version 1.0
Rhodopseudomonas palustris CGA009, complete genome - 1..5459213 4813 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1000 65.90 0 1107364..1108014 + 216 39934080 - RPA1005 - NUDIX hydrolase 1001 64.18 0 1108128..1108529 + 133 39934081 - RPA1006 - protocatechuate 4,5-dioxygenase subunit alpha 1002 65.27 0 1108545..1109402 + 285 39934082 mhpB RPA1007 - protocatechuate 4,5-dioxygenase subunit beta 1003 65.88 0 1109469..1110359 - 296 39934083 - RPA1008 - AraC family transcriptional regulator 1004 66.16 0 1110510..1111697 + 395 39934084 - RPA1009 - cytochrome P450 1005 65.54 0 1111734..1113680 - 648 39934085 - RPA1010 - Beta-lactamase-like protein 1006 64.37 0 1113940..1114593 + 217 39934086 - RPA1011 - DSBA oxidoreductase 1007 64.44 0 1114724..1115488 + 254 39934087 - RPA1012 - integral membrane protein 1008 64.86 0 1115514..1116956 - 480 39934088 fixG RPA1013 - nitrogen fixation protein FixG 1009 60.54 -1 1117075..1117368 - 97 39934089 - RPA1014 - hypothetical protein 1010 67.17 0 1117580..1118170 + 196 39934090 - RPA1015 - PadR family transcriptional regulator 1011 66.67 0 1118259..1118792 + 177 39934091 petA RPA1016 - ubiquinol-cytochrome-c reductase, Rieske iron-sulfur protein 1012 66.67 0 1119042..1119434 + 130 39934092 - RPA1017 - nitrogen fixation-related protein 1013 62.69 0 1119616..1119816 - 66 39934093 - RPA1018 - hypothetical protein 1014 63.45 0 1119897..1120238 + 113 39934094 - RPA1019 - NolR/HlyU transcriptional regulator 1015 66.67 0 1120240..1121235 + 331 39934095 - RPA1020 - secretion protein HlyD 1016 65.58 0 1121232..1124456 + 1074 39934096 - RPA1021 - AcrB/AcrD/AcrF family transporter 1017 64.68 0 1124518..1125171 + 217 39934097 - RPA1022 - outer membrane protein 1018 66.03 0 1125380..1125691 + 103 39934098 - RPA1023 - hypothetical protein 1019 67.46 0 1125696..1126958 + 420 39934099 - RPA1024 - putative oxidoreductase 1020 63.93 0 1126955..1127320 + 121 39934100 - RPA1025 - cytochrome b5 1021 62.33 0 1127420..1128550 - 376 39934101 - RPA1026 - DNA methylase N-4/N-6 1022 65.90 0 1128929..1129846 + 305 39934102 - RPA1027 - hypothetical protein 1023 64.66 0 1129985..1130533 + 182 39934103 moaB RPA1028 - molybdopterin biosynthesis, protein B 1024 66.80 0 1130697..1131464 + 255 39934104 - RPA1029 - CoA transferase, subunit A 1025 66.67 0 1131461..1132213 + 250 39934105 - RPA1030 - CoA transferase, subunit B 1026 66.67 0 1132371..1133378 - 335 39934106 - RPA1031 - MarR family transcriptional regulator 1027 70.90 +1 1133477..1134043 - 188 39934107 - RPA1032 - glycosyl transferase family protein 1028 66.06 0 1134224..1135384 + 386 39934108 - RPA1033 - radical SAM family protein 1029 67.87 0 1135479..1136393 + 304 39934109 rnh2 RPA1034 - ribonuclease H 1030 69.95 +1 1136390..1137973 + 527 39934110 - RPA1035 - hypothetical protein 1031 70.76 +1 1138032..1138862 - 276 39934111 polN RPA1036 - phage SPO1 DNA polymerase-related protein 1032 63.53 0 1139064..1140722 + 552 39934112 - RPA1037 - electron-transferring-flavoprotein dehydrogenase 