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Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1901 67.32 0 2145051..2146418 + 455 39934982 - RPA1913 - hypothetical protein 1902 70.08 +1 2146542..2147303 + 253 39934983 - RPA1914 - putative glycohydrolase 1903 67.41 0 2147990..2148664 + 224 39934984 feuP RPA1915 - two-component transcriptional regulator FeuP 1904 68.25 0 2148680..2150071 + 463 39934985 feuQ RPA1916 - periplasmic sensor signal transduction histidine kinase 1905 69.25 +1 2150168..2150632 + 154 39934986 lipA1 RPA1917 - LipA a lipoprotein 1906 66.39 0 2150801..2152258 + 485 39934987 - RPA1918 - hypothetical protein 1907 70.91 +1 2152421..2153527 + 368 39934988 cycH RPA1919 - cytochrome c-type biogenesis protein cycH 1908 66.27 0 2153641..2154144 + 167 39934989 cycJ RPA1920 - cytochrome c-type biogenesis protein CcmE 1909 67.37 0 2154141..2156123 + 660 39934990 cycK RPA1921 - cytochrome c-type biogenesis protein CcmF 1910 69.41 +1 2156125..2156634 + 169 39934991 cycL RPA1922 - cytochrome C biogenesis protein 1911 62.46 0 2156945..2157967 - 340 39934992 amiF RPA1923 - formamidase 1912 69.32 +1 2158087..2158764 - 225 39934993 - RPA1924 - cobalamin synthesis protein/P47K 1913 63.60 0 2159007..2160473 - 488 39934994 - RPA1925 - putative transmembrane protein 1914 62.79 0 2160548..2161399 + 283 39934995 - RPA1926 - XRE family transcriptional regulator 1915 63.93 0 2161591..2162175 - 194 39934996 - RPA1927 - hypothetical protein 1916 65.46 0 2162133..2163041 - 302 39934997 - RPA1928 - ferredoxin 1917 67.37 0 2163410..2164981 + 523 39934998 - RPA1929 - htrA-like serine protease 1918 64.33 0 2165214..2165939 + 241 39934999 - RPA1930 - two-component transcriptional regulator 1919 65.74 0 2166162..2167460 + 432 39935000 - RPA1931 - methyl-accepting chemotaxis receptor/sensory transducer 1920 67.08 0 2167673..2169121 + 482 39935001 - RPA1932 - periplasmic sensor signal transduction histidine kinase 1921 67.41 0 2169118..2172090 + 990 39935002 glnE RPA1933 - glutamate-ammonia-ligase adenylyltransferase 1922 63.10 0 2172149..2172400 - 83 39935003 - RPA1934 - hypothetical protein 1923 70.19 +1 2172501..2173523 - 340 39935004 - RPA1935 - AraC family transcriptional regulator 1924 66.41 0 2173925..2177401 + 1158 39935005 - RPA1936 - serine protease/outer membrane autotransporter 1925 66.77 0 2177757..2178716 + 319 39935006 - RPA1937 - transposase 1926 64.19 0 2178903..2181242 - 779 39935007 - RPA1938 - sensor histidine kinase, pleC 1927 67.25 0 2181428..2182810 - 460 39935008 - RPA1939 - cation diffusion facilitator family transporter 1928 67.91 0 2182941..2183909 - 322 39935009 - RPA1940 - putative quinone oxidoreductase 1929 66.17 0 2183952..2184950 - 332 39935010 - RPA1941 - 2-nitropropane dioxygenase 1930 62.98 0 2185188..2185973 - 261 39935011 - RPA1942 - putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1931 65.06 0 2186129..2187121 - 330 39935012 panE RPA1943 - 2-dehydropantoate 2-reductase 1932 64.35 0 2187210..2188550 - 446 39935013 oxlT RPA1944 - oxalate/formate antiporter 1933 65.69 0 2188671..2189996 - 441 