version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1047 66.74 0 1159062..1160492 + 476 39934127 - RPA1052 - cell wall hydrolase, SleB 1048 68.26 0 1161049..1161924 - 291 39934128 nadC RPA1053 - nicotinate-nucleotide pyrophosphorylase 1049 71.06 +1 1161941..1163557 - 538 39934129 nadB RPA1054 - L-aspartate oxidase 1050 64.24 0 1163651..1164763 - 370 39934130 nadA RPA1055 - quinolinate synthetase 1051 66.46 0 1165116..1166102 + 328 39934131 - RPA1056 - putative dehydrogenase (zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase) 1052 65.44 0 1166217..1166786 + 189 39934132 - RPA1057 - hypothetical protein 1053 66.03 0 1167398..1168333 + 311 39934133 - RPA1058 - AraC family transcriptional regulator 1054 62.56 0 1168419..1170635 + 738 39934134 - RPA1059 - outer membrane protein, TonB-dependent receptor 1055 64.19 0 1170643..1171086 + 147 39934135 - RPA1060 - hypothetical protein 1056 67.02 0 1171079..1171933 + 284 39934136 tcmP RPA1061 - polyketide synthesis protein 1057 68.72 +1 1171930..1174602 - 890 39934137 - RPA1062 - hypothetical protein 1058 69.48 +1 1174654..1175649 - 331 39934138 - RPA1063 - hypothetical protein 1059 66.27 0 1175646..1176152 - 168 39934139 - RPA1064 - hypothetical protein 1060 66.18 0 1176219..1176836 - 205 39934140 - RPA1065 - metal dependent phosphohydrolase 1061 61.17 -1 1176912..1177184 + 90 39934141 - RPA1066 - hypothetical protein 1062 63.77 0 1177191..1177847 - 218 39934142 tag RPA1067 - DNA-3-methyladenine glycosylase I 1063 67.57 0 1177844..1178725 - 293 39934143 - RPA1068 - glycine cleavage T protein (aminomethyl transferase) 1064 65.77 0 1178873..1180207 + 444 39934144 pyrC RPA1069 - dihydroorotase 1065 61.54 -1 1180716..1180871 + 51 39934145 - RPA1070 - hypothetical protein 1066 63.26 0 1180892..1181155 - 87 39934146 - RPA1071 - hypothetical protein 1067 67.57 0 1181286..1181726 - 146 39934147 - RPA1072 - hypothetical protein 1068 69.66 +1 1181726..1182160 - 144 39934148 - RPA1073 - NUDIX hydrolase 1069 61.90 -1 1182166..1182522 - 118 39934149 - RPA1074 - hypothetical protein 1070 67.96 0 1182725..1183498 + 257 39934150 - RPA1075 - hypothetical protein 1071 66.11 0 1183607..1185034 - 475 39934151 - RPA1076 - FAD linked oxidase-like 1072 68.77 +1 1185153..1186199 - 348 39934152 - RPA1077 - SUA5/yciO/yrdC domain-containing protein 1073 67.77 0 1186379..1187281 + 300 39934153 - RPA1078 - AraC family transcriptional regulator 1074 66.51 0 1187407..1188693 + 428 39934154 - RPA1079 - 4-methylmuconolactone transporter 1075 67.00 0 1188686..1189588 + 300 39934155 - RPA1080 - 2-pyrone-4,6-dicarboxylate hydrolase 1076 66.51 0 1189896..1190549 - 217 39934156 - RPA1081 - hypothetical protein 1077 58.05 -2 1190900..1192234 + 444 39934157 - RPA1082 - hypothetical protein 1078 64.49 0 1192349..1192669 + 106 39934158 - RPA1083 - hypothetical protein 1079 63.21 0 1192666..1193157 + 163 39934159 csgB RPA1084 - minor curlin subunit precursor (fimbrin sef17 minor subunit) 1080 65.95 0 1193154..1193570 + 138 39934160 - RPA1085 - hypothetical protein 