version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1721 64.41 0 1936665..1937330 - 221 39934801 - RPA1731 - molybdopterin oxidoreductase 1722 63.08 0 1937353..1938552 - 399 39934802 - RPA1732 - cytochrome P450 1723 60.96 -1 1938621..1938848 - 75 39934803 fdxA RPA1733 - putative ferredoxin 1724 67.57 0 1938948..1940381 - 477 39934804 - RPA1734 - putative amidotransferase, subunit A 1725 63.54 0 1941645..1943021 - 458 39934805 bglA RPA1736 - putative beta-glucosidase 1726 68.21 0 1943207..1943986 - 259 39934806 - RPA1737 - short chain dehydrogenase 1727 65.39 0 1944029..1945513 - 494 39934807 - RPA1738 - putative branched-chain amino acid transport system ATPase 1728 65.80 0 1945513..1946436 - 307 39934808 - RPA1739 - putative branched-chain amino acid transport system permease protein 1729 64.84 0 1946438..1947313 - 291 39934809 - RPA1740 - branched chain amino acid ABC transporter permease 1730 62.59 0 1947510..1948760 - 416 39934810 - RPA1741 - branched chain amino-acid ABC transporter substrate-binding protein 1731 62.91 0 1948929..1950047 + 372 39934811 yeaU RPA1742 - putative tartrate dehydrogenase 1732 68.21 0 1950081..1950920 - 279 39934812 - RPA1743 - hypothetical protein 1733 67.65 0 1951061..1951975 - 304 39934813 serA RPA1744 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1734 65.07 0 1952010..1953260 - 416 39934814 - RPA1745 - allantoate amidohydrolase 1735 65.09 0 1953330..1954280 - 316 39934815 - RPA1746 - LysR family transcriptional regulator 1736 63.74 0 1954396..1955214 + 272 39934816 - RPA1747 - hypothetical protein 1737 62.90 0 1955272..1956519 + 415 39934817 - RPA1748 - putative branched-chain amino acid transport system substrate-binding protein 1738 61.99 -1 1956692..1957525 + 277 39934818 - RPA1749 - inner-membrane translocator 1739 63.93 0 1957525..1958511 + 328 39934819 - RPA1750 - inner-membrane translocator 1740 65.85 0 1958508..1959242 + 244 39934820 - RPA1751 - branched chain amino acid ABC transporter ATP-binding protein 1741 64.96 0 1959226..1959930 + 234 39934821 - RPA1752 - branched chain amino acid ABC transporter ATP-binding protein 1742 65.00 0 1960124..1960903 + 259 39934822 - RPA1753 - hypothetical protein 1743 63.72 0 1961116..1964310 + 1064 39934823 ragC RPA1754 - putative cation efflux system protein 1744 67.25 0 1964300..1965502 + 400 39934824 ragD RPA1755 - cation efflux pump HlyD 1745 68.65 +1 1965670..1967184 - 504 39934825 - RPA1756 - acetyl-CoA acetyltransferase 1746 64.87 0 1967224..1968003 - 259 39934826 - RPA1757 - oxoacyl carrier protein reductase 1747 64.04 0 1968171..1968971 + 266 39934827 - RPA1758 - enoyl-CoA hydratase 1748 66.77 0 1968979..1969974 + 331 39934828 - RPA1759 - tyrosine protein kinase:aminoglycoside phosphotransferase 1749 64.80 0 1969993..1970367 + 124 39934829 - RPA1760 - hypothetical protein 1750 67.05 0 1970699..1971478 - 259 39934830 - RPA1761 - enoyl-CoA hydratase 1751 62.09 0 1971547..1972878 + 443 39934831 - RPA1762 - putative acyl-CoA dehydrogenase 1752 65.08 0 1973251..1974828 - 525 39934832 - RPA1763 - acyl-CoA synthetase 1753 65.64 0 1975165..1976037 - 290 39934833 - RPA1764 - short-chain dehydrogenase/reductase SDR 1754 64.45 0 1976145..1976957 + 270 39934834 - RPA1765 - enoyl-CoA hydratase 1755 64.34 0 1977106..1978650 + 514 39934835 - RPA1766 - acyl-CoA synthetase 1756 66.45 0 1978647..1980956 - 769 39934836 - RPA1767 - sensor histidine kinase/response regulator 1757 64.62 0 1981208..1981402 - 64 39934837 - RPA1768 - hypothetical protein 1758 66.55 0 1981608..1982498 - 296 39934838 - RPA1769 - LysR family transcriptional regulator 1759 67.51 0 1982495..1983559 - 354 39934839 - RPA1770 - hypothetical protein 1760 67.31 0 1983838..1984620 + 260 39934840 - RPA1771 - hypothetical protein 1761 65.17 0 1984721..1987531 + 936 39934841 ppc RPA1772 - phosphoenolpyruvate carboxylase 1762 60.30 -1 1987669..1987998 + 109 39934842 - RPA1773 - DMT family permease 1763 69.00 +1 1988407..1989732 + 441 39934843 - RPA1774 - porin 1764 66.01 0 1989978..1990892 - 304 39934844 - RPA1775 - putative dehydrogenase 1765 65.44 0 1991177..1992316 - 379 39934845 - RPA1776 - lipid transfer protein 1766 64.01 0 1992322..1992735 - 137 39934846 - RPA1777 - hypothetical protein 1767 68.95 +1 1993022..1994380 + 452 39934847 - RPA1778 - amidase 1768 69.14 +1 1994373..1995059 + 228 39934848 - RPA1779 - hypothetical protein 1769 65.65 0 1995247..1995837 - 196 39934849 - RPA1780 - phenylacetic acid degradation-related protein 1770 66.07 0 1996035..1997207 - 390 39934850 phbH RPA1781 - 4-hydroxybenzoate 3-monooxygenase 1771 62.51 0 1997376..1998386 + 336 39934851 - RPA1782 - TRAP dicarboxylate family transporter DctP subunit 1772 61.31 -1 1998472..1999125 + 217 39934852 - RPA1783 - TRAP dicarboxylate family transporter DctQ subunit 1773 65.29 0 1999132..2000439 + 435 39934853 - RPA1784 - TRAP dicarboxylate family transporter DctM subunit 1774 61.04 -1 2000607..2001068 + 153 39934854 - RPA1785 - hypothetical protein 1775 65.92 0 2001366..2002172 + 268 39934855 - RPA1786 - enoyl-CoA hydratase 1776 65.46 0 2002181..2004079 + 632 39934856 fcs2 RPA1787 - feruloyl-CoA synthase 1777 59.52 -1 2004318..2004737 + 139 39934857 - RPA1788 - 4-hydroxybenzoyl-CoA thioesterase 1778 64.77 0 2004817..2005974 + 385 39934858 - RPA1789 - putative branched-chain amino acid transport system substrate-binding protein 1779 67.64 0 2006289..2007107 + 272 39934859 - RPA1790 - putative diguanylate cyclase (GGDEF) 1780 68.47 +1 2007080..2007799 - 239 39934860 - RPA1791 - branched-chain amino acid transport system ATP-binding protein 1781 67.06 0 2007796..2009568 - 590 39934861 - RPA1792 - putative branched-chain amino acid transport system ATP-binding protein 1782 65.23 0 2009574..2010614 - 346 39934862 - RPA1793 - branched-chain amino acid transport system permease protein 1783 67.75 0 2010746..2011297 + 183 39934863 - RPA1794 - MarR family transcriptional regulator 1784 64.42 0 2011435..2013261 - 608 39934864 - RPA1795 - potassium-efflux system protein 1785 63.68 0 2013917..2015491 + 524 39934865 - RPA1796 - putative adenylate/guanylate cyclase 1786 70.96 +1 2015733..2017013 - 426 39934866 - RPA1797 - hypothetical protein 1787 63.59 0 