version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1141 69.12 +1 1253883..1254737 - 284 39934221 - RPA1146 - putative periplasmic ligand-binding sensor protein 1142 66.89 0 1254853..1255746 - 297 39934222 - RPA1147 - hypothetical protein 1143 66.86 0 1255743..1256786 - 347 39934223 - RPA1148 - glycosyl transferase, family 2 1144 68.40 +1 1256880..1257857 - 325 39934224 hisG RPA1149 - ATP phosphoribosyltransferase 1145 69.45 +1 1257854..1259002 - 382 39934225 hisZ RPA1150 - ATP phosphoribosyltransferase regulatory subunit 1146 69.97 +1 1259147..1259902 - 251 39934226 - RPA1151 - hypothetical protein 1147 67.79 0 1260277..1260810 + 177 39934227 - RPA1152 - hypothetical protein 1148 65.09 0 1260807..1261757 + 316 39934228 ubiA RPA1153 - prenyltransferase 1149 67.43 0 1261793..1262317 - 174 39934229 - RPA1154 - hypothetical protein 1150 67.67 0 1262616..1264013 + 465 39934230 - RPA1155 - peptidase U62, modulator of DNA gyrase 1151 65.86 0 1264072..1264815 + 247 39934231 - RPA1156 - putative myo-inositol monophosphatase 2 family protein 1152 57.83 -2 1264853..1265101 + 82 39934232 - RPA1157 - hypothetical protein 1153 67.66 0 1265171..1266475 + 434 39934233 - RPA1158 - three-deoxy-D-manno-octulosonic-acid transferase-like 1154 70.28 +1 1266468..1267490 + 340 39934234 lpxK RPA1159 - tetraacyldisaccharide 4'-kinase 1155 59.52 -1 1267500..1267835 - 111 39934235 - RPA1160 - hypothetical protein 1156 70.38 +1 1267876..1269489 - 537 39934236 xseA RPA1161 - exodeoxyribonuclease VII large subunit 1157 67.76 0 1269727..1271010 + 427 39934237 garS RPA1162 - phosphoribosylamine--glycine ligase 1158 64.69 0 1271174..1272082 + 302 39934238 - RPA1163 - epoxide hydrolase 1159 68.68 +1 1272066..1272512 - 148 39934239 - RPA1164 - CMP/dCMP deaminase, zinc-binding 1160 70.54 +1 1272678..1274873 + 731 39934240 - RPA1165 - pseudouridine synthase Rsu 1161 67.18 0 1275097..1275678 + 193 39934241 - RPA1166 - N-6 adenine-specific DNA methylase 1162 66.76 0 1275882..1276904 - 340 39934242 yfcB RPA1167 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1163 67.95 0 1276904..1277371 - 155 39934243 moaE RPA1168 - molybdopterin biosynthesis MoaE 1164 67.86 0 1277397..1277648 - 83 39934244 moaD RPA1169 - molybdopterin converting factor, subunit 1 1165 65.07 0 1277645..1278271 - 208 39934245 pgsA RPA1170 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1166 67.99 0 1278411..1280525 - 704 39934246 uvrC RPA1171 - excinuclease ABC subunit C 1167 63.44 0 1280779..1281459 + 226 39934247 - RPA1172 - outer membrane protein 1168 58.62 -2 1281878..1282138 - 86 39934248 cspA1 RPA1173 - cold-shock DNA-binding domain protein 1169 69.00 +1 1282367..1283224 - 285 39934249 - RPA1174 - hypothetical protein 1170 57.07 -2 1283518..1283913 + 131 39934250 - RPA1175 - response regulator receiver (CheY-like protein) 1171 67.93 0 1283999..1284394 - 131 39934251 - RPA1176 - hypothetical protein 1172 63.24 0 1284607..1284810 - 67 39934252 - RPA1177 - 4-oxalocrotonate tautomerase 1173 63.74 0 1284950..1286521 - 523 39934253 hisS