA2432 - signal transduction histidine kinase 2418 59.91 -1 2762565..2763008 - 147 39935499 - RPA2433 - response regulator receiver (CheY-like protein) 2419 64.58 0 2763005..2764537 - 510 39935500 - RPA2434 - multi-sensor signal transduction histidine kinase 2420 65.71 0 2764725..2766077 - 450 39935501 accC RPA2435 - acetyl-CoA carboxylase biotin carboxylase subunit 2421 67.88 0 2766195..2766689 - 164 39935502 accB RPA2436 - acetyl-CoA carboxylase biotin carboxyl carrier protein 2422 63.60 0 2766728..2767183 - 151 39935503 aroQ2 RPA2437 - 3-dehydroquinate dehydratase 2423 64.88 0 2767477..2768148 - 223 39935504 - RPA2438 - hypothetical protein 2424 62.65 0 2768379..2768627 + 82 39935505 - RPA2439 - hypothetical protein 2425 61.84 -1 2768965..2769918 + 317 39935506 - RPA2440 - cation efflux protein 2426 61.90 -1 2769906..2770598 + 230 39935507 - RPA2441 - TetR family transcriptional regulator 2427 63.02 0 2770683..2771450 - 255 39935508 - RPA2442 - DSBA oxidoreductase 2428 61.16 -1 2771641..2772330 - 229 39935509 - RPA2443 - antioxidant protein 2429 70.51 +1 2772482..2772871 - 129 39935510 - RPA2444 - hypothetical protein 2430 67.37 0 2773057..2774484 - 475 39935511 - RPA2445 - peptidase M48, Ste24p 2431 65.58 0 2774592..2775782 + 396 39935512 - RPA2446 - aminotransferase, class I and II 2432 71.84 +2 2775881..2776498 + 205 39935513 - RPA2447 - biotin synthase 2433 64.28 0 2776597..2777934 + 445 39935514 dctA2 RPA2448 - C4-dicarboxylic acid transport protein 2434 59.90 -1 2778036..2779055 - 339 39935515 - RPA2449 - hypothetical protein 2435 68.41 +1 2779169..2782324 - 1051 39935516 rne RPA2450 - ribonuclease, Rne/Rng family 2436 65.48 0 2782905..2784335 + 476 39935517 - RPA2451 - N-acetylmuramoyl-L-alanine amidase 2437 66.47 0 2784555..2787053 + 832 39935518 - RPA2452 - penicillin-binding protein 1A 2438 64.91 0 2787334..2788302 + 322 39935519 prfB RPA2453 - peptide chain release factor 2 2439 69.02 +1 2788309..2789202 + 297 39935520 - RPA2454 - putative dehydrogenase 2440 69.29 +1 2789329..2790699 - 456 39935521 - RPA2455 - peptidase M23B 2441 65.80 0 2790796..2791485 - 229 39935522 - RPA2456 - bacterioferritin co-migratory protein 2442 66.72 0 2791680..2795402 + 1240 39935523 - RPA2457 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0