version 1.0
Rhizobium etli CIAT 652, complete genome - 1..4513324 4343 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4058 62.18 0 4202917..4203852 + 311 190893697 argI RHECIAT_CH0004132 - arginase protein 4059 62.67 0 4203892..4205091 + 399 190893698 rocD RHECIAT_CH0004133 - ornithine aminotransferase protein 4060 59.33 0 4205289..4205765 + 158 190893699 cheW5 RHECIAT_CH0004134 - chemotaxis signal transduction protein 4061 60.87 0 4206055..4207815 + 586 190893700 mcpAch2 RHECIAT_CH0004135 - methyl-accepting chemotaxis protein 4062 54.88 -1 4208448..4208693 - 81 190893701 fdsD RHECIAT_CH0004136 - formate dehydrogenase protein, delta subunit 4063 65.82 +1 4208683..4209510 - 275 190893702 fdsC RHECIAT_CH0004137 - formate dehydrogenase protein, C subunit 4064 62.71 0 4209575..4212454 - 959 190893703 fdsA RHECIAT_CH0004138 - formate dehydrogenase protein, alpha subunit 4065 64.74 0 4212524..4214080 - 518 190893704 fdsB RHECIAT_CH0004139 - formate dehydrogenase protein, beta subunit 4066 64.17 0 4214077..4214556 - 159 190893705 fdsG RHECIAT_CH0004140 - formate dehydrogenase protein, gamma subunit 4067 61.74 0 4214691..4215584 - 297 190893706 - RHECIAT_CH0004141 - probable transcriptional regulator protein, LysR family 4068 56.43 -1 4215660..4216001 - 113 190893707 - RHECIAT_CH0004142 - probable transcriptional regulator protein, ArsR family 4069 62.55 0 4216106..4216930 - 274 190893708 - RHECIAT_CH0004143 - putative oxidoreductase protein 4070 64.33 0 4216997..4217467 - 156 190893709 soxR RHECIAT_CH0004144 - redox-sensitive transcriptional regulator-activator protein 4071 62.70 0 4218122..4218928 + 268 190893710 - RHECIAT_CH0004145 - putative nitrate/sulfonate/bicarbonate ABC transporter, permease protein 4072 64.23 0 4218925..4219704 + 259 190893711 - RHECIAT_CH0004146 - putative nitrate/sulfonate/bicarbonate ABC transporter, ATP-binding protein 4073 61.92 0 4219805..4220815 + 336 190893712 - RHECIAT_CH0004147 - putative nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding protein 4074 62.90 0 4220904..4222124 + 406 190893713 - RHECIAT_CH0004148 - putative acyltransferase protein 4075 60.30 0 4222291..4223028 + 245 190893714 pssAch3 RHECIAT_CH0004149 - exopolysaccharide production CDP-diacylglycerol-serine O-phosphatidyltransferase protein 4076 59.07 0 4223246..4223653 - 135 190893715 atpC RHECIAT_CH0004150 - ATP synthase protein, epsilon subunit 4077 61.83 0 4223892..4225319 - 475 190893716 atpD RHECIAT_CH0004151 - H(+)-transporting ATP synthase protein, beta subunit 4078 60.56 0 4225342..4226226 - 294 190893717 atpG RHECIAT_CH0004152 - H(+)-transporting ATP synthase protein, gamma subunit 4079 62.94 0 4226253..4227782 - 509 190893718 atpA RHECIAT_CH0004153 - H(+)-transporting ATP synthase protein, alpha subunit 4080 55.84 -1 4227782..4228483 - 233 190893719 atpH RHECIAT_CH0004154 - H(+)-transporting ATP synthase protein, delta subunit 4081 60.51 0 4228602..4228991 - 129 190893720 - RHECIAT_CH0004155 - hypothetical protein 4082 66.40 +1 4229071..4231287 - 738 190893721 priA RHECIAT_CH0004156 - primosomal protein N' (replication factor Y) protein 4083 64.20 0 4231475..4232407 + 310 190893722 - RHECIAT_CH0004157 - probable dihydrodipicolinate synthase protein 4084 61.32 0 4232404..4234029 + 541 190893723 - RHECIAT_CH0004158 - putative glucose-methanol-choline oxidoreductase protein 4085 61.67 0 4234051..4234530 - 159 190893724 - RHECIAT_CH0004159 - putative acetyltransferase protein, GNAT family 4086 59.49 0 4234547..4235479 - 310 190893725 - RHECIAT_CH0004160 - putative