2017212..2018447 - 411 39934867 - RPA1798 - putative periplasmic binding protein for ABC transporter for branched chain amino acids 1788 67.14 0 2018690..2020177 - 495 39934868 ung RPA1799 - Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related protein 1789 66.03 0 2020274..2021524 - 416 39934869 - RPA1800 - Elongator protein 3/MiaB/NifB 1790 69.08 +1 2021694..2022479 + 261 39934870 - RPA1801 - hypothetical protein 1791 70.49 +1 2022532..2023968 + 478 39934871 - RPA1802 - hypothetical protein 1792 65.80 0 2024122..2027709 + 1195 39934872 dnaE2 RPA1803 - error-prone DNA polymerase 1793 68.13 0 2027715..2028668 - 317 39934873 - RPA1804 - hypothetical protein 1794 67.61 0 2028745..2029695 + 316 39934874 - RPA1805 - LysR family transcriptional regulator 1795 70.89 +1 2029742..2031139 + 465 39934875 - RPA1806 - L-carnitine dehydratase/bile acid-inducible protein F 1796 65.54 0 2031359..2032597 + 412 39934876 - RPA1807 - HlyD family heavy metal efflux protein 1797 64.17 0 2032754..2035876 + 1040 39934877 czcA1 RPA1808 - putative RND divalent metal cation efflux transporter CzcA 1798 65.72 0 2036076..2036393 + 105 39934878 - RPA1809 - hypothetical protein 1799 68.54 +1 2036488..2037930 - 480 39934879 - RPA1810 - putative outer membrane protein 1800 63.72 0 2038105..2038884 - 259 39934880 - RPA1811 - enoyl-CoA hydratase/isomerase 1801 69.65 +1 2038968..2039705 - 245 39934881 - RPA1812 - hypothetical protein 1802 67.16 0 2039897..2040505 + 202 39934882 - RPA1813 - RNA polymerase sigma factor 1803 69.77 +1 2040502..2041146 + 214 39934883 - RPA1814 - hypothetical protein 1804 70.60 +1 2041227..2041607 + 126 39934884 - RPA1815 - hypothetical protein 1805 64.38 0 2041668..2043896 + 742 39934885 - RPA1816 - putative outer membrane receptor for iron transport 1806 65.77 0 2043919..2045028 - 369 39934886 - RPA1817 - hypothetical protein 1807 63.18 0 2045066..2046355 - 429 39934887 - RPA1818 - putative diguanylate cyclase (GGDEF) 1808 61.05 -1 2046600..2047169 + 189 39934888 - RPA1819 - RNA polymerase sigma factor 1809 69.54 +1 2047166..2047999 + 277 39934889 - RPA1820 - hypothetical protein 1810 66.47 0 2048486..2048995 + 169 39934890 - RPA1821 - hypothetical protein 1811 64.44 0 2049434..2051500 + 688 39934891 - RPA1822 - methyl-accepting chemotaxis receptor/sensory transducer 1812 65.38 0 2051982..2054615 + 877 39934892 - RPA1823 - TonB dependent receptor 1813 64.34 0 2054711..2055226 + 171 39934893 - RPA1824 - hypothetical protein 1814 60.83 -1 2055318..2055557 - 79 39934894 - RPA1825 - type IV pilus assembly PilZ 1815 66.23 0 2055690..2057048 - 452 39934895 - RPA1826 - hypothetical protein 1816 63.98 0 2057154..2057414 - 86 39934896 - RPA1827 - hypothetical protein 1817 68.51 +1 2057481..2058131 - 216 39934897 - RPA1828 - peptidase C15, pyroglutamyl peptidase I 1818 69.09 +1 2058128..2059117 - 329 39934898 argK RPA1829 - arginine/ornithine transport system ATPase 1819 63.33 0 2059204..2059533 - 109 39934899 - RPA1830 - hypothetical protein 1820 64.10 0 2059524..2059796 - 90 39934900 - RPA1831 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0