version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2310 64.77 0 2630453..2631346 + 297 39935391 - RPA2322 - LysR family transcriptional regulator 2311 65.18 0 2631514..2632788 + 424 39935392 goaT RPA2323 - 4-aminobutyrate aminotransferase 2312 67.63 0 2632826..2634277 + 483 39935393 gabD2 RPA2324 - succinate-semialdehyde dehydrogenase 2313 65.59 0 2634327..2635625 + 432 39935394 - RPA2325 - acetylornithine deacetylase 2314 68.36 0 2635625..2637214 + 529 39935395 - RPA2326 - hypothetical protein 2315 62.20 0 2637293..2638882 + 529 39935396 - RPA2327 - putative ABC transporter oligopeptide-binding protein 2316 65.00 0 2638879..2639901 + 340 39935397 - RPA2328 - putative ABC transporter permease protein 2317 66.19 0 2639914..2640753 + 279 39935398 - RPA2329 - putative ABC transporter permease protein 2318 68.47 +1 2640750..2642408 + 552 39935399 - RPA2330 - putative ABC transporter ATP-binding protein 2319 67.43 0 2642483..2644060 + 525 39935400 ggt2 RPA2331 - gamma-glutamyltranspeptidase 2320 63.81 0 2644354..2645508 + 384 39935401 - RPA2332 - nuclease 2321 66.81 0 2645744..2647840 - 698 39935402 ctpC RPA2333 - putative cation transport ATPase, copper transporter 2322 61.36 -1 2647837..2648175 - 112 39935403 - RPA2334 - hypothetical protein 2323 69.30 +1 2648168..2648509 - 113 39935404 - RPA2335 - hypothetical protein 2324 63.89 0 2648496..2648819 - 107 39935405 - RPA2336 - hypothetical protein 2325 66.37 0 2648837..2649169 - 110 39935406 - RPA2337 - hypothetical protein 2326 67.47 0 2649177..2649677 - 166 39935407 - RPA2338 - hypothetical protein 2327 61.59 -1 2650175..2650666 + 163 39935408 - RPA2339 - FUR family transcriptional regulator 2328 63.39 0 2650793..2652166 - 457 39935409 - RPA2340 - hypothetical protein 2329 63.21 0 2652218..2653897 - 559 39935410 ilvD RPA2341 - putative dihydroxy-acid dehydratase 2330 63.61 0 2653962..2655269 - 435 39935411 - RPA2342 - putative transmembrane transport protein 2331 58.26 -2 2655678..2656355 + 225 39935412 - RPA2343 - GntR family transcriptional regulator 2332 71.34 +1 2656394..2657014 - 206 39935413 - RPA2344 - hypothetical protein 2333 69.34 +1 2657015..2658025 - 336 39935414 - RPA2345 - hypothetical protein 2334 69.13 +1 2658270..2659448 - 392 39935415 - RPA2346 - hypothetical protein 2335 67.03 0 2659490..2660881 - 463 39935416 - RPA2347 - vanadium nitrogenase associated protein N 2336 66.21 0 2660881..2662416 - 511 39935417 - RPA2348 - nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) 2337 67.76 0 2662641..2663834 - 397 39935418 metY RPA2349 - putative homocysteine synthase 2338 66.05 0 2664108..2665409 + 433 39935419 metC RPA2350 - putative O-acetylhomoserine sulfhydrylase 2339 60.53 -1 2665574..2666062 - 162 39935420 - RPA2351 - AsnC family transcriptional regulator 2340 66.87 0 2666343..2666840 - 165 39935421 - RPA2352 - hypothetical protein 2341 65.41 0 2666883..2667758 - 291 39935422 nifH1 RPA2353 - putative nitrogenase NifH subunit 2342 67.21 0 2667804..2668727 - 307 39935423 nifB2 RPA2354 - putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifB 2343 64.58 0 2668724..2669107 - 127 39935424 - RPA2355 - nitrogenase