version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1225 63.23 0 1347482..1348354 + 290 39934305 - RPA1230 - putative ABC transporter, permease protein 1226 63.44 0 1348357..1349502 + 381 39934306 - RPA1231 - ABC transporter permease 1227 63.78 0 1349499..1350260 + 253 39934307 - RPA1232 - putative branched-chain amino acid transport system ATP-binding protein 1228 62.53 0 1350264..1351013 + 249 39934308 - RPA1233 - putative branched-chain amino acid transport system ATP-binding protein 1229 70.14 +1 1350997..1352697 + 566 39934309 - RPA1234 - long-chain-fatty-acid--CoA ligase 1230 61.69 -1 1352737..1353942 + 401 39934310 - RPA1235 - leucine-binding protein (LBP) 1231 65.66 0 1354133..1355329 - 398 39934311 - RPA1236 - putative acyl-CoA dehydrogenase 1232 68.16 0 1355348..1356484 - 378 39934312 - RPA1237 - acyl-CoA dehydrogenase 1233 63.37 0 1356488..1357336 - 282 39934313 - RPA1238 - enoyl-CoA hydratase 1234 68.19 0 1357474..1358460 + 328 39934314 exbB1 RPA1239 - putative biopolymer transport protein ExbB 1235 66.44 0 1358465..1358902 + 145 39934315 exbD1 RPA1240 - biopolymer transport protein ExbD 1236 69.99 +1 1358899..1359771 + 290 39934316 - RPA1241 - tonB transport protein 1237 66.01 0 1359791..1361302 - 503 39934317 fadD1 RPA1242 - AMP-dependent synthetase and ligase 1238 66.58 0 1361637..1362803 + 388 39934318 - RPA1243 - late embryogenesis abundant protein 1239 64.69 0 1362819..1363424 + 201 39934319 - RPA1244 - hypothetical protein 1240 60.56 -1 1363411..1363803 + 130 39934320 - RPA1245 - hypothetical protein 1241 66.24 0 1363800..1364501 + 233 39934321 - RPA1246 - hypothetical protein 1242 63.53 0 1364565..1365647 + 360 39934322 rbn2 RPA1247 - ribonuclease BN 1243 66.99 0 1365644..1366570 - 308 39934323 - RPA1248 - two-component LuxR family transcriptional regulator 1244 64.02 0 1366560..1369928 - 1122 39934324 - RPA1249 - sensor histidine kinase 1245 60.89 -1 1370185..1371447 + 420 39934325 - RPA1250 - amide-urea binding protein 1246 62.35 0 1371614..1372540 + 308 39934326 - RPA1251 - putative branched-chain amino acid transport system permease protein 1247 62.33 0 1372555..1373706 + 383 39934327 - RPA1252 - putative high-affinity branched-chain amino acid transport system permease protein 1248 59.92 -1 1373717..1374472 + 251 39934328 - RPA1253 - branched-chain amino acid transport system ATP-binding protein 1249 61.74 -1 1374483..1375172 + 229 39934329 - RPA1254 - putative ATP-binding component of ABC transporter 1250 62.93 0 1375209..1376438 + 409 39934330 fmdA RPA1255 - formamide amidohydrolase 1251 64.06 0 1376627..1376971 + 114 39934331 fmdB RPA1256 - putative formamidase regulatory protein FmdB 1252 70.05 +1 1377086..1377883 - 265 39934332 cobS RPA1257 - cobalamin (5`-phosphate) synthase 1253 65.72 0 1378063..1378485 + 140 39934333 - RPA1258 - hypothetical protein 1254 66.27 0 1378745..1381489 + 914 39934334 - RPA1259 - putative cation-transporting P-type ATPase 1255 66.23 0 1381578..1382483 + 301 39934335 - RPA1260 - universal stress protein 1256 66.92 0 1382580..1384175 + 531 39934336 - RPA1261 - FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 1257 70.11 +1 1384147..1384611 - 154 39934337 - RPA1262 - hypothetical protein 1258 64.13 0 1384843..1385118 + 91 39934338 - RPA1263 - hypothetical protein 1259 66.36 0 1385318..1386934 + 538 161610775 fliF RPA1264 - flagellar MS-ring protein 1260 62.99 0 1386941..1388029 + 362 39934340 fliG RPA1265 - flagellar motor switch protein G 1261 67.30 0 1388029..1388655 + 208 39934341 fliH RPA1266 - flagellar assembly protein H 1262 64.37 0 1388673..1389020 + 115 39934342 fliY RPA1267 - flagellar motor switch protein 1263 66.88 0 1389068..1390447 + 459 39934343 flbD RPA1268 - two component, sigma54 specific, transcriptional regulator, Fis family 1264 62.18 0 1390811..1390966 - 51 39934344 - RPA1269 - hypothetical protein 1265 60.57 -1 1391021..1391299 - 92 39934345 - RPA1270 - hypothetical protein 1266 62.96 0 1391337..1391768 - 143 39934346 - RPA1271 - hypothetical protein 1267 63.89 0 1391835..1392662 + 275 39934347 - RPA1272 - transglutaminase-like domain-containing protein 1268 64.86 0 1392794..1393903 + 369 39934348 - RPA1273 - deoxyribonuclease 1269 61.22 -1 1394619..1395500 + 293 39934349 - RPA1274 - Dps protein family starvation-inducible DNA-binding protein 1270 63.62 0 1395763..1396287 - 174 39934350 - RPA1275 - hypothetical protein 1271 65.16 0 1396520..1397713 - 397 39934351 carA RPA1276 - carbamoyl phosphate synthase small subunit 1272 67.80 0 1397862..1398566 + 234 39934352 - RPA1277 - beta-ketoadipate enol-lactone hydrolase 1273 62.06 -1 1398724..1399179 + 151 39934353 - RPA1278 - hypothetical protein 1274 64.72 0 1399267..1399575 - 102 39934354 - RPA1279 - hypothetical protein 1275 64.31 0 1399766..1400614 + 282 39934355 - RPA1280 - hypothetical protein 1276 61.81 -1 1400728..1401201 - 157 39934356 - RPA1281 - hypothetical protein 1277 62.86 0 1401194..1401508 - 104 39934357 - RPA1282 - ArsR family transcriptional regulator 1278 66.34 0 1401637..1402254 + 205 39934358 - RPA1283 - homoserine/homoserine lactone/threonine efflux protein 1279 66.29 0 1402378..1403175 - 265 39934359 - RPA1284 - N-formylglutamate amidohydrolase 1280 65.69 0 1403337..1403744 + 135 39934360 - RPA1285 - hypothetical protein 1281 61.73 -1 1403761..1404003 - 80 39934361 - RPA1286 - hypothetical protein 1282 67.71 0 1404459..1406468 + 669 39934362 dnaG RPA1287 - DNA primase 1283 63.90 0 1406728..1408824 + 698 39934363 rpoD RPA1288 - RNA polymerase sigma factor RpoD 1284 62.76 0 1408843..1409175 + 110 39934364 - RPA1289 - hypothetical protein 1285 64.20 0 1409572..1409895 - 107 39934365 - RPA1290 - plasmid maintenance system antidote protein 1286 58.42 -2 1409905..1410195 - 96 39934366 - RPA1291 - putative proteic killer suppression protein 1287 63.59 0 1410470..1410664 - 64 39934367 - RPA1292 - hypothetical protein 1288 64.43 0 1410628..1411431 - 267 39934368 - RPA1293 - putative IS5 transposase 1289 50.96 -2 1411896..1413359 + 487 39934369 - RPA1294 - hypothetical protein 1290 67.33 0 1413532..1414743 + 403 39934370 - RPA1295 - putative signal transduction histidine kinase 1291 