version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1073 67.77 0 1186379..1187281 + 300 39934153 - RPA1078 - AraC family transcriptional regulator 1074 66.51 0 1187407..1188693 + 428 39934154 - RPA1079 - 4-methylmuconolactone transporter 1075 67.00 0 1188686..1189588 + 300 39934155 - RPA1080 - 2-pyrone-4,6-dicarboxylate hydrolase 1076 66.51 0 1189896..1190549 - 217 39934156 - RPA1081 - hypothetical protein 1077 58.05 -2 1190900..1192234 + 444 39934157 - RPA1082 - hypothetical protein 1078 64.49 0 1192349..1192669 + 106 39934158 - RPA1083 - hypothetical protein 1079 63.21 0 1192666..1193157 + 163 39934159 csgB RPA1084 - minor curlin subunit precursor (fimbrin sef17 minor subunit) 1080 65.95 0 1193154..1193570 + 138 39934160 - RPA1085 - hypothetical protein 1081 64.58 0 1193607..1194563 + 318 39934161 csgG RPA1086 - curli production assembly/transport component csgg precursor 1082 71.82 +2 1194566..1195360 + 264 39934162 - RPA1087 - transglycosylase SLT domain-containing protein 1083 59.00 -1 1195392..1195730 - 112 39934163 - RPA1088 - hypothetical protein 1084 60.92 -1 1195939..1196199 + 86 39934164 - RPA1089 - hypothetical protein 1085 68.14 0 1196347..1197024 + 225 39934165 - RPA1090 - Crp/Fnr family transcriptional regulator 1086 62.96 0 1197140..1197328 + 62 39934166 - RPA1091 - hypothetical protein 1087 65.86 0 1197405..1197776 + 123 39934167 - RPA1092 - carboxymuconolactone decarboxylase 1088 64.59 0 1197881..1198990 + 369 39934168 ribB RPA1093 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1089 64.36 0 1199051..1200265 + 404 39934169 - RPA1094 - glutaryl-CoA dehydrogenase 1090 65.24 0 1200414..1201391 + 325 39934170 - RPA1095 - Beta-lactamase-like 1091 67.64 0 1201404..1203155 - 583 39934171 - RPA1096 - methyl-accepting chemotaxis sensory transducer 1092 63.45 0 1203352..1204098 + 248 39934172 - RPA1097 - hypothetical protein 1093 60.46 -1 1204145..1204450 - 101 39934173 - RPA1098 - hypothetical protein 1094 69.33 +1 1204649..1205173 + 174 39934174 ruvC RPA1099 - Holliday junction resolvase 1095 66.02 0 1205358..1205975 + 205 39934175 ruvA RPA1100 - Holliday junction DNA helicase motor protein 1096 66.20 0 1205972..1206397 + 141 39934176 - RPA1101 - hypothetical protein 1097 67.52 0 1206575..1207624 + 349 39934177 ruvB RPA1102 - Holliday junction DNA helicase B 1098 61.51 -1 1207632..1208096 + 154 39934178 - RPA1103 - 4-hydroxybenzoyl-CoA thioesterase 1099 65.45 0 1208196..1209506 + 436 39934179 ndh RPA1104 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1100 62.96 0 1209652..1210866 + 404 39934180 - RPA1105 - OpgC protein, require for succinylation of osmoregulated periplasmic glucans 1101 66.03 0 1210924..1211391 + 155 39934181 - RPA1106 - hypothetical protein 1102 67.21 0 1211408..1211956 + 182 39934182 - RPA1107 - TetR family transcriptional regulator 1103 65.43 0 1212076..1212480 + 134 39934183 - RPA1108 - DGPF domain-containing protein 1104 68.79 +1 1212477..1213745 + 422 39934184 - RPA1109 - RNA polymerase ECF-type sigma factor 1105 67.43 0 1213766..1214554 - 262 39934185 - RPA1110 - putative 3-oxoacyl-acyl carrier protein reductase 1106 62.55 0 1215047..1215313 - 88 39934186 - RPA1111 - hypothetical protein 1107 63.57 0 1215473..1215892 + 139 39934187 - RPA1112 - DGPF domain-containing protein 1108 67.52 0 1216030..1216734 + 234 39934188 - RPA1113 - TetR family transcriptional regulator 1109 63.89 0 1216877..1217344 + 155 39934189 - RPA1114 - hypothetical protein 1110 63.03 0 1217494..1217961 + 155 39934190 - RPA1115 - hypothetical protein 1111 68.10 0 1217945..1218850 + 301 39934191 - RPA1116 - RNA polymerase sigma factor SigJ 1112 63.71 0 1219157..1219867 + 236 39934192 TolQ RPA1117 - MotA/TolQ/ExbB proton channel 1113 62.63 0 1219902..1220372 + 156 39934193 TolR RPA1118 - putative tolR protein, uptake of enterochelin; tonB-dependent uptake of B colicins 1114 63.21 0 1220421..1221404 + 327 39934194 TolA RPA1119 - putative TolA 1115 65.39 0 1221477..1222811 + 444 39934195 tolB RPA1120 - translocation protein TolB 1116 61.48 -1 1222982..1225312 + 776 39934196 - RPA1121 - putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) 1117 56.93 -2 1225507..1226256 + 249 39934197 - RPA1122 - hypothetical protein 1118 65.66 0 1226585..1227082 + 165 39934198 - RPA1123 - OmpA/MotB 1119 68.79 +1 1227238..1228275 + 345 39934199 - RPA1124 - hypothetical protein 1120 69.55 +1 1228330..1229370 + 346 39934200 - RPA1125 - tRNA(Ile)-lysidine synthetase-like 1121 65.31 0 1229602..1231518 + 638 39934201 ftsH RPA1126 - ATP-dependent metalloprotease FtsH 1122 64.67 0 1231651..1232400 + 249 39934202 - RPA1127 - AzlC-like protein 1123 66.35 0 1232397..1232714 + 105 39934203 - RPA1128 - branched chain amino acid ABC transporter 1124 68.05 0 1232997..1233575 + 192 39934204 - RPA1129 - TetR family transcriptional regulator 1125 63.72 0 1233699..1235192 + 497 39934205 glcD RPA1130 - glycolate oxidase subunit GlcD 1126 68.04 0 1235355..1236596 + 413 39934206 - RPA1131 - FAD linked oxidase-like 1127 63.39 0 1236593..1237906 + 437 39934207 glcF RPA1132 - glycolate oxidase subunit, (Fe-S)protein, GlcF 1128 66.13 0 1237981..1238919 + 312 39934208 - RPA1133 - hypothetical protein 1129 61.32 -1 1239338..1240309 + 323 39934209 - RPA1134 - hypothetical protein 1130 65.93 0 1240568..1242328 - 586 39934210 - RPA1135 - ABC transporter permease/ATP-binding protein 1131 63.60 0 1242599..1244263 + 554 39934211 ictP RPA1136 - putative L-lactate permease 1132 64.75 0 1244408..1244824 + 138 39934212 - RPA1137 - hypothetical protein 1133 69.06 +1 1244827..1246332 - 501 39934213 - RPA1138 - FAD dependent oxidoreductase 1134 66.42 0 1246445..1247638 - 397 39934214 - RPA1139 - hypothetical protein 1135 65.69 0 1247853..1249496 - 547 39934215 groEL RPA1140 - chaperonin GroEL 1136 61.28 -1 1249536..1249832 - 98 39934216 groES RPA1141 - co-chaperonin GroES 1137 66.67 0 1250132..1250647 + 171 39934217 - RPA1142 - hypothetical protein 1138 69.31 +1 1250691..1251899 + 402 39934218 - RPA1143 - major facilitator transporter 1139 61.62 -1 1251915..1252706 - 263 39934219 - RPA1144 - hypothetical protein 1140 64.55 0 1252992..1253795 + 267 39934220 - RPA1145 - ErfK/YbiS/YcfS/YnhG 1141 69.12 +1 1253883..1254737 - 284 39934221 - RPA1146 - putative periplasmic ligand-binding sensor protein 1142 66.89 0 1254853..1255746 - 297 39934222 - RPA1147 - hypothetical protein 1143 66.86 0 1255743..1256786 - 347 39934223 - RPA1148 - glycosyl transferase, family 2 1144 68.40 +1 1256880..1257857 - 325 39934224 hisG RPA1149 - ATP phosphoribosyltransferase 1145 69.45 +1 1257854..1259002 - 382 39934225 hisZ RPA1150 - ATP phosphoribosyltransferase regulatory subunit 1146 69.97 +1 1259147..1259902 - 251 39934226 - RPA1151 - hypothetical protein 1147 67.79 0 1260277..1260810 + 177 39934227 - RPA1152 - hypothetical protein 1148 65.09 0 1260807..1261757 + 316 39934228 ubiA RPA1153 - prenyltransferase 1149 67.43 0 1261793..1262317 - 174 39934229 - RPA1154 - hypothetical protein 1150 67.67 0 1262616..1264013 + 465 39934230 - RPA1155 - peptidase U62, modulator of DNA gyrase 1151 65.86 0 1264072..1264815 + 247 39934231 - RPA1156 - putative myo-inositol monophosphatase 2 family protein 1152 57.83 -2 1264853..1265101 + 82 39934232 - RPA1157 - hypothetical protein 1153 67.66 0 1265171..1266475 + 434 39934233 - RPA1158 - three-deoxy-D-manno-octulosonic-acid transferase-like 1154 70.28 +1 1266468..1267490 + 340 39934234 lpxK RPA1159 - tetraacyldisaccharide 4'-kinase 1155 59.52 -1 1267500..1267835 - 111 39934235 - RPA1160 - hypothetical protein 1156 70.38 +1 1267876..1269489 - 537 39934236 xseA RPA1161 - exodeoxyribonuclease VII large subunit 1157 67.76 0 1269727..1271010 + 427 39934237 garS RPA1162 - phosphoribosylamine--glycine ligase 1158 64.69 0 1271174..1272082 + 302 39934238 - RPA1163 - epoxide hydrolase 1159 68.68 +1 1272066..1272512 - 148 39934239 - RPA1164 - CMP/dCMP deaminase, zinc-binding 1160 70.54 +1 1272678..1274873 + 731 39934240 - RPA1165 - pseudouridine synthase Rsu 1161 67.18 0 1275097..1275678 + 193 39934241 - RPA1166 - N-6 adenine-specific DNA methylase 1162 66.76 0 1275882..1276904 - 340 39934242 yfcB RPA1167 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1163 67.95 0 1276904..1277371 - 155 39934243 moaE RPA1168 - molybdopterin biosynthesis MoaE 1164 67.86 0 1277397..1277648 - 83 39934244 moaD RPA1169 - molybdopterin converting factor, subunit 1 1165 65.07 0 1277645..1278271 - 208 39934245 pgsA RPA1170 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1166 67.99 0 1278411..1280525 - 704 39934246 uvrC RPA1171 - excinuclease ABC subunit C 1167 63.44 0 1280779..1281459 + 226 39934247 - RPA1172 - outer membrane protein 1168 58.62 -2 1281878..1282138 - 86 39934248 cspA1 RPA1173 - cold-shock DNA-binding domain protein 1169 69.00 +1 1282367..1283224 - 285 39934249 - RPA1174 - hypothetical protein 1170 57.07 -2 1283518..1283913 + 131 39934250 - RPA1175 - response regulator receiver (CheY-like protein) 1171 67.93 0 1283999..1284394 - 131 39934251 - RPA1176 - hypothetical protein 1172 63.24 0 1284607..1284810 - 67 39934252 - RPA1177 - 4-oxalocrotonate tautomerase 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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