version 1.0
Rhizobium leguminosarum bv. viciae 3841, complete genome - 1..5057142 4694 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3375 60.92 0 3571006..3571353 - 115 116253145 - RL3403 - hypothetical protein 3376 62.14 0 3571363..3572400 - 345 116253146 tdh RL3404 - L-threonine 3-dehydrogenase 3377 62.04 0 3572590..3573777 - 395 116253147 kbl RL3405 - 2-amino-3-ketobutyrate coenzyme A ligase 3378 60.91 0 3573843..3574571 - 242 116253148 - RL3406 - putative biotin synthesis protein 3379 64.58 0 3574641..3576509 - 622 116253149 recQ RL3407 - putative ATP-dependent DNA helicase RecQ 3380 63.93 0 3576509..3578518 - 669 116253150 dnaG RL3408 - DNA primase 3381 61.62 0 3579189..3580079 + 296 116253151 - RL3409 - hypothetical protein 3382 60.75 0 3580083..3580538 - 151 116253152 - RL3410 - putative GatB/Yqey family protein 3383 62.94 0 3580808..3582013 + 401 161501792 carA RL3411 - carbamoyl phosphate synthase small subunit 3384 58.88 0 3582288..3582608 + 106 116253154 - RL3412 - hypothetical protein 3385 63.96 0 3582626..3584029 - 467 116253155 norM RL3413 - putative multidrug resistance protein NorM (Na(+)/drug antiporter) (multidrug-efflux transporter) 3386 64.66 0 3584172..3585416 - 414 116253156 tetA RL3414 - putative tetracycline resistance protein 3387 64.96 +1 3585812..3586807 + 331 116253157 - RL3415 - putative oxidoreductase 3388 61.78 0 3587106..3588026 - 306 116253158 - RL3416 - putative transmembrane protease protein 3389 63.01 0 3588103..3588594 - 163 116253159 - RL3417 - putative transmembrane protein 3390 63.06 0 3588681..3589457 + 258 116253160 - RL3418 - hypothetical protein 3391 63.54 0 3589727..3593215 + 1162 116253161 carB RL3419 - carbamoyl phosphate synthase large subunit 3392 62.68 0 3593271..3594725 - 484 116253162 - RL3420 - putative helicase/glycosylase 3393 60.26 0 3594725..3595957 - 410 116253163 - RL3421 - hypothetical protein 3394 61.64 0 3596211..3596687 + 158 116253164 greA RL3422 - transcription elongation factor GreA 3395 65.63 +1 3596715..3597773 + 352 116253165 - RL3423 - putative lipopolysaccharide core biosynthesis protein 3396 61.57 0 3597988..3599322 - 444 116253166 dctA RL3424 - C4-dicarboxylate transporter DctA 3397 63.14 0 3599547..3601415 + 622 116253167 dctB RL3425 - putative C4-dicarboxylate transport two-component sensor histidine kinase transcriptional regulatory protein 3398 63.03 0 3601420..3602766 + 448 116253168 dctD RL3426 - putative C4-dicarboxylate transport two-component response regulator sigma 54 transcriptional regulatory protein 3399 62.39 0 3602798..3603265 - 155 116253169 - RL3427 - AsnC family transcriptional regulator 3400 61.74 0 3603496..3604470 + 324 116253170 trxB RL3428 - putative thioredoxin reductase 3401 60.75 0 3604478..3605389 + 303 116253171 - RL3429 - LysR family transcriptional regulator 3402 58.84 0 3605944..3606237 + 97 116253172 - RL3430 - ArsR family transcriptional regulator 3403 65.47 +1 3606239..3607405 + 388 116253173 - RL3431 - MFS family transporter 3404 61.87 0 3607431..3608555 + 374 116253174 - RL3432 - putative glycerol trinitrate reductase 3405 63.17 0 3608631..3609431 + 266 116253175 str RL3433 - putative streptomycin 