version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1634 65.47 0 1828955..1829704 - 249 39934714 - RPA1644 - hypothetical protein 1635 63.60 0 1829694..1829921 - 75 39934715 - RPA1645 - hypothetical protein 1636 64.81 0 1830020..1830289 - 89 39934716 - RPA1646 - hypothetical protein 1637 70.06 +1 1830366..1831367 - 333 39934717 - RPA1647 - alpha/beta hydrolase fold 1638 68.09 0 1831520..1832782 + 420 39934718 - RPA1648 - membrane permeases, cation efflux pumps 1639 66.83 0 1832779..1834005 + 408 39934719 - RPA1649 - hypothetical protein 1640 65.35 0 1833998..1834678 + 226 39934720 - RPA1650 - ABC transporter ATP-binding protein 1641 60.43 -1 1834778..1835995 - 405 39934721 - RPA1651 - leucine/isoleucine/valine-binding protein precursor 1642 59.61 -1 1836597..1837418 + 273 39934722 - RPA1652 - flagellar basal-body rod protein FlgG 1643 65.16 0 1837519..1837917 - 132 39934723 - RPA1653 - hypothetical protein 1644 67.55 0 1838052..1839065 - 337 39934724 - RPA1654 - putative oxido-reductase 1645 63.28 0 1839226..1840434 - 402 39934725 - RPA1655 - urea/short-chain binding protein of ABC transporter 1646 66.52 0 1840537..1841232 + 231 39934726 - RPA1656 - urease accessory protein 1647 65.02 0 1841261..1842475 - 404 39934727 - RPA1657 - putative diguanylate cyclase (GGDEF) 1648 62.26 0 1843254..1843616 + 120 39934728 ptpS RPA1658 - putative 6-pyruvoyl tetrahydropterin synthase 1649 60.91 -1 1843683..1844273 - 196 39934729 - RPA1659 - hemerythrin HHE cation binding region 1650 67.11 0 1844415..1847336 - 973 39934730 - RPA1660 - putative cation transporting P-type ATPase 1651 63.77 0 1847388..1847663 + 91 39934731 - RPA1661 - hypothetical protein 1652 65.93 0 1847694..1848374 - 226 39934732 - RPA1662 - hypothetical protein 1653 63.15 0 1848482..1849333 - 283 39934733 hpaD RPA1663 - putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1654 63.17 0 1849361..1849903 - 180 39934734 - RPA1664 - glyoxalase/bleomycin resistance protein/dioxygenase 1655 64.03 0 1850059..1850361 - 100 39934735 - RPA1665 - hypothetical protein 1656 66.07 0 1850616..1851965 - 449 39934736 hemN1 RPA1666 - coproporphyrinogen III oxidase 1657 65.61 0 1851994..1852656 - 220 39934737 bchJ RPA1667 - bacteriochlorophyll 4-vinyl reductase 1658 61.96 -1 1852676..1854373 - 565 39934738 bchE RPA1668 - magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 1659 62.47 0 1854531..1854959 - 142 39934739 - RPA1669 - hypothetical protein 1660 67.34 0 1855181..1855921 + 246 39934740 - RPA1670 - metallophosphoesterase 1661 66.60 0 1855925..1857364 + 479 39934741 - RPA1671 - serine/threonine protein kinase 1662 60.83 -1 1857410..1858060 - 216 39934742 - RPA1672 - transport-associated protein 1663 65.01 0 1858439..1860790 + 783 39934743 - RPA1673 - putative phosphoketolase 1664 66.47 0 1860968..1861471 + 167 39934744 cheY3 RPA1674 - response regulator receiver, CheY3 1665 64.67 0 1862118..1864268 + 716 39934745 - RPA1675 - methyl-accepting chemotaxis receptor/sensory transducer 1666 66.13 0 1864447..1867260 + 937 39934746 cheA3 RPA1676 - chemotaxis