1081 64.58 0 1193607..1194563 + 318 39934161 csgG RPA1086 - curli production assembly/transport component csgg precursor 1082 71.82 +2 1194566..1195360 + 264 39934162 - RPA1087 - transglycosylase SLT domain-containing protein 1083 59.00 -1 1195392..1195730 - 112 39934163 - RPA1088 - hypothetical protein 1084 60.92 -1 1195939..1196199 + 86 39934164 - RPA1089 - hypothetical protein 1085 68.14 0 1196347..1197024 + 225 39934165 - RPA1090 - Crp/Fnr family transcriptional regulator 1086 62.96 0 1197140..1197328 + 62 39934166 - RPA1091 - hypothetical protein 1087 65.86 0 1197405..1197776 + 123 39934167 - RPA1092 - carboxymuconolactone decarboxylase 1088 64.59 0 1197881..1198990 + 369 39934168 ribB RPA1093 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1089 64.36 0 1199051..1200265 + 404 39934169 - RPA1094 - glutaryl-CoA dehydrogenase 1090 65.24 0 1200414..1201391 + 325 39934170 - RPA1095 - Beta-lactamase-like 1091 67.64 0 1201404..1203155 - 583 39934171 - RPA1096 - methyl-accepting chemotaxis sensory transducer 1092 63.45 0 1203352..1204098 + 248 39934172 - RPA1097 - hypothetical protein 1093 60.46 -1 1204145..1204450 - 101 39934173 - RPA1098 - hypothetical protein 1094 69.33 +1 1204649..1205173 + 174 39934174 ruvC RPA1099 - Holliday junction resolvase 1095 66.02 0 1205358..1205975 + 205 39934175 ruvA RPA1100 - Holliday junction DNA helicase motor protein 1096 66.20 0 1205972..1206397 + 141 39934176 - RPA1101 - hypothetical protein 1097 67.52 0 1206575..1207624 + 349 39934177 ruvB RPA1102 - Holliday junction DNA helicase B 1098 61.51 -1 1207632..1208096 + 154 39934178 - RPA1103 - 4-hydroxybenzoyl-CoA thioesterase 1099 65.45 0 1208196..1209506 + 436 39934179 ndh RPA1104 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1100 62.96 0 1209652..1210866 + 404 39934180 - RPA1105 - OpgC protein, require for succinylation of osmoregulated periplasmic glucans 1101 66.03 0 1210924..1211391 + 155 39934181 - RPA1106 - hypothetical protein 1102 67.21 0 1211408..1211956 + 182 39934182 - RPA1107 - TetR family transcriptional regulator 1103 65.43 0 1212076..1212480 + 134 39934183 - RPA1108 - DGPF domain-containing protein 1104 68.79 +1 1212477..1213745 + 422 39934184 - RPA1109 - RNA polymerase ECF-type sigma factor 1105 67.43 0 1213766..1214554 - 262 39934185 - RPA1110 - putative 3-oxoacyl-acyl carrier protein reductase 1106 62.55 0 1215047..1215313 - 88 39934186 - RPA1111 - hypothetical protein 1107 63.57 0 1215473..1215892 + 139 39934187 - RPA1112 - DGPF domain-containing protein 1108 67.52 0 1216030..1216734 + 234 39934188 - RPA1113 - TetR family transcriptional regulator 1109 63.89 0 1216877..1217344 + 155 39934189 - RPA1114 - hypothetical protein 1110 63.03 0 1217494..1217961 + 155 39934190 - RPA1115 - hypothetical protein 1111 68.10 0 1217945..1218850 + 301 39934191 - RPA1116 - RNA polymerase sigma factor SigJ 1112 63.71 0 1219157..1219867 + 236 39934192 TolQ RPA1117 - MotA/TolQ/ExbB proton channel 1113 62.63 0 1219902..1220372 + 156 39934193 TolR RPA1118 - putative tolR protein, uptake