RPA1178 - histidyl-tRNA synthetase 1174 65.70 0 1286629..1288083 + 484 39934254 - RPA1179 - beta alanine--pyruvate transaminase 1175 68.14 0 1288180..1289745 + 521 39934255 - RPA1180 - putative cylclic diguanylate phosphodiesterase (EAL) 1176 66.55 0 1289758..1290612 + 284 39934256 - RPA1181 - HAD-superfamily hydrolase, subfamily IIA 1177 68.27 0 1290644..1292707 - 687 39934257 - RPA1182 - hypothetical protein 1178 70.28 +1 1292874..1295699 - 941 39934258 - RPA1183 - double-transmembrane region-like 1179 68.60 +1 1295696..1296628 - 310 39934259 - RPA1184 - hypothetical protein 1180 66.94 0 1296628..1297731 - 367 39934260 - RPA1185 - ATPase 1181 65.03 0 1297866..1298477 + 203 39934261 - RPA1186 - hypothetical protein 1182 64.41 0 1298486..1299151 + 221 39934262 - RPA1187 - NUDIX hydrolase 1183 69.93 +1 1299408..1300664 + 418 39934263 - RPA1188 - polynucleotide adenylyltransferase region 1184 60.53 -1 1300794..1301021 - 75 39934264 - RPA1189 - hypothetical protein 1185 65.40 0 1301099..1301731 - 210 39934265 - RPA1190 - hypothetical protein 1186 59.87 -1 1301742..1302197 - 151 39934266 - RPA1191 - putative RNA methyltransferase 1187 62.84 0 1302375..1303001 + 208 39934267 - RPA1192 - cytochrome b6-F complex iron-sulfur subunit 1188 63.38 0 1303042..1305108 + 688 39934268 - RPA1193 - cytochrome c1 1189 64.74 0 1305267..1305941 + 224 39934269 - RPA1194 - carboxymethylenebutenolidase 1190 67.44 0 1306424..1307200 - 258 39934270 fixR1 RPA1195 - short-chain dehydrogenase 1191 63.85 0 1307197..1307835 - 212 39934271 pdxH RPA1196 - pyridoxamine 5'-phosphate oxidase 1192 68.61 +1 1307959..1308369 + 136 39934272 - RPA1197 - hypothetical protein 1193 65.94 0 1308489..1309457 + 322 39934273 - RPA1198 - putative heat shock protein DnaJ 1194 64.11 0 1309856..1310677 + 273 39934274 - RPA1199 - enoyl-(acyl carrier protein) reductase 1195 70.71 +1 1310785..1311378 + 197 39934275 - RPA1200 - phosphoglycerate mutase 1196 67.31 0 1311494..1312582 + 362 39934276 aroC RPA1201 - chorismate synthase 1197 66.50 0 1312686..1313885 + 399 39934277 - RPA1202 - putative adenylate/guanylate cyclase 1198 62.82 0 1314063..1314374 - 103 161610776 clpS RPA1203 - ATP-dependent Clp protease adaptor 1199 63.44 0 1314621..1315457 + 278 39934279 - RPA1204 - hypothetical protein 1200 65.62 0 1315582..1316733 - 383 39934280 - RPA1205 - putative alcohol dehydrogenase 1201 64.43 0 1316922..1318442 - 506 39934281 - RPA1206 - aldehyde dehydrogenase 1202 69.58 +1 1318680..1320569 + 629 39934282 - RPA1207 - sigma-54-dependent transcriptional regulator 1203 66.31 0 1320610..1322013 - 467 39934283 - RPA1208 - carotenoid oxygenase 1204 68.55 +1 1322055..1323434 - 459 39934284 - RPA1209 - hypothetical protein 1205 66.04 0 1323427..1324536 - 369 39934285 - RPA1210 - hypothetical protein 1206 66.95 0 1324555..1325616 - 353 39934286 - RPA1211 - hypothetical protein 1207 64.06 0 1325781..1326776 - 331 39934287 - RPA1212 - Alpha/beta hydrolase fold 1208 66.53 0 1326998..1328503 - 501 39934288 - RPA1213 - hypothetical protein 1209 67.82 0 