3''-kinase 3406 65.98 +1 3609428..3610450 - 340 116253176 - RL3434 - hypothetical protein 3407 63.86 0 3610545..3611471 + 308 116253177 - RL3435 - LysR family transcriptional regulator 3408 59.30 0 3611449..3611964 + 171 116253178 - RL3436 - hypothetical protein 3409 62.85 0 3611961..3612248 - 95 116253179 - RL3437 - hypothetical protein 3410 62.11 0 3612480..3613577 + 365 116253180 - RL3438 - putative transmembrane cation transporter 3411 60.00 0 3613688..3614557 - 289 116253181 lpcB RL3439 - putative CMP KDO transferase 3412 61.60 0 3614604..3615590 - 328 116253182 gspA RL3440 - putative general stress protein A 3413 59.43 0 3615691..3616077 - 128 116253183 - RL3441 - hypothetical protein 3414 58.24 -1 3616080..3616340 - 86 116253184 - RL3442 - hypothetical protein 3415 60.76 0 3616441..3617643 - 400 116253185 - RL3443 - aspartate aminotransferase 3416 63.49 0 3618022..3620415 + 797 116253186 - RL3444 - putative transmembrane protein 3417 63.51 0 3620483..3621178 + 231 116253187 - RL3445 - putative transmembrane sortase-like protein 3418 63.69 0 3621239..3622381 + 380 116253188 - RL3446 - putative quinoprotein glucose dehydrogenase-B 3419 61.15 0 3622386..3622856 - 156 116253189 - RL3447 - hypothetical protein 3420 62.74 0 3622955..3623845 + 296 116253190 - RL3448 - MFS family transporter 3421 58.80 0 3624333..3624548 + 71 116253191 cspA RL3449 - putative cold shock protein 3422 65.13 +1 3624690..3625145 + 151 116253192 - RL3450 - putative transmembrane protein 3423 64.99 +1 3625215..3626108 - 297 116253193 - RL3451 - putative short-chain dehydrogenase/reductase 3424 61.94 0 3626221..3626601 + 126 116253194 - RL3452 - hypothetical protein 3425 61.29 0 3626598..3627974 - 458 116253195 - RL3453 - putative two-component sensor histidine kinase transcriptional regulatory protein 3426 62.82 0 3627999..3628700 - 233 116253196 - RL3454 - putative two-component response regulator transcriptional regulatory protein 3427 58.22 -1 3628701..3629138 - 145 116253197 - RL3455 - MarR family transcriptional regulator 3428 65.19 +1 3629756..3630025 - 89 116253198 - RL3456 - putative transmembrane protein 3429 63.32 0 3630209..3630925 - 238 116253199 - RL3457 - hypothetical protein 3430 61.24 0 3631114..3631758 + 214 116253200 - RL3458 - putative beta-lactamase family protein 3431 59.94 0 3631796..3632137 - 113 116253201 csaA RL3459 - putative chaperone protein 3432 66.43 +1 3632148..3632975 - 275 116253202 proC RL3460 - pyrroline-5-carboxylate reductase 3433 58.68 0 3632977..3633477 - 166 116253203 - RL3461 - hypothetical protein 3434 62.50 0 3633825..3634184 + 119 116253204 - RL3462 - hypothetical protein 3435 63.00 0 3634359..3635177 + 272 116253205 lgt RL3463 - prolipoprotein diacylglyceryl transferase 3436 64.40 0 3635196..3636296 + 366 116253206 - RL3464 - hypothetical protein 3437 65.91 +1 3636408..3637202 + 264 116253207 - RL3465 - hypothetical protein 3438 63.54 0 3637208..3638359 + 383 116253208 - RL3466 - putative Xaa-Pro dipeptidase 3439 68.25 +2 3638451..3639272 + 273 116253209 - RL3467 - hypothetical protein 3440 60.24 0 3639378..3640310 + 310 116253210 prs RL3468 - ribose-phosphate pyrophosphokinase 3441 58.89 0 