39935014 - RPA1945 - formyl-coenzyme A transferase 1934 65.64 0 2190065..2191039 - 324 39935015 - RPA1946 - GntR family transcriptional regulator 1935 66.56 0 2191349..2192275 + 308 39935016 pqqB RPA1947 - pyrroloquinoline quinone biosynthesis protein PqqB 1936 64.71 0 2192272..2193036 + 254 39935017 pqqC RPA1948 - pyrroloquinoline quinone biosynthesis protein PqqC 1937 69.26 +1 2193041..2193349 + 102 39935018 pqqD RPA1949 - coenzyme PQQ synthesis D 1938 67.46 0 2193391..2194524 + 377 39935019 pqqE RPA1950 - pyrroloquinoline quinone biosynthesis protein PqqE 1939 67.34 0 2194774..2195664 - 296 39935020 - RPA1951 - FusE-MFP/HlyD family membrane protein 1940 58.57 -2 2195661..2195870 - 69 39935021 - RPA1952 - hypothetical protein 1941 68.41 +1 2195870..2197882 - 670 39935022 - RPA1953 - FusB/FusC fusaric acid resistance pump 1942 66.67 0 2198048..2198734 + 228 39935023 - RPA1954 - TetR family transcriptional regulator 1943 64.05 0 2198871..2199980 - 369 39935024 - RPA1955 - glutathione dependent formaldehyde dehydrogenase 1944 69.36 +1 2200078..2201601 - 507 39935025 - RPA1956 - ATPase 1945 67.06 0 2201728..2202744 - 338 39935026 - RPA1957 - alkanal monooxygenase (LuxA-like protein) 1946 62.34 0 2202856..2203479 - 207 39935027 - RPA1958 - TetR family transcriptional regulator 1947 67.77 0 2203559..2204647 + 362 39935028 - RPA1959 - putative RND efflux membrane protein 1948 68.16 0 2204644..2205717 + 357 39935029 - RPA1960 - putative RND efflux membrane protein 1949 64.90 0 2205714..2208764 + 1016 39935030 - RPA1961 - RND efflux transporter 1950 65.96 0 2208766..2209047 + 93 39935031 - RPA1962 - hypothetical protein 1951 64.32 0 2209076..2210269 + 397 39935032 - RPA1963 - patatin-like phospholipase domain-containing protein 1952 65.05 0 2210328..2210885 + 185 39935033 - RPA1964 - hypothetical protein 1953 64.15 0 2210911..2212899 - 662 39935034 - RPA1965 - putative adenylate/guanylate cyclase 1954 65.40 0 2213166..2213798 - 210 39935035 - RPA1966 - TetR family transcriptional regulator 1955 69.27 +1 2213962..2215077 + 371 39935036 - RPA1967 - putative component of multidrug efflux system 1956 66.67 0 2215077..2218232 + 1051 39935037 - RPA1968 - RND efflux transporter 1957 66.67 0 2218343..2219338 + 331 39935038 yjbN RPA1969 - tRNA-dihydrouridine synthase A 1958 67.97 0 2219352..2219888 - 178 39935039 - RPA1970 - hypothetical protein 1959 67.03 0 2219911..2220183 - 90 39935040 - RPA1971 - hypothetical protein 1960 66.92 0 2220180..2221778 - 532 39935041 - RPA1972 - periplasmic sensor signal transduction histidine kinase 1961 66.21 0 2221944..2222813 - 289 39935042 - RPA1973 - 3-hydroxyisobutyrate dehydrogenase 1962 67.12 0 2223122..2224234 + 370 39935043 - RPA1974 - ATP/GTP-binding-like protein 1963 62.91 0 2224485..2225576 + 363 39935044 - RPA1975 - twin-arginine translocation pathway signal 1964 64.66 0 2225766..2227607 - 613 39935045 - RPA1976 - TRAP dicarboxylate family transporter DctM subunit 1965 58.96 -1 2227645..2228241 - 198 39935046 - RPA1977 - TRAP dicarboxylate family transporter DctQ subunit 1966 66.57 0 2228415..2229449 - 