1033 64.65 0 1140980..1142764 + 594 39934113 - RPA1038 - TPR repeat-containing protein 1034 71.89 +2 1142869..1143768 + 299 39934114 ispE RPA1039 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 1035 66.17 0 1143914..1144924 - 336 39934115 - RPA1040 - farnesyltranstransferase 1036 66.67 0 1145132..1145359 + 75 39934116 - RPA1041 - hypothetical protein 1037 69.49 +1 1145352..1146131 + 259 39934117 - RPA1042 - methyltransferase small 1038 66.45 0 1146377..1147279 + 300 39934118 - RPA1043 - peptidase S49 1039 68.27 0 1147380..1147691 - 103 39934119 - RPA1044 - hypothetical protein 1040 64.77 0 1147992..1148942 + 316 39934120 glyQ RPA1045 - glycyl-tRNA synthetase subunit alpha 1041 60.46 -1 1149072..1149506 + 144 39934121 - RPA1046 - hypothetical protein 1042 61.35 -1 1149506..1151836 + 776 39934122 glyS RPA1047 - glycyl-tRNA synthetase subunit beta 1043 67.30 0 1152596..1153699 + 367 39934123 - RPA1048 - hypothetical protein 1044 67.60 0 1153713..1155209 - 498 39934124 - RPA1049 - hypothetical protein 1045 53.85 -2 1155473..1155628 + 51 39934125 - RPA1050 - hypothetical protein 1046 67.14 0 1156005..1158746 + 913 39934126 - RPA1051 - pyruvate phosphate dikinase 1047 66.74 0 1159062..1160492 + 476 39934127 - RPA1052 - cell wall hydrolase, SleB 1048 68.26 0 1161049..1161924 - 291 39934128 nadC RPA1053 - nicotinate-nucleotide pyrophosphorylase 1049 71.06 +1 1161941..1163557 - 538 39934129 nadB RPA1054 - L-aspartate oxidase 1050 64.24 0 1163651..1164763 - 370 39934130 nadA RPA1055 - quinolinate synthetase 1051 66.46 0 1165116..1166102 + 328 39934131 - RPA1056 - putative dehydrogenase (zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase) 1052 65.44 0 1166217..1166786 + 189 39934132 - RPA1057 - hypothetical protein 1053 66.03 0 1167398..1168333 + 311 39934133 - RPA1058 - AraC family transcriptional regulator 1054 62.56 0 1168419..1170635 + 738 39934134 - RPA1059 - outer membrane protein, TonB-dependent receptor 1055 64.19 0 1170643..1171086 + 147 39934135 - RPA1060 - hypothetical protein 1056 67.02 0 1171079..1171933 + 284 39934136 tcmP RPA1061 - polyketide synthesis protein 1057 68.72 +1 1171930..1174602 - 890 39934137 - RPA1062 - hypothetical protein 1058 69.48 +1 1174654..1175649 - 331 39934138 - RPA1063 - hypothetical protein 1059 66.27 0 1175646..1176152 - 168 39934139 - RPA1064 - hypothetical protein 1060 66.18 0 1176219..1176836 - 205 39934140 - RPA1065 - metal dependent phosphohydrolase 1061 61.17 -1 1176912..1177184 + 90 39934141 - RPA1066 - hypothetical protein 1062 63.77 0 1177191..1177847 - 218 39934142 tag RPA1067 - DNA-3-methyladenine glycosylase I 1063 67.57 0 1177844..1178725 - 293 39934143 - RPA1068 - glycine cleavage T protein (aminomethyl transferase) 1064 65.77 0 1178873..1180207 + 444 39934144 pyrC RPA1069 - dihydroorotase 1065 61.54 -1 1180716..1180871 + 51 39934145 - RPA1070 - hypothetical protein 1066 63.26 0 1180892..1181155 - 87 39934146 - RPA1071 - hypothetical protein 1067 67.57 0 1181286..1181726 - 146 39934147 - RPA1072 - hypothetical protein 1068 69.66 +1 1181726..1182160 - 144 39934148 - RPA1073 - NUDIX hydrolase 1069 61.90 -1 1182166..1182522 - 118 39934149 - RPA1074 - hypothetical protein 1070 67.96 0 1182725..1183498 + 257 39934150 - RPA1075 - hypothetical protein 1071 66.11 0 1183607..1185034 - 475 39934151 - RPA1076 - FAD linked oxidase-like 1072 68.77 +1 1185153..1186199 - 348 39934152 - RPA1077 - SUA5/yciO/yrdC domain-containing protein 1073 67.77 0 1186379..1187281 + 300 39934153 - RPA1078 - AraC family transcriptional regulator 1074 66.51 0 1187407..1188693 + 428 39934154 - RPA1079 - 4-methylmuconolactone transporter 1075 67.00 0 1188686..1189588 + 300 39934155 - RPA1080 - 2-pyrone-4,6-dicarboxylate hydrolase 1076 66.51 0 1189896..1190549 - 217 39934156 - RPA1081 - hypothetical protein 1077 58.05 -2 1190900..1192234 + 444 39934157 - RPA1082 - hypothetical protein 1078 64.49 0 1192349..1192669 + 106 39934158 - RPA1083 - hypothetical protein 1079 63.21 0 1192666..1193157 + 163 39934159 csgB RPA1084 - minor curlin subunit precursor (fimbrin sef17 minor subunit) 1080 65.95 0 1193154..1193570 + 138 39934160 - RPA1085 - hypothetical protein 1081 64.58 0 1193607..1194563 + 318 39934161 csgG RPA1086 - curli production assembly/transport component csgg precursor 1082 71.82 +2 1194566..1195360 + 264 39934162 - RPA1087 - transglycosylase SLT domain-containing protein 1083 59.00 -1 1195392..1195730 - 112 39934163 - RPA1088 - hypothetical protein 1084 60.92 -1 1195939..1196199 + 86 39934164 - RPA1089 - hypothetical protein 1085 68.14 0 1196347..1197024 + 225 39934165 - RPA1090 - Crp/Fnr family transcriptional regulator 1086 62.96 0 1197140..1197328 + 62 39934166 - RPA1091 - hypothetical protein 1087 65.86 0 1197405..1197776 + 123 39934167 - RPA1092 - carboxymuconolactone decarboxylase 1088 64.59 0 1197881..1198990 + 369 39934168 ribB RPA1093 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1089 64.36 0 1199051..1200265 + 404 39934169 - RPA1094 - glutaryl-CoA dehydrogenase 1090 65.24 0 1200414..1201391 + 325 39934170 - RPA1095 - Beta-lactamase-like 1091 67.64 0 1201404..1203155 - 583 39934171 - RPA1096 - methyl-accepting chemotaxis sensory transducer 1092 63.45 0 1203352..1204098 + 248 39934172 - RPA1097 - hypothetical protein 1093 60.46 -1 1204145..1204450 - 101 39934173 - RPA1098 - hypothetical protein 1094 69.33 +1 1204649..1205173 + 174 39934174 ruvC RPA1099 - Holliday junction resolvase 1095 66.02 0 1205358..1205975 + 205 39934175 ruvA RPA1100 - Holliday junction DNA helicase motor protein 1096 66.20 0 1205972..1206397 + 141 39934176 - RPA1101 - hypothetical protein 1097 67.52 0 1206575..1207624 + 349 39934177 ruvB RPA1102 - Holliday junction DNA helicase B 1098 61.51 -1 1207632..1208096 + 154 39934178 - RPA1103 - 4-hydroxybenzoyl-CoA thioesterase 1099 65.45 0 1208196..1209506 + 436 39934179 ndh RPA1104 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 65.23 MEAN 3.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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