of enterochelin; tonB-dependent uptake of B colicins 1114 63.21 0 1220421..1221404 + 327 39934194 TolA RPA1119 - putative TolA 1115 65.39 0 1221477..1222811 + 444 39934195 tolB RPA1120 - translocation protein TolB 1116 61.48 -1 1222982..1225312 + 776 39934196 - RPA1121 - putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) 1117 56.93 -2 1225507..1226256 + 249 39934197 - RPA1122 - hypothetical protein 1118 65.66 0 1226585..1227082 + 165 39934198 - RPA1123 - OmpA/MotB 1119 68.79 +1 1227238..1228275 + 345 39934199 - RPA1124 - hypothetical protein 1120 69.55 +1 1228330..1229370 + 346 39934200 - RPA1125 - tRNA(Ile)-lysidine synthetase-like 1121 65.31 0 1229602..1231518 + 638 39934201 ftsH RPA1126 - ATP-dependent metalloprotease FtsH 1122 64.67 0 1231651..1232400 + 249 39934202 - RPA1127 - AzlC-like protein 1123 66.35 0 1232397..1232714 + 105 39934203 - RPA1128 - branched chain amino acid ABC transporter 1124 68.05 0 1232997..1233575 + 192 39934204 - RPA1129 - TetR family transcriptional regulator 1125 63.72 0 1233699..1235192 + 497 39934205 glcD RPA1130 - glycolate oxidase subunit GlcD 1126 68.04 0 1235355..1236596 + 413 39934206 - RPA1131 - FAD linked oxidase-like 1127 63.39 0 1236593..1237906 + 437 39934207 glcF RPA1132 - glycolate oxidase subunit, (Fe-S)protein, GlcF 1128 66.13 0 1237981..1238919 + 312 39934208 - RPA1133 - hypothetical protein 1129 61.32 -1 1239338..1240309 + 323 39934209 - RPA1134 - hypothetical protein 1130 65.93 0 1240568..1242328 - 586 39934210 - RPA1135 - ABC transporter permease/ATP-binding protein 1131 63.60 0 1242599..1244263 + 554 39934211 ictP RPA1136 - putative L-lactate permease 1132 64.75 0 1244408..1244824 + 138 39934212 - RPA1137 - hypothetical protein 1133 69.06 +1 1244827..1246332 - 501 39934213 - RPA1138 - FAD dependent oxidoreductase 1134 66.42 0 1246445..1247638 - 397 39934214 - RPA1139 - hypothetical protein 1135 65.69 0 1247853..1249496 - 547 39934215 groEL RPA1140 - chaperonin GroEL 1136 61.28 -1 1249536..1249832 - 98 39934216 groES RPA1141 - co-chaperonin GroES 1137 66.67 0 1250132..1250647 + 171 39934217 - RPA1142 - hypothetical protein 1138 69.31 +1 1250691..1251899 + 402 39934218 - RPA1143 - major facilitator transporter 1139 61.62 -1 1251915..1252706 - 263 39934219 - RPA1144 - hypothetical protein 1140 64.55 0 1252992..1253795 + 267 39934220 - RPA1145 - ErfK/YbiS/YcfS/YnhG 1141 69.12 +1 1253883..1254737 - 284 39934221 - RPA1146 - putative periplasmic ligand-binding sensor protein 1142 66.89 0 1254853..1255746 - 297 39934222 - RPA1147 - hypothetical protein 1143 66.86 0 1255743..1256786 - 347 39934223 - RPA1148 - glycosyl transferase, family 2 1144 68.40 +1 1256880..1257857 - 325 39934224 hisG RPA1149 - ATP phosphoribosyltransferase 1145 69.45 +1 1257854..1259002 - 382 39934225 hisZ RPA1150 - ATP phosphoribosyltransferase regulatory subunit 1146 69.97 +1 1259147..1259902 - 251 39934226 - RPA1151 - hypothetical protein 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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