344 39935047 moaA RPA1978 - molybdenum cofactor biosynthesis protein A 1967 69.11 +1 2229556..2230005 - 149 39935048 - RPA1979 - hypothetical protein 1968 66.81 0 2230169..2230846 - 225 39935049 cbbZ RPA1980 - phosphoglycolate phosphatase 1969 66.09 0 2230997..2231695 + 232 39935050 cbbI RPA1981 - ribose-5-phosphate isomerase A 1970 60.93 -1 2231692..2232231 + 179 39935051 - RPA1982 - hypothetical protein 1971 65.95 0 2232249..2233634 + 461 39935052 gor RPA1983 - glutathione reductase 1972 66.67 0 2233823..2235211 + 462 39935053 aroG2 RPA1984 - phospho-2-dehydro-3-deoxyheptonate aldolase 1973 68.64 +1 2235342..2235695 + 117 39935054 - RPA1985 - diacylglycerol kinase 1974 67.46 0 2235739..2237493 + 584 39935055 nadE RPA1986 - NAD synthetase 1975 54.24 -2 2237747..2238076 - 109 39935056 - RPA1987 - hypothetical protein 1976 61.71 -1 2238302..2239309 - 335 39935057 - RPA1988 - AraC family transcriptional regulator 1977 65.44 0 2239874..2240200 + 108 39935058 - RPA1989 - hypothetical protein 1978 62.93 0 2240367..2242157 + 596 39935059 - RPA1990 - sulfatase 1979 61.86 -1 2242169..2243230 + 353 39935060 - RPA1991 - hypothetical protein 1980 59.85 -1 2243485..2243895 - 136 39935061 - RPA1992 - NtrR protein 1981 60.61 -1 2243892..2244155 - 87 39935062 - RPA1993 - virulence-associated protein 1982 66.20 0 2244336..2244761 + 141 39935063 - RPA1994 - hypothetical protein 1983 69.49 +1 2244858..2246027 - 389 39935064 - RPA1995 - hypothetical protein 1984 68.61 +1 2246213..2246521 - 102 39935065 - RPA1996 - hypothetical protein 1985 65.37 0 2246922..2248313 + 463 39935066 cysS RPA1997 - cysteinyl-tRNA synthetase 1986 62.88 0 2248843..2248974 + 43 39935067 - RPA1998 - hypothetical protein 1987 65.87 0 2248971..2249474 + 167 39935068 - RPA1999 - GCN5-related N-acetyltransferase 1988 64.29 0 2249471..2251069 + 532 39935069 leuA RPA2000 - alpha-isopropylmalate/homocitrate synthase family transferase 1989 67.83 0 2251263..2252807 + 514 39935070 - RPA2001 - hypothetical protein 1990 65.96 0 2252819..2254228 + 469 39935071 - RPA2002 - FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 1991 66.04 0 2254253..2256322 - 689 39935072 - RPA2003 - cytochrome c precursor 1992 63.21 0 2256505..2257140 - 211 39935073 - RPA2004 - hypothetical protein 1993 64.37 0 2257299..2259254 + 651 39935074 - RPA2005 - multidrug ABC transporter 1994 66.38 0 2259303..2260001 + 232 161610773 psd RPA2006 - phosphatidylserine decarboxylase 1995 66.56 0 2260031..2260945 + 304 39935076 pssA RPA2007 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1996 68.33 0 2261081..2261800 + 239 39935077 - RPA2008 - hypothetical protein 1997 60.72 -1 2262032..2262805 + 257 39935078 - RPA2009 - MotA/TolQ/ExbB proton channel 1998 64.48 0 2262836..2263660 + 274 39935079 motB1 RPA2010 - putative chemotaxis protein motB1 1999 65.18 0 2263810..2265765 + 651 39935080 - RPA2011 - puative potassium uptake protein Kup 2000 66.36 0 2265975..2266301 + 108 39935081 - RPA2012 - rhodanese-like protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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