NifB 2344 64.88 0 2669577..2670974 + 465 39935425 - RPA2356 - putative cystathionine beta-synthase 2345 66.92 0 2670976..2672148 + 390 39935426 - RPA2357 - cystathionine gamma-lyase 2346 65.14 0 2672250..2673296 - 348 39935427 - RPA2358 - 2OG-Fe(II) oxygenase family protein 2347 60.80 -1 2673702..2674571 + 289 39935428 - RPA2359 - putative periplasmic protein 2348 65.96 0 2674580..2675713 + 377 39935429 - RPA2360 - ABC transporter, ATP-binding protein 2349 67.24 0 2675667..2676368 + 233 39935430 - RPA2361 - putative ABC transporter, permease protein 2350 67.43 0 2676404..2677717 + 437 39935431 - RPA2362 - putative O-acetylhomoserine sulfhydrylase 2351 65.54 0 2677746..2679251 + 501 39935432 NifD1 RPA2363 - nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase) 2352 64.78 0 2679264..2680643 + 459 39935433 - RPA2364 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifE-like protein 2353 67.30 0 2680655..2681755 - 366 39935434 - RPA2365 - putative L-allo-threonine aldolase 2354 61.51 -1 2682058..2682309 + 83 39935435 - RPA2366 - hypothetical protein 2355 64.13 0 2682429..2683532 - 367 39935436 - RPA2367 - two component sensor histidine kinase, AdeS 2356 63.25 0 2683529..2683762 - 77 39935437 - RPA2368 - hypothetical protein 2357 59.42 -1 2683800..2684213 - 137 39935438 - RPA2369 - hypothetical protein 2358 64.73 0 2684210..2684467 - 85 39935439 - RPA2369a - hypothetical protein 2359 63.83 0 2684472..2684612 - 46 39935440 - RPA2370 - hypothetical protein 2360 67.49 0 2684924..2686141 + 405 39935441 mexA RPA2371 - putative RND multidrug efflux membrane fusion protein MexA precursor 2361 64.84 0 2686138..2689305 + 1055 39935442 mexB RPA2372 - RND multidrug efflux transporter MexB 2362 69.22 +1 2689314..2690843 + 509 39935443 - RPA2373 - outer membrane protein 2363 64.73 0 2690837..2691043 + 68 39935444 - RPA2374 - hypothetical protein 2364 67.48 0 2691216..2692823 + 535 39935445 - RPA2375 - hypothetical protein 2365 59.74 -1 2693666..2693968 - 100 39935446 - RPA2377 - hypothetical protein 2366 64.59 0 2694083..2696398 - 771 39935447 - RPA2378 - putative tonB-dependent receptor protein 2367 62.85 0 2696546..2697043 - 165 39935448 - RPA2379 - acetyltransferase 2368 62.37 0 2697057..2699288 - 743 39935449 - RPA2380 - tonB dependent iron siderophore receptor 2369 67.94 0 2699387..2700403 - 338 39935450 fecR4 RPA2381 - FecR, iron siderophore sensor protein 2370 62.19 0 2700496..2701254 - 252 39935451 - RPA2382 - putative iron(III) ABC transporter, ATP-binding protein 2371 66.56 0 2701251..2702201 - 316 39935452 - RPA2383 - putative iron(III) ABC transporter, permease protein 2372 67.18 0 2702194..2703171 - 325 39935453 - RPA2384 - putative ironIII transport permease protein 2373 65.01 0 2703168..2704073 - 301 39935454 - RPA2385 - putative ABC transporter, periplasmic Fe+3 siderophore binding protein 2374 62.96 0 2704064..2704981 - 305 39935455 - RPA2386 - hypothetical protein 2375 61.56 -1 2704981..2706291 - 436 39935456 - RPA2387 - hypothetical protein 2376 65.01 0 2706288..2707556 - 422 39935457 - RPA2388 - acyl-CoA synthetase 2377 64.54 0 2707553..2709241 - 562 39935458 - RPA2389 - rhizobactin siderophore biosynthesis protein RhsF 2378 62.96 0 2709270..2711051 - 593 39935459 - RPA2390 - rhizobactin siderophore biosynthesis protein rhbC 2379 61.49 -1 2711220..2711837 + 205 39935460 - RPA2391 - RNA polymerase ECF-type sigma factor, FecI 2380 64.04 0 2713351..2714226 + 291 39935461 prpC RPA2394 - putative 2-methylcitrate synthase 2381 65.58 0 2714237..2715154 + 305 39935462 prpB RPA2395 - putative carboxyphosphonoenolpyruvate phosphonomutase 2382 62.50 0 2715184..2715783 + 199 39935463 - RPA2396 - hypothetical protein 2383 63.29 0 2716133..2718499 + 788 39935464 metE RPA2397 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2384 60.69 -1 2719364..2721757 + 797 39935465 - RPA2398 - iron siderophore uptake receptor family protein 2385 63.36 0 2721766..2725668 + 1300 39935466 cobN RPA2399 - cobaltochelatase 2386 60.51 -1 2725671..2726141 + 156 39935467 - RPA2400 - hypothetical protein 2387 57.44 -2 2726141..2726476 + 111 39935468 - RPA2401 - hypothetical protein 2388 58.76 -2 2726837..2727190 + 117 39935469 - RPA2402 - hypothetical protein 2389 69.11 +1 2727725..2728216 + 163 39935470 - RPA2403 - iron-chelator utilization protein 2390 65.17 0 2728872..2729876 + 334 39935471 - RPA2404 - AraC family transcriptional regulator 2391 63.80 0 2729949..2730821 + 290 39935472 draT2 RPA2405 - NAD+ ADP-ribosyltransferase 2392 66.89 0 2730833..2731723 + 296 39935473 draG RPA2406 - ADP-ribosyl-(dinitrogen reductase) hydrolase 2393 59.52 -1 2732218..2732553 - 111 39935474 - RPA2407 - hypothetical protein 2394 65.11 0 2732949..2734106 + 385 39935475 amiC1 RPA2408 - putative aliphatic amidase expression-regulating protein, AmiC 2395 68.47 +1 2734103..2734768 + 221 39935476 - RPA2409 - AmiR antitermination protein 2396 61.90 -1 2734780..2736018 + 412 39935477 - RPA2410 - putative urea/short-chain amide transport system substrate-binding protein 2397 65.29 0 2736137..2737009 + 290 39935478 - RPA2411 - putative permease of ABC transporter 2398 64.51 0 2737021..2738085 + 354 39935479 - RPA2412 - ABC transporter permease 2399 64.32 0 2738085..2738807 + 240 39935480 - RPA2413 - putative urea/short-chain amide transport system ATP-binding protein 2400 66.25 0 2738800..2739513 + 237 39935481 - RPA2414 - putative urea/short-chain amide transport system ATP-binding protein 2401 63.03 0 2739539..2740528 + 329 39935482 - RPA2415 - acetamidase/formamidase 2402 65.46 0 2740543..2742282 + 579 39935483 - RPA2416 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2403 66.40 0 2742298..2743059 + 253 39935484 - RPA2417 - putative 3-ketoacyl-CoA reductase 2404 64.19 0 2745582..2747036 + 484 39935485 - RPA2419 - outer membrane protein, porin 2405 66.62 0 2747337..2749574 - 745 39935486 - RPA2420 - lytic transglycosylase, catalytic 2406 66.67 0 2750691..2751101 + 136 39935487 - RPA2421 - NADH dehydrogenase 2407 67.83 0 2751142..2751831 - 229 39935488 - RPA2422 - hypothetical protein 2408 69.12 +1 2751955..2752893 + 312 39935489 - RPA2423 - AraC family transcriptional regulator 2409 67.44 0 2752915..2754342 - 475 39935490 - RPA2424 - agarase 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0