1328639..1330291 - 550 39934289 - RPA1214 - putative ABC transporter ATP-binding protein 1210 66.78 0 1330400..1331290 - 296 39934290 - RPA1215 - putative ABC transporter, permease protein 1211 65.29 0 1331304..1332245 - 313 39934291 - RPA1216 - putative ABC transporter, permease protein 1212 67.11 0 1332410..1333540 - 376 39934292 - RPA1217 - carboxypeptidase 1213 64.62 0 1333792..1335405 + 537 39934293 - RPA1218 - putative ABC transporter periplasmic protein 1214 68.51 +1 1335945..1336595 - 216 39934294 - RPA1219 - hypothetical protein 1215 66.86 0 1337065..1338081 + 338 39934295 - RPA1220 - CBS domain-containing protein 1216 65.40 0 1338132..1338923 - 263 39934296 - RPA1221 - hypothetical protein 1217 66.28 0 1338952..1339974 - 340 39934297 - RPA1222 - hypothetical protein 1218 66.98 0 1339991..1340314 - 107 39934298 - RPA1223 - hypothetical protein 1219 64.81 0 1340580..1342406 + 608 39934299 iorA RPA1224 - putative indolepyruvate ferredoxin oxidoreductase, alpha subunit 1220 65.67 0 1342448..1343347 + 299 39934300 - RPA1225 - pyruvate ferredoxin/flavodoxin oxidoreductase 4Fe-4S binding subunit 1221 67.01 0 1343344..1344507 + 387 39934301 - RPA1226 - 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1222 66.43 0 1344509..1345339 + 276 39934302 oorB RPA1227 - 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1223 65.60 0 1345354..1345914 + 186 39934303 - RPA1228 - pyruvate ferredoxin/flavodoxin oxidoreductase 1224 65.39 0 1345938..1347272 + 444 39934304 - RPA1229 - phenylacetate--CoA ligase 1225 63.23 0 1347482..1348354 + 290 39934305 - RPA1230 - putative ABC transporter, permease protein 1226 63.44 0 1348357..1349502 + 381 39934306 - RPA1231 - ABC transporter permease 1227 63.78 0 1349499..1350260 + 253 39934307 - RPA1232 - putative branched-chain amino acid transport system ATP-binding protein 1228 62.53 0 1350264..1351013 + 249 39934308 - RPA1233 - putative branched-chain amino acid transport system ATP-binding protein 1229 70.14 +1 1350997..1352697 + 566 39934309 - RPA1234 - long-chain-fatty-acid--CoA ligase 1230 61.69 -1 1352737..1353942 + 401 39934310 - RPA1235 - leucine-binding protein (LBP) 1231 65.66 0 1354133..1355329 - 398 39934311 - RPA1236 - putative acyl-CoA dehydrogenase 1232 68.16 0 1355348..1356484 - 378 39934312 - RPA1237 - acyl-CoA dehydrogenase 1233 63.37 0 1356488..1357336 - 282 39934313 - RPA1238 - enoyl-CoA hydratase 1234 68.19 0 1357474..1358460 + 328 39934314 exbB1 RPA1239 - putative biopolymer transport protein ExbB 1235 66.44 0 1358465..1358902 + 145 39934315 exbD1 RPA1240 - biopolymer transport protein ExbD 1236 69.99 +1 1358899..1359771 + 290 39934316 - RPA1241 - tonB transport protein 1237 66.01 0 1359791..1361302 - 503 39934317 fadD1 RPA1242 - AMP-dependent synthetase and ligase 1238 66.58 0 1361637..1362803 + 388 39934318 - RPA1243 - late embryogenesis abundant protein 1239 64.69 0 1362819..1363424 + 201 39934319 - RPA1244 - hypothetical protein 1240 60.56 -1 1363411..1363803 + 130 39934320 - RPA1245 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0