version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 127 67.92 0 146733..147611 + 292 39933207 - RPA0130 - LysR family transcriptional regulator 128 69.11 +1 147617..148312 - 231 39933208 - RPA0131 - ABC sulfate transport system, ATP-binding protein 129 72.61 +2 148309..149082 - 257 39933209 - RPA0132 - ABC sulfonate transport system, permease protein 130 69.89 +1 149072..150064 - 330 39933210 - RPA0133 - ABC sulfate transport system, periplasmic binding protein 131 66.40 0 150080..151939 - 619 39933211 hydC RPA0134 - hydrogenase gamma-fused hydrogenase large and small subunit 132 66.57 0 151939..153960 - 673 39933212 - RPA0135 - oxidoreductase 133 65.56 0 154100..155809 - 569 39933213 - RPA0136 - methyl-accepting chemotaxis receptor/sensory transducer 134 66.12 0 155814..156905 - 363 39933214 cheB1 RPA0137 - chemotaxis methylesterase, CheB1 135 59.55 -1 156926..157768 - 280 39933215 cheR1 RPA0138 - chemotaxis methyltransferase, CheR1 136 65.17 0 157930..160131 - 733 39933216 - RPA0139 - methyl-accepting chemotaxis receptor/sensory transducer 137 65.64 0 160198..160686 - 162 39933217 cheW1-3 RPA0140 - chemotaxis signal transduction/oligomerization protein CheW1-2 138 63.06 0 160747..161217 - 156 39933218 cheW1-1 RPA0141 - chemotaxis signal transduction/oligomerization protein CheW1-1 139 65.84 0 161217..163283 - 688 39933219 cheA1 RPA0142 - chemotaxis histidine kinase CheA 140 63.93 0 163280..163645 - 121 39933220 cheY1 RPA0143 - response regulator receiver, CheY1 141 58.33 -2 163645..163968 - 107 39933221 - RPA0144 - sulfate transporter 142 63.58 0 164246..165412 + 388 39933222 - RPA0145 - metal dependent phosphohydrolase domain-containing protein 143 61.81 -1 165452..165883 + 143 39933223 - RPA0146 - hypothetical protein 144 63.89 0 165961..166752 - 263 39933224 - RPA0147 - ModE family transcriptional regulator 145 68.53 +1 166873..167409 - 178 39933225 - RPA0148 - hypothetical protein 146 67.30 0 167433..168227 - 264 39933226 - RPA0149 - iron ABC transporter ATP-binding protein 147 68.72 +1 168224..169246 - 340 39933227 - RPA0150 - iron ABC transporter permease 148 65.62 0 169248..170297 - 349 39933228 - RPA0151 - iron ABC transporter periplasmic binding protein 149 68.65 +1 170294..170797 - 167 39933229 - RPA0152 - hypothetical protein 150 60.30 -1 171435..173618 + 727 39933230 - RPA0153 - outer membrane receptor for Fe transport 151 68.70 +1 173675..174313 + 212 39933231 - RPA0154 - MotA/TolQ/ExbB proton channel family protein 152 68.59 +1 174326..174793 + 155 39933232 - RPA0155 - putative tolR/exbD protein 153 67.03 0 174790..175608 + 272 39933233 - RPA0156 - tonB like protein 154 64.86 0 175963..177126 - 387 39933234 - RPA0157 - hypothetical protein 155 65.62 0 177448..177828 + 126 39933235 rplU RPA0158 - 50S ribosomal protein L21 156 63.00 0 177918..178190 + 90 39933236 rpmA RPA0159 - 50S ribosomal protein L27 157 65.67 0 178325..178924 + 199 39933237 - RPA0160 - GCN5-related N-acetyltransferase 158 67.00 0 179631..180536 - 301 39933238 - RPA0161 - DMT family permease 159 64.97 0 180688..181749 + 353 39933239 obgE RPA0162 - GTPase ObgE 160 67.90 0 181888..183018 + 376 39933240 proB RPA0163 - gamma-glutamyl kinase 161 66.51 0 183222..184514 + 430 39933241 proA RPA0164 - gamma-glutamyl phosphate reductase 162 65.87 0 184539..185168 + 209 39933242 nadD RPA0165 - nicotinic acid mononucleotide adenylyltransferase 163 63.97 0 185539..185835 + 98 39933243 - RPA0166 - Iojap-related protein 164 65.01 0 185925..186407 + 160 39933244 - RPA0167 - hypothetical protein 165 69.11 +1 186427..187818 + 463 39933245 - RPA0168 - peptidase M23B 166 65.43 0 187815..189191 + 458 39933246 ctpA RPA0169 - carboxyl-terminal protease 167 67.39 0 189342..190580 + 412 39933247 - RPA0170 - hypothetical protein 168 65.48 0 190619..191125 + 168 39933248 invA1 RPA0171 - dinucleoside polyphosphate hydrolase 169 65.36 0 191262..192332 - 356 39933249 - RPA0172 - hypothetical protein 170 62.03 -1 192604..193551 + 315 39933250 - RPA0173 - putative sugar nucleotide dehydratase 171 68.20 0 193548..194069 + 173 39933251 invA2 RPA0174 - dinucleoside polyphosphate hydrolase 172 64.71 0 194253..194660 - 135 39933252 atpC RPA0175 - F0F1 ATP synthase subunit epsilon 173 64.50 0 194774..196204 - 476 39933253 atpD RPA0176 - F0F1 ATP synthase subunit beta 174 63.93 0 196276..197151 - 291 39933254 atpG RPA0177 - F0F1 ATP synthase subunit gamma 175 64.51 0 197295..198827 - 510 39933255 atpA RPA0178 - F0F1 