66.16 0 1414958..1416721 + 587 39934371 - RPA1296 - diguanylate cyclase 1292 69.25 +1 1416913..1417764 - 283 39934372 - RPA1297 - Short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase 1293 64.70 0 1417955..1419070 - 371 39934373 - RPA1298 - 3-oxoacyl-(acyl carrier protein) synthase III 1294 67.82 0 1419368..1419715 + 115 39934374 - RPA1299 - hypothetical protein 1295 59.85 -1 1419941..1420894 + 317 39934375 - RPA1300 - restriction system protein 1296 63.30 0 1421072..1421635 + 187 39934376 pfpI RPA1301 - intracellular protease 1297 69.09 +1 1421829..1422200 - 123 39934377 - RPA1302 - hypothetical protein 1298 67.03 0 1422427..1423245 + 272 39934378 - RPA1303 - lytic murein transglycosylase 1299 61.90 -1 1423276..1423989 - 237 39934379 - RPA1304 - flagellar hook capping protein 1300 71.00 +1 1424002..1425594 - 530 39934380 - RPA1305 - flagellar hook-length control protein 1301 68.99 +1 1425895..1427100 + 401 39934381 trmU RPA1306 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1302 65.73 0 1427120..1427758 + 212 39934382 - RPA1307 - phosphatidylethanolamine N-methyltransferase 1303 69.32 +1 1428428..1428691 - 87 39934383 - RPA1308 - hypothetical protein 1304 64.63 0 1429578..1429871 + 97 39934384 - RPA1309 - transposase 1305 62.72 0 1430328..1431443 + 371 39934385 - RPA1310 - putative NADH:flavin oxidoreductase 1306 63.66 0 1431728..1432060 + 110 39934386 - RPA1311 - 4-carboxymuconolactone decarboxylase 1307 61.69 -1 1432289..1432831 + 180 39934387 - RPA1312 - hypothetical protein 1308 65.24 0 1433238..1435136 + 632 39934388 - RPA1313 - sensor histidine kinase 1309 63.43 0 1435192..1435623 + 143 39934389 - RPA1314 - response regulator receiver (CheY-like protein) 1310 63.61 0 1435620..1436306 + 228 39934390 - RPA1315 - two-component LuxR family transcriptional regulator 1311 59.61 -1 1436415..1436669 - 84 39934391 - RPA1316 - hypothetical protein 1312 66.57 0 1437556..1438581 + 341 39934392 cioB RPA1319 - putative cytochrome bd-I oxidase subunit II 1313 62.78 0 1438689..1438997 + 102 39934393 - RPA1320 - hypothetical protein 1314 65.12 0 1439181..1440020 + 279 39934394 - RPA1321 - AraC family transcriptional regulator 1315 58.23 -2 1440217..1440915 + 232 39934395 - RPA1322 - putative signal transduction histidine kinase 1316 66.23 0 1441280..1441510 - 76 39934396 - RPA1323 - hypothetical protein 1317 66.62 0 1441783..1443834 + 683 39934397 - RPA1324 - FusB/FusC fusaric acid resistance pump 1318 60.39 -1 1443848..1444054 + 68 39934398 - RPA1324a - hypothetical protein 1319 67.94 0 1444051..1444992 + 313 39934399 - RPA1325 - FusE-MFP/HlyD family membrane fusion protein 1320 62.50 0 1445131..1446114 - 327 39934400 - RPA1326 - AraC family transcriptional regulator 1321 65.20 0 1446214..1447170 + 318 39934401 - RPA1327 - Ser/Thr protein kinase 1322 65.99 0 1447208..1451350 + 1380 39934402 - RPA1328 - sensor histidine kinase 1323 65.98 0 1451481..1452938 + 485 39934403 fumC RPA1329 - fumarate hydratase 1324 69.71 +1 1452940..1454220 + 426 39934404 - RPA1330 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0