histidine kinase CheA 1667 66.67 0 1867257..1867757 + 166 39934747 cheW3 RPA1677 - chemotaxis signal transduction/oligomerization protein CheW3 1668 60.84 -1 1867811..1868686 + 291 39934748 cheR3 RPA1678 - chemotaxis methyltransferase, CheR3 1669 61.90 -1 1868698..1869012 + 104 39934749 - RPA1679 - hypothetical protein 1670 64.91 0 1869241..1870491 + 416 39934750 - RPA1680 - putative response regulator and cylclic diguanylate phosphodiesterase (EAL) 1671 65.39 0 1870522..1873113 - 863 39934751 - RPA1681 - sensor histidine kinase 1672 63.48 0 1873536..1874162 + 208 39934752 - RPA1682 - two-component LuxR family transcriptional regulator 1673 68.84 +1 1874213..1874995 - 260 39934753 - RPA1683 - short-chain dehydrogenase/reductase SDR 1674 66.01 0 1875104..1875865 + 253 39934754 - RPA1684 - short-chain dehydrogenase/reductase SDR 1675 66.33 0 1876349..1880449 + 1366 39934755 - RPA1685 - serine protease/outer membrane autotransporter 1676 65.61 0 1880602..1882206 - 534 39934756 - RPA1686 - glucose-methanol-choline oxidoreductase 1677 66.11 0 1882277..1883710 - 477 39934757 - RPA1687 - aldehyde dehydrogenase 1678 62.45 0 1884296..1884817 + 173 39934758 - RPA1688 - GCN5-related N-acetyltransferase 1679 69.67 +1 1885144..1886307 + 387 39934759 - RPA1689 - hypothetical protein 1680 66.67 0 1886304..1886744 - 146 39934760 - RPA1690 - hypothetical protein 1681 68.12 0 1886876..1888249 - 457 39934761 matE3 RPA1691 - cation efflux pump (multidrug resistance protein) 1682 65.05 0 1888524..1889759 + 411 39934762 - RPA1692 - major facilitator transporter 1683 59.30 -1 1889961..1890557 + 198 39934763 sodB RPA1693 - superoxide dismutase 1684 64.00 0 1890635..1891084 + 149 39934764 ccrB RPA1694 - camphor resistance protein CrcB 1685 64.00 0 1891147..1892007 - 286 39934765 - RPA1695 - cupin domain-containing protein 1686 60.06 -1 1892427..1893062 + 211 39934766 - RPA1696 - hypothetical protein 1687 66.85 0 1893265..1893807 - 180 39934767 - RPA1697 - competence-damaged protein 1688 65.32 0 1893871..1894614 - 247 39934768 - RPA1698 - hypothetical protein 1689 65.94 0 1894760..1896547 + 595 39934769 - RPA1699 - putative acyl-CoA dehydrogenase 1690 69.59 +1 1896682..1898184 - 500 39934770 - RPA1700 - amidase 1691 69.26 +1 1898566..1899336 - 256 39934771 - RPA1701 - hypothetical protein 1692 65.38 0 1899531..1901087 - 518 39934772 - RPA1702 - acyl-CoA synthetase 1693 65.39 0 1901366..1902541 - 391 39934773 - RPA1703 - acetyl-CoA acetyltransferase 1694 58.33 -2 1902643..1903350 + 235 39934774 - RPA1704 - TetR family transcriptional regulator 1695 65.00 0 1903489..1904565 + 358 39934775 - RPA1705 - 3-hydroxyacyl-CoA dehydrogenase type II 1696 66.29 0 1904789..1905595 + 268 39934776 - RPA1706 - putative enoyl-CoA hydratase 1697 65.39 0 1905646..1907520 + 624 39934777 fcs1 RPA1707 - acyl-CoA synthetase 1698 67.29 0 1907687..1908814 + 375 39934778 - RPA1708 - putative acyl-CoA dehydrogenase 1699 65.87 0 1908951..1910198 + 415 39934779 - RPA1709 - putative acyl-CoA dehydrogenase 1700 65.46 0 1910349..1911593 + 414 39934780 - RPA1710 - putative