ATP synthase subunit alpha 176 62.39 0 198827..199387 - 186 39933256 atpH RPA0179 - F0F1 ATP synthase subunit delta 177 66.88 0 200091..200561 + 156 39933257 rlpA1 RPA0180 - rare lipoprotein A 178 67.39 0 200717..202927 - 736 39933258 priA RPA0181 - primosome assembly protein PriA 179 67.20 0 202981..204096 + 371 39933259 xerC RPA0182 - site-specific tyrosine recombinase XerC 180 64.97 0 204237..204827 + 196 39933260 - RPA0183 - hypothetical protein 181 68.51 +1 204891..205433 - 180 39933261 - RPA0184 - hypothetical protein 182 65.95 0 205473..206876 - 467 39933262 dldH RPA0185 - dihydrolipoamide dehydrogenase 183 66.27 0 206908..207654 - 248 39933263 - RPA0186 - short-chain dehydrogenase/reductase SDR 184 66.00 0 207662..208111 - 149 39933264 - RPA0187 - hypothetical protein 185 67.07 0 208123..209376 - 417 39933265 sucB RPA0188 - dihydrolipoamide acetyltransferase 186 64.60 0 209481..212438 - 985 39933266 kgd RPA0189 - alpha-ketoglutarate decarboxylase 187 66.33 0 212566..213450 - 294 39933267 sucD RPA0190 - succinyl-CoA synthetase, alpha subunit 188 63.07 0 213515..214711 - 398 39933268 sucC RPA0191 - succinyl-CoA synthetase subunit beta 189 65.12 0 214807..215775 - 322 39933269 mdh RPA0192 - malate dehydrogenase 190 62.87 0 215921..217105 - 394 39933270 - RPA0193 - AFG1-like ATPase 191 65.37 0 217188..217727 - 179 39933271 - RPA0194 - 2',5' RNA ligase 192 66.97 0 217933..218601 - 222 39933272 tesA RPA0195 - putative acyl-CoA thioesterase precursor 193 70.03 +1 218627..219370 + 247 39933273 - RPA0196 - ABC transporter ATP-binding protein 194 69.00 +1 219374..221944 + 856 39933274 - RPA0197 - hypothetical protein 195 63.38 0 222285..223076 + 263 39933275 - RPA0198 - acetate transporter 196 69.11 +1 223231..223761 + 176 39933276 - RPA0199 - GCN5-related N-acetyltransferase 197 64.50 0 223821..224189 - 122 39933277 - RPA0200 - hypothetical protein 198 64.38 0 224593..225468 - 291 39933278 - RPA0201 - hypothetical protein 199 64.13 0 225515..228232 - 905 39933279 acnA RPA0202 - aconitate hydratase 200 69.32 +1 228448..229050 + 200 39933280 cycV RPA0203 - cytochrome c biogenesis protein CcmA 201 71.00 +1 229047..229715 + 222 39933281 cycW RPA0204 - heme exporter protein CcmB 202 68.03 0 229808..230542 + 244 39933282 cycZ RPA0205 - heme exporter protein CcmC 203 68.01 0 230732..231328 + 198 39933283 cycY RPA0206 - periplasmic protein thiol 204 66.42 0 231468..231866 + 132 39933284 - RPA0207 - hypothetical protein 205 64.89 0 231999..232616 - 205 39933285 ispZ RPA0208 - intracellular septation protein A 206 67.30 0 232613..233560 - 315 39933286 ftsY RPA0209 - signal recognition particle-docking protein FtsY 207 67.69 0 233589..234563 + 324 39933287 - RPA0210 - pseudouridine synthase:pseudouridine synthase, Rlu 208 65.28 0 234927..236879 + 650 39933288 - RPA0211 - acetate--CoA ligase 209 67.23 0 237262..237789 + 175 39933289 - RPA0212 - ErfK/YbiS/YcfS/YnhG 210 74.88 +2 237864..239933 - 689 39933290 - RPA0213 - OmpA family protein 211 68.60 +1 240179..240436 - 85 39933291 - RPA0214 - hypothetical protein 212 63.39 0 240436..240924 - 162 39933292 - RPA0215 - general stress protein 26 213 62.58 0 241162..241944 - 260 39933293 sdhB RPA0216 - succinate dehydrogenase iron-sulfur subunit 214 66.72 0 242052..243875 - 607 39933294 sdhA RPA0217 - succinate dehydrogenase flavoprotein subunit 215 60.63 -1 243879..244292 - 137 39933295 sdhD RPA0218 - succinate dehydrogenase, cytochrome b subunit 216 64.16 0 244289..244687 - 132 39933296 sdhC RPA0219 - succinate dehydrogenase, cytochrome b subunit 217 66.67 0 245070..246014 + 314 39933297 czcD RPA0220 - cation diffusion facilitator family transporter 218 65.28 0 246248..247759 - 503 39933298 matB RPA0221 - malonyl-CoA synthase 219 63.02 0 248034..248609 + 191 39933299 - RPA0222 - beta-Ig-H3/fasciclin domain-containing protein 220 64.95 0 248831..249469 + 212 39933300 - RPA0223 - hypothetical protein 221 62.05 -1 249585..250364 + 259 39933301 - RPA0224 - twin-arginine translocation pathway signal 222 66.47 0 250637..251155 + 172 39933302 sodC RPA0225 - putative superoxide dismutase (Cu/Zn) 223 70.62 +1 251299..252486 - 395 39933303 - RPA0226 - major facilitator transporter 224 66.31 0 252707..253819 + 370 39933304 leuB RPA0227 - 3-isopropylmalate dehydrogenase 225 68.16 0 253976..254377 - 133 39933305 - RPA0228 - hypothetical protein 226 69.88 +1 254521..255330 - 269 39933306 - RPA0229 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0