version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1567 69.86 +1 1752568..1753539 + 323 39934647 - RPA1577 - hypothetical protein 1568 63.70 0 1753696..1754469 - 257 39934648 fpr RPA1578 - ferredoxin--NADP+ reductase 1569 66.25 0 1754786..1755994 - 402 39934649 - RPA1579 - L-carnitine dehydratase/bile acid-inducible protein F 1570 68.16 0 1756159..1759167 - 1002 39934650 putA RPA1580 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1571 66.26 0 1759231..1759959 + 242 39934651 - RPA1581 - hypothetical protein 1572 67.17 0 1759984..1761765 - 593 39934652 cyaA RPA1582 - ferredoxin:adenylate/guanylate cyclase 1573 69.64 +1 1761958..1763067 - 369 39934653 - RPA1583 - hypothetical protein 1574 68.23 0 1763064..1764533 - 489 39934654 - RPA1584 - hypothetical protein 1575 64.22 0 1764777..1765472 + 231 39934655 - RPA1585 - hemolysin III 1576 66.29 0 1765532..1766332 + 266 39934656 - RPA1586 - short-chain dehydrogenase/reductase SDR 1577 71.23 +1 1766530..1766814 + 94 39934657 - RPA1587 - hypothetical protein 1578 68.33 0 1766818..1767900 - 360 39934658 - RPA1588 - putative L-allo-threonine aldolase 1579 62.62 0 1768213..1768830 - 205 39934659 rpsD RPA1589 - 30S ribosomal protein S4 1580 69.63 +1 1769020..1769796 - 258 39934660 - RPA1590 - hypothetical protein 1581 64.65 0 1769796..1770191 - 131 39934661 - RPA1591 - hypothetical protein 1582 71.57 +2 1770245..1771039 - 264 39934662 murI RPA1592 - glutamate racemase 1583 66.05 0 1771122..1771610 - 162 39934663 - RPA1593 - thioesterase superfamily protein 1584 66.23 0 1771765..1773129 + 454 39934664 trpB-1 RPA1594 - tryptophan synthase subunit beta 1585 53.84 -2 1773467..1774417 + 316 39934665 - RPA1595 - hypothetical protein 1586 63.41 0 1774809..1775177 + 122 39934666 - RPA1596 - tryptophan synthase subunit beta 1587 66.40 0 1775573..1777783 + 736 39934667 purQ RPA1597 - phosphoribosylformylglycinamidine synthase II 1588 63.11 0 1778029..1779210 - 393 39934668 - RPA1598 - peptidyl-prolyl cis-trans isomerase 1589 60.61 -1 1779285..1779647 - 120 39934669 - RPA1599 - hypothetical protein 1590 65.40 0 1779811..1780047 + 78 39934670 - RPA1600 - BolA-like protein 1591 63.81 0 1780122..1780646 - 174 39934671 - RPA1601 - MarR family transcriptional regulator 1592 69.16 +1 1781319..1782041 + 240 39934672 - RPA1602 - hypothetical protein 1593 63.67 0 1782103..1783170 - 355 39934673 - RPA1603 - putative fatty acid desaturase 1594 63.61 0 1783527..1784507 - 326 39934674 - RPA1604 - hypothetical protein 1595 66.35 0 1784553..1785812 - 419 39934675 - RPA1605 - hypothetical protein 1596 60.42 -1 1786040..1786423 + 127 39934676 - RPA1606 - hypothetical protein 1597 67.96 0 1786420..1786962 + 180 39934677 - RPA1607 - Appr-1''-p processing enzyme family protein 1598 62.61 0 1787022..1788302 + 426 39934678 - RPA1608 - beta-lactamase 1599 68.69 +1 1788313..1789941 - 542 39934679 mdlC RPA1609 - benzoylformate decarboxylase 1600 68.41 +1 1790211..1791068 - 285 39934680 - RPA1610 - hypothetical protein 1601 66.58 0 1791081..1792175 - 364 39934681 - RPA1611 - L-carnitine dehydratase/bile acid-inducible protein F 1602 64.19 0 1792376..1793548 - 390 39934682 - RPA1612 - putative acyl-CoA dehydrogenase 1603 65.01 0 1793582..1794847 - 421 39934683 - RPA1613 - cytochrome P450 1604 65.98 0 1795195..1796367 + 390 39934684 ivd2 RPA1614 - isovaleryl-CoA dehydrogenase 1605 65.66 0 1796463..1797257 + 264 39934685 - RPA1615 - putative methyltransferase 1606 65.06 0 1797254..1798060 - 268 39934686 - RPA1616 - hypothetical protein 1607 69.59 +1 1798147..1798728 - 193 39934687 - RPA1617 - ErfK/YbiS/YcfS/YnhG 1608 69.32 +1 1798909..1800453 + 514 39934688 ilvX RPA1618 - hypothetical protein 1609 65.64 0 1800509..1800997 + 162 39934689 - RPA1619 - hypothetical protein 1610 67.60 0 1801160..1801480 - 106 39934690 - RPA1620 - hypothetical protein 1611 56.13 -2 1801680..1802552 + 290 39934691 - RPA1621 - hypothetical protein 1612 67.92 0 1802706..1803986 - 426 39934692 - RPA1622 - hypothetical protein 1613 66.51 0 1804226..1804879 - 217 39934693 - RPA1623 - hypothetical protein 1614 65.29 0 1804927..1805433 + 168 39934694 - RPA1624 - hypothetical protein 1615 70.17 +1 1805442..1806269 - 275 39934695 cysQ RPA1625 - putative CysQ protein 1616 62.86 0 1806403..1807059 + 218 39934696 - RPA1626 - hypothetical protein 1617 66.17 0 1807250..1810063 + 937 39934697 cheA2 RPA1627 - chemotaxis histidine kinase CheA 1618 66.67 0 1810060..1810560 + 166 39934698 cheW2 RPA1628 - chemotaxis signal transduction/oligomerization protein CheW2 1619 62.02 -1 1810628..1810993 + 121 39934699 cheY2 RPA1629 - chemotaxis response regulator, CheY2 1620 65.56 0 1811072..1812247 + 391 39934700 cheB2 RPA1630 - chemotaxis-specific methylesterase 1621 64.85 0 1812244..1813122 + 292 39934701 cheR2 RPA1631 - chemotaxis methyltransferase, CheR2 1622 60.11 -1 1813413..1814114 - 233 39934702 ctrA RPA1632 - two-component cell cycle transcriptional regulatorCtrA 1623 64.40 0 1814482..1815807 + 441 39934703 fliI RPA1633 - flagellum-specific ATP synthase 1624 62.94 0 1815917..1816345 + 142 39934704 - RPA1634 - flagellar export FliJ 1625 64.85 0 1816522..1817070 + 182 39934705 - RPA1635 - RNA polymerase ECF-type sigma factor 1626 67.93 0 1817070..1818017 + 315 39934706 - RPA1636 - hypothetical protein 1627 62.69 0 1818215..1818415 - 66 39934707 - RPA1637 - hypothetical protein 1628 66.39 0 1818747..1820879 - 710 39934708 flhA RPA1638 - flagellar biosynthesis protein FlhA 1629 68.76 +1 1821142..1822386 + 414 39934709 - RPA1639 - major facilitator superfamily MFS_1 1630 64.89 0 1822478..1824169 - 563 39934710 - RPA1640 - methyl-accepting chemotaxis receptor/sensory transducer 1631 65.36 0 1825086..1826006 + 306 39934711 - RPA1641 - AraC family transcriptional regulator 1632 64.55 0 1826387..1827901 + 504 39934712 - RPA1642 - putative diguanylate cyclase (GGDEF) 1633 65.86 0 1828098..1828964 + 288 39934713 - RPA1643 - high affinity iron permease FTR1 1634 65.47 0 1828955..1829704 - 249 39934714 - RPA1644 - hypothetical protein 1635 63.60 0 1829694..1829921 - 