acyl-CoA dehydrogenase 1701 67.95 0 1911756..1912454 + 232 39934781 pnbA RPA1711 - nitroreductase 1702 68.84 +1 1912856..1913638 - 260 39934782 - RPA1712 - enoyl-CoA hydratase/isomerase 1703 63.41 0 1913941..1914615 + 224 39934783 - RPA1713 - cyclic nucleotide-binding domain-containing protein 1704 65.84 0 1914669..1915511 + 280 39934784 - RPA1714 - hypothetical protein 1705 61.28 -1 1915666..1916166 + 166 39934785 - RPA1715 - hypothetical protein 1706 63.46 0 1916440..1918650 + 736 39934786 - RPA1716 - putative diguanylate cyclase (GGDEF) 1707 64.60 0 1918857..1919243 - 128 39934787 - RPA1717 - hypothetical protein 1708 63.73 0 1919490..1919897 + 135 39934788 - RPA1718 - hypothetical protein 1709 68.77 +1 1919904..1920236 - 110 39934789 - RPA1719 - hypothetical protein 1710 63.93 0 1920300..1920920 - 206 39934790 - RPA1720 - hypothetical protein 1711 67.97 0 1921022..1921939 + 305 39934791 - RPA1721 - LysR family transcriptional regulator 1712 67.59 0 1921936..1922586 + 216 39934792 alkB RPA1722 - alkylated DNA repair protein 1713 64.56 0 1922593..1923924 - 443 39934793 paaK RPA1723 - phenylacetyl-CoA ligase 1714 69.41 +1 1923939..1924412 - 157 39934794 paaI RPA1724 - putative phenylacetic acid degredation protein 1715 67.75 0 1924637..1926676 + 679 39934795 - RPA1725 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 1716 68.44 +1 1926733..1927749 + 338 39934796 - RPA1726 - putative oxidoreductase 1717 65.58 0 1927991..1928728 + 245 39934797 - RPA1727 - hypothetical protein 1718 59.95 -1 1929247..1933506 - 1419 39934798 - RPA1728 - hypothetical protein 1719 67.39 0 1934248..1935210 - 320 39934799 - RPA1729 - fatty acid desaturase family proteiin 1720 66.50 0 1935263..1936486 - 407 39934800 - RPA1730 - OsmC-like protein 1721 64.41 0 1936665..1937330 - 221 39934801 - RPA1731 - molybdopterin oxidoreductase 1722 63.08 0 1937353..1938552 - 399 39934802 - RPA1732 - cytochrome P450 1723 60.96 -1 1938621..1938848 - 75 39934803 fdxA RPA1733 - putative ferredoxin 1724 67.57 0 1938948..1940381 - 477 39934804 - RPA1734 - putative amidotransferase, subunit A 1725 63.54 0 1941645..1943021 - 458 39934805 bglA RPA1736 - putative beta-glucosidase 1726 68.21 0 1943207..1943986 - 259 39934806 - RPA1737 - short chain dehydrogenase 1727 65.39 0 1944029..1945513 - 494 39934807 - RPA1738 - putative branched-chain amino acid transport system ATPase 1728 65.80 0 1945513..1946436 - 307 39934808 - RPA1739 - putative branched-chain amino acid transport system permease protein 1729 64.84 0 1946438..1947313 - 291 39934809 - RPA1740 - branched chain amino acid ABC transporter permease 1730 62.59 0 1947510..1948760 - 416 39934810 - RPA1741 - branched chain amino-acid ABC transporter substrate-binding protein 1731 62.91 0 1948929..1950047 + 372 39934811 yeaU RPA1742 - putative tartrate dehydrogenase 1732 68.21 0 1950081..1950920 - 279 39934812 - RPA1743 - hypothetical protein 1733 67.65 0 1951061..1951975 - 304 39934813 serA RPA1744 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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