version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2116 66.44 0 2391220..2391657 + 145 39935197 exbD3 RPA2128 - biopolymer transport protein ExbD/TolR 2117 72.61 +2 2391654..2392511 + 285 39935198 - RPA2129 - energy transducer TonB, C-terminal region 2118 66.54 0 2393564..2394370 - 268 39935199 - RPA2130 - hypothetical protein 2119 65.56 0 2394921..2396003 + 360 39935200 - RPA2131 - hypothetical protein 2120 67.32 0 2396132..2397517 + 461 39935201 - RPA2132 - hypothetical protein 2121 64.77 0 2397522..2398313 + 263 39935202 - RPA2133 - hypothetical protein 2122 64.64 0 2398474..2398917 + 147 39935203 - RPA2134 - hypothetical protein 2123 64.88 0 2398973..2401096 - 707 39935204 - RPA2135 - sensor histidine kinase 2124 65.08 0 2401317..2401631 + 104 39935205 - RPA2136 - cytochrome C precursor 2125 64.04 0 2401734..2402873 + 379 39935206 - RPA2137 - acyl-CoA dehydrogenase 2126 64.42 0 2403023..2404177 + 384 39935207 - RPA2138 - putative acyl-CoA dehydrogenase 2127 64.52 0 2404371..2405069 + 232 39935208 - RPA2139 - glutathione S-transferase 2128 67.52 0 2405234..2406058 + 274 39935209 - RPA2140 - AraC family transcriptional regulator 2129 64.36 0 2406179..2407045 + 288 39935210 - RPA2141 - hypothetical protein 2130 64.86 0 2407213..2408817 + 534 39935211 - RPA2142 - putative fatty-acid--CoA ligase 2131 66.54 0 2409057..2410679 + 540 39935212 - RPA2143 - propionyl-CoA carboxylase 2132 67.57 0 2410676..2412658 + 660 39935213 - RPA2144 - carbamoyl-phosphate synthase L chain, ATP-binding 2133 64.10 0 2412778..2413557 + 259 39935214 - RPA2145 - enoyl-CoA hydratase 2134 66.34 0 2413733..2415271 + 512 39935215 - RPA2146 - putative long-chain-fatty-acid--CoA ligase 2135 68.82 +1 2415426..2416820 + 464 39935216 - RPA2147 - hypothetical protein 2136 64.07 0 2416916..2418184 - 422 39935217 - RPA2148 - beta-lactamase 2137 65.26 0 2418328..2419320 + 330 39935218 - RPA2149 - putative hydroxyquinol 1,2-dioxygenase 2138 67.87 0 2419351..2420184 + 277 39935219 - RPA2150 - putative oxidoreductase 2139 66.89 0 2420403..2421317 + 304 39935220 - RPA2151 - DMT family permease 2140 64.98 0 2421412..2423541 + 709 39935221 - RPA2152 - diguanylate cyclase/phosphodiesterase 2141 65.55 0 2423788..2425218 + 476 39935222 - RPA2153 - aldehyde dehydrogenase 2142 61.22 -1 2425291..2426538 + 415 39935223 - RPA2154 - putative acyltransferase 2143 67.49 0 2426865..2428571 + 568 39935224 ilvD3 RPA2155 - dihydroxy-acid dehydratase 2144 62.01 -1 2428576..2428854 - 92 39935225 - RPA2156 - hypothetical protein 2145 65.33 0 2429253..2430449 + 398 39935226 - RPA2157 - hypothetical protein 2146 67.58 0 2430585..2430914 + 109 39935227 - RPA2158 - hypothetical protein 2147 69.52 +1 2431025..2431339 - 104 39935228 - RPA2159 - hypothetical protein 2148 65.60 0 2431465..2432214 - 249 39935229 - RPA2160 - short-chain dehydrogenase/reductase SDR 2149 64.13 0 2432327..2432641 + 104 39935230 - RPA2161 - ArsR family transcriptional regulator 2150 67.27 0 2433296..2436136 + 946 39935231 - RPA2162 - serine protease/outer membrane autotransporter 2151 67.54 0 2436196..2436882 - 228 39935232 - RPA2163 - SecC motif-containing protein 2152 65.69 0 2437219..2438862 - 547 39935233 groEL RPA2164 - chaperonin GroEL 2153 61.27 -1 2439028..2439342 - 104 39935234 groES RPA2165 - co-chaperonin GroES 2154 60.35 -1 2439785..2440069 + 94 39935235 - RPA2166 - hypothetical protein 2155 67.02 0 2440210..2441895 - 561 39935236 - RPA2167 - hypothetical protein 2156 66.59 0 2442142..2443392 - 416 39935237 - RPA2168 - putative H+/nucleoside symporter 2157 69.11 +1 2443567..2444673 + 368 39935238 rlp1 RPA2169 - ribulose-bisphosphate carboxylase-like protein; rubisco-like protein 2158 65.66 0 2444663..2445160 + 165 39935239 - RPA2170 - hypothetical protein 2159 63.43 0 2445677..2446480 + 267 39935240 - RPA2171 - hypothetical protein 2160 69.17 +1 2446500..2447258 - 252 39935241 - RPA2172 - short-chain dehydrogenase/reductase SDR 2161 66.27 0 2447291..2447791 - 166 39935242 - RPA2173 - GCN5-related N-acetyltransferase 2162 63.72 0 2447810..2448556 - 248 39935243 - RPA2174 - putative proteasome-type protease 2163 69.08 +1 2448770..2449597 - 275 39935244 - RPA2175 - transglutaminase-like domain-containing protein 2164 63.39 0 2449647..2450591 - 314 39935245 - RPA2176 - hypothetical protein 2165 64.90 0 2450743..2452161 - 472 39935246 - RPA2177 - hypothetical protein 2166 65.18 0 2452385..2453122 + 245 39935247 - RPA2178 - molybdopterin binding domain 2167 65.41 0 2453243..2453797 + 184 39935248 - RPA2179 - xanthine-guanine phosphoribosyltransferase 2168 64.59 0 2454102..2454776 + 224 39935249 - RPA2180 - hypothetical protein 2169 64.13 0 2454971..2455993 - 340 39935250 - RPA2181 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2170 64.78 0 2456070..2456864 + 264 39935251 - RPA2182 - putative glutathione S-transferase 2171 60.55 -1 2457284..2457904 + 206 39935252 - RPA2183 - DSBA oxidoreductase 2172 68.00 0 2457904..2458878 + 324 39935253 - RPA2184 - putative oxidoreductase 2173 61.97 -1 2458970..2459437 + 155 39935254 - RPA2185 - MaoC-like dehydratase 2174 67.10 0 2459456..2460373 + 305 39935255 - RPA2186 - short-chain dehydrogenase/reductase SDR 2175 69.17 +1 2460577..2461812 + 411 39935256 - RPA2187 - hypothetical protein 2176 67.89 0 2461819..2462145 - 108 39935257 - RPA2188 - hypothetical protein 2177 69.10 +1 2462142..2462798 - 218 39935258 - RPA2189 - TetR family transcriptional regulator 2178 68.59 +1 2462902..2464719 - 605 39935259 - RPA2190 - ABC transporter ATPase 2179 67.92 0 2464730..2465206 - 158 39935260 - RPA2191 - hypothetical protein 2180 67.42 0 2465309..2466109 + 266 39935261 - RPA2192 - hypothetical protein 2181 62.72 0 2466304..2467518 + 404 39935262 - RPA2193 - putative ABC transporter, perplasmic binding protein, branched chain amino acids 2182 67.27 0 2467751..2470255 - 834 39935263 - RPA2194 - carbon-monoxide dehydrogenase large subunit 2183 67.65 0 2470320..2471435 + 371 39935264 - RPA2195 - Ppx/GppA phosphatase 2184 68.49 +1 2471462..2472175 - 237 39935265 - RPA2196 - hypothetical protein 2185 66.25 0 2472235..2472948 + 237 39935266 - RPA2197 - ribosomal RNA methyltransferase RrmJ/FtsJ 2186 65.21 0 2473309..2474886 - 525 39935267 - RPA2198 - multidrug efflux protein 2187 65.86 0 2474976..2475224 + 82 39935268 - RPA2199 - hypothetical protein 2188 67.54 0 2475578..2477074 + 498 39935269 guaB RPA2200 - inositol-5-monophosphate dehydrogenase 2189 66.96 0 2477373..2478398 + 341 39935270 - RPA2201 - quinone oxidoreductase 2190 72.20 +2 2478589..2479890 + 433 39935271 - RPA2202 - SUN-family protein, putative RNA methyltransferase 2191 66.17 0 2480182..2481804 + 540 39935272 guaA RPA2203 - bifunctional GMP synthase/glutamine amidotransferase protein 2192 60.78 -1 2482087..2483343 + 418 39935273 - RPA2204 - integrase 2193 62.07 0 2483315..2483662 - 115 39935274 - RPA2205 - hypothetical protein 2194 60.63 -1 2483746..2484126 - 126 39935275 - RPA2206 - hypothetical protein 2195 61.31 -1 2484202..2485770 + 522 39935276 - RPA2207 - putative recombinase 2196 63.28 0 2485767..2486651 + 294 39935277 parB2 RPA2208 - ParB-like partioning protein 2197 61.28 -1 2486653..2487543 + 296 39935278 - RPA2209 - ParB-like nuclease 2198 65.44 0 2487834..2489702 + 622 39935279 - RPA2210 - hypothetical protein 2199 62.26 0 2489714..2492842 - 1042 39935280 - RPA2211 - DEAD/DEAH box helicase:helicase, C-terminal 2200 63.22 0 2492832..2494688 - 618 39935281 - RPA2212 - hypothetical protein 2201 63.04 0 2494678..2495862 - 394 39935282 - RPA2213 - hypothetical protein 2202 62.00 -1 2495915..2499256 - 1113 39935283 - RPA2214 - helicase 2203 65.02 0 2499276..2502677 - 1133 39935284 - RPA2215 - ATP-dependent exodeoxyribonuclease (subunit A) 2204 65.95 0 2502677..2505340 - 887 39935285 - RPA2216 - hypothetical protein 2205 60.00 -1 2505626..2506510 + 294 39935286 - RPA2217 - hypothetical protein 2206 62.75 0 2506544..2510062 + 1172 39935287 - RPA2218 - ATP-dependent RNA helicase 2207 61.20 -1 2510059..2514300 + 1413 39935288 - RPA2219 - ATPase 2208 55.63 -2 2514284..2517118 + 944 39935289 - RPA2220 - hypothetical protein 2209 62.36 0 2517132..2520431 + 1099 39935290 - RPA2221 - hypothetical protein 2210 65.08 0 2520519..2521466 + 315 39935291 - RPA2222 - LysR family transcriptional regulator 2211 62.25 0 2521433..2521681 - 82 39935292 - RPA2223 - hypothetical protein 2212 67.71 0 2521686..2522930 - 414 39935293 trbI1 RPA2224 - type IV secretion system subunit TrbI 2213 64.67 0 2522927..2523928 - 333 39935294 trbG1 RPA2225 - conjugal transfer protein trbG 2214 64.34 0 2523928..2524614 - 228 39935295 trbF1 RPA2226 - putative conjugal transfer protein trbF 2215 64.97 0 2524611..2525909 - 432 39935296 trbL RPA2227 - putative conjugal transfer protein trbL 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0