75 39934715 - RPA1645 - hypothetical protein 1636 64.81 0 1830020..1830289 - 89 39934716 - RPA1646 - hypothetical protein 1637 70.06 +1 1830366..1831367 - 333 39934717 - RPA1647 - alpha/beta hydrolase fold 1638 68.09 0 1831520..1832782 + 420 39934718 - RPA1648 - membrane permeases, cation efflux pumps 1639 66.83 0 1832779..1834005 + 408 39934719 - RPA1649 - hypothetical protein 1640 65.35 0 1833998..1834678 + 226 39934720 - RPA1650 - ABC transporter ATP-binding protein 1641 60.43 -1 1834778..1835995 - 405 39934721 - RPA1651 - leucine/isoleucine/valine-binding protein precursor 1642 59.61 -1 1836597..1837418 + 273 39934722 - RPA1652 - flagellar basal-body rod protein FlgG 1643 65.16 0 1837519..1837917 - 132 39934723 - RPA1653 - hypothetical protein 1644 67.55 0 1838052..1839065 - 337 39934724 - RPA1654 - putative oxido-reductase 1645 63.28 0 1839226..1840434 - 402 39934725 - RPA1655 - urea/short-chain binding protein of ABC transporter 1646 66.52 0 1840537..1841232 + 231 39934726 - RPA1656 - urease accessory protein 1647 65.02 0 1841261..1842475 - 404 39934727 - RPA1657 - putative diguanylate cyclase (GGDEF) 1648 62.26 0 1843254..1843616 + 120 39934728 ptpS RPA1658 - putative 6-pyruvoyl tetrahydropterin synthase 1649 60.91 -1 1843683..1844273 - 196 39934729 - RPA1659 - hemerythrin HHE cation binding region 1650 67.11 0 1844415..1847336 - 973 39934730 - RPA1660 - putative cation transporting P-type ATPase 1651 63.77 0 1847388..1847663 + 91 39934731 - RPA1661 - hypothetical protein 1652 65.93 0 1847694..1848374 - 226 39934732 - RPA1662 - hypothetical protein 1653 63.15 0 1848482..1849333 - 283 39934733 hpaD RPA1663 - putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1654 63.17 0 1849361..1849903 - 180 39934734 - RPA1664 - glyoxalase/bleomycin resistance protein/dioxygenase 1655 64.03 0 1850059..1850361 - 100 39934735 - RPA1665 - hypothetical protein 1656 66.07 0 1850616..1851965 - 449 39934736 hemN1 RPA1666 - coproporphyrinogen III oxidase 1657 65.61 0 1851994..1852656 - 220 39934737 bchJ RPA1667 - bacteriochlorophyll 4-vinyl reductase 1658 61.96 -1 1852676..1854373 - 565 39934738 bchE RPA1668 - magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 1659 62.47 0 1854531..1854959 - 142 39934739 - RPA1669 - hypothetical protein 1660 67.34 0 1855181..1855921 + 246 39934740 - RPA1670 - metallophosphoesterase 1661 66.60 0 1855925..1857364 + 479 39934741 - RPA1671 - serine/threonine protein kinase 1662 60.83 -1 1857410..1858060 - 216 39934742 - RPA1672 - transport-associated protein 1663 65.01 0 1858439..1860790 + 783 39934743 - RPA1673 - putative phosphoketolase 1664 66.47 0 1860968..1861471 + 167 39934744 cheY3 RPA1674 - response regulator receiver, CheY3 1665 64.67 0 1862118..1864268 + 716 39934745 - RPA1675 - methyl-accepting chemotaxis receptor/sensory transducer 1666 66.13 0 1864447..1867260 + 937 39934746 cheA3 RPA1676 - chemotaxis histidine kinase CheA 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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