3640531..3642150 - 539 116253211 - RL3469 - hypothetical protein 3442 61.87 0 3642184..3644268 - 694 116253212 - RL3470 - putative GGDEF/EAL transmembrane sensory box protein 3443 58.46 0 3644565..3645173 + 202 116253213 - RL3471 - 50S ribosomal protein L25/general stress protein Ctc 3444 60.84 0 3645358..3647709 + 783 116253214 - RL3472 - putative GGDEF/EAL transmembrane sensory box protein 3445 60.17 0 3647726..3648448 + 240 116253215 - RL3473 - putative solute-binding component of ABC transporter 3446 62.43 0 3648639..3649370 + 243 116253216 pth RL3474 - peptidyl-tRNA hydrolase 3447 62.12 0 3649367..3649828 + 153 116253217 - RL3475 - putative acetyltransferase 3448 55.45 -1 3649860..3650171 - 103 116253218 clpS RL3476 - ATP-dependent Clp protease adaptor 3449 55.64 -1 3650267..3650665 - 132 116253219 - RL3477 - hypothetical protein 3450 58.06 -1 3650655..3650933 - 92 116253220 - RL3478 - hypothetical protein 3451 62.19 0 3651075..3652190 + 371 116253221 - RL3479 - translation-associated GTPase 3452 63.70 0 3652359..3653471 - 370 116253222 - RL3480 - putative transmembrane protein 3453 62.60 0 3653553..3654044 + 163 116253223 - RL3481 - putative MaoC family protein 3454 61.97 0 3654061..3654528 + 155 116253224 - RL3482 - putative MaoC family protein 3455 63.90 0 3654553..3655095 - 180 116253225 apt RL3483 - adenine phosphoribosyltransferase 3456 61.24 0 3655211..3656095 - 294 116253226 petC RL3484 - putative cytochrome c1 precursor 3457 59.26 0 3656121..3657389 - 422 116253227 petB RL3485 - putative cytochrome b 3458 60.71 0 3657404..3657991 - 195 116253228 petA RL3486 - putative ubiquinol-cytochrome c reductase iron-sulfur subunit 3459 57.88 -1 3658266..3659198 + 310 116253229 - RL3487 - putative transmembrane exo/endo phosphatase family protein 3460 62.33 0 3659154..3661067 - 637 116253230 - RL3488 - putative ATP-binding component of ABC transporter 3461 61.56 0 3661167..3661460 + 97 116253231 - RL3489 - hypothetical protein 3462 62.04 0 3661573..3663429 - 618 116253232 - RL3490 - putative ATP-binding component of ABC transporter 3463 65.15 +1 3663815..3664276 + 153 116253233 - RL3491 - putative aminotransferase/methyltransferase 3464 63.75 0 3664492..3666138 + 548 116253234 - RL3492 - putative transmembrane transporter 3465 59.39 0 3666142..3666402 - 86 116253235 - RL3493 - hypothetical protein 3466 61.62 0 3666581..3667492 + 303 116253236 hemF RL3494 - coproporphyrinogen III oxidase 3467 58.75 0 3667563..3667865 + 100 116253237 - RL3495 - hypothetical protein 3468 64.11 0 3668166..3669419 - 417 116253238 papS RL3496 - putative poly(A) polymerase 3469 62.52 0 3669416..3670066 - 216 116253239 - RL3497 - putative NUDIX/MutT family protein 3470 61.38 0 3670063..3670686 - 207 116253240 - RL3498 - hypothetical protein 3471 64.89 +1 3670845..3671855 + 336 116253241 - RL3499 - hypothetical protein 3472 66.56 +1 3671869..3672789 + 306 116253242 - RL3500 - hypothetical protein 3473 64.32 0 3672786..3675599 + 937 116253243 - RL3501 - putative transmembrane protein 3474 64.35 0 3675601..3677670 + 689 116253244 - RL3502 - putative transmembrane protein 61.51 MEAN 3.25 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0