acyltransferase protein 4087 66.35 +1 4235637..4236572 + 311 190893726 xerC RHECIAT_CH0004161 - tyrosine site-specific integrase/recombinase protein 4088 63.88 0 4236735..4237811 + 358 190893727 - RHECIAT_CH0004162 - hypothetical protein 4089 60.68 0 4237890..4238390 - 166 190893728 - RHECIAT_CH0004163 - probable cytochrome B561 protein 4090 62.83 0 4238493..4239899 - 468 190893729 lpdA2 RHECIAT_CH0004164 - dihydrolipoamide dehydrogenase protein 4091 65.47 +1 4240018..4240770 - 250 190893730 - RHECIAT_CH0004165 - putative oxidoreductase protein 4092 64.22 0 4240767..4241297 - 176 190893731 - RHECIAT_CH0004166 - hypothetical protein 4093 64.53 0 4241294..4242043 - 249 190893732 - RHECIAT_CH0004167 - hypothetical protein 4094 64.06 0 4242055..4243320 - 421 190893733 sucB RHECIAT_CH0004168 - dihydrolipoamide S-succinyltransferase protein 4095 63.75 0 4243361..4243669 - 102 190893734 - RHECIAT_CH0004169 - hypothetical protein 4096 61.98 0 4243686..4246670 - 994 190893735 sucA RHECIAT_CH0004170 - oxoglutarate dehydrogenase E1 protein 4097 63.79 0 4246839..4247741 - 300 190893736 sucD RHECIAT_CH0004171 - succinyl-CoA synthetase protein, alpha subunit 4098 60.37 0 4247755..4248246 - 163 190893737 - RHECIAT_CH0004172 - hypothetical protein 4099 61.31 0 4248255..4249448 - 397 190893738 sucC RHECIAT_CH0004173 - succinyl-CoA synthetase protein, beta subunit 4100 62.72 0 4249484..4250446 - 320 190893739 mdh RHECIAT_CH0004174 - malate dehydrogenase protein 4101 59.11 0 4250621..4251784 - 387 190893740 - RHECIAT_CH0004175 - putative ATP-binding protein 4102 65.50 +1 4251850..4252365 - 171 190893741 omp2 RHECIAT_CH0004176 - outer membrane lipoprotein 4103 57.58 -1 4252502..4252798 - 98 190893742 - RHECIAT_CH0004177 - hypothetical protein 4104 61.15 0 4253325..4254104 - 259 190893743 sdhB RHECIAT_CH0004178 - succinate dehydrogenase protein, iron-sulfur subunit 4105 64.98 0 4254457..4256298 - 613 190893744 sdhA RHECIAT_CH0004179 - succinate dehydrogenase protein, flavoprotein subunit 4106 58.53 0 4256306..4256686 - 126 190893745 sdhD RHECIAT_CH0004180 - succinate dehydrogenase protein, membrane anchor subunit 4107 58.84 0 4256697..4257092 - 131 190893746 sdhC RHECIAT_CH0004181 - succinate dehydrogenase protein, cytochrome b subunit 4108 64.30 0 4257510..4258016 + 168 190893747 - RHECIAT_CH0004182 - hypothetical protein 4109 63.00 0 4258013..4258666 - 217 190893748 - RHECIAT_CH0004183 - putative methyltransferase protein 4110 59.95 0 4258663..4259094 - 143 190893749 - RHECIAT_CH0004184 - hypothetical protein 4111 58.84 0 4259097..4259390 - 97 190893750 - RHECIAT_CH0004185 - hypothetical protein 4112 64.84 0 4259401..4260384 - 327 190893751 gpsA RHECIAT_CH0004186 - glycerol-3-phosphate dehydrogenase (NAD(P)+) protein 4113 65.66 +1 4260381..4261478 - 365 190893752 gcp RHECIAT_CH0004187 - O-sialoglycoprotein endopeptidase protein 4114 66.77 +1 4261551..4262480 + 309 190893753 hemC RHECIAT_CH0004188 - porphobilinogen deaminase protein 4115 64.83 0 4262488..4263195 + 235 190893754 hemD RHECIAT_CH0004189 - uroporphyrinogen-III synthase protein 4116 66.83 +1 4263285..4264535 + 416 190893755 - RHECIAT_CH0004190 - hypothetical protein 4117 67.97 +1 4264540..4266147 + 535 190893756 - RHECIAT_CH0004191 - hypothetical conserved membrane protein 4118 59.05 0 4266165..4266650 + 161 190893757 - RHECIAT_CH0004192 - hypothetical protein 4119 63.23 0 4266637..4267392 + 251 190893758 guaA2 RHECIAT_CH0004193 - GMP synthase (glutamine-hydrolyzing) protein 4120 63.50 0 4267531..4268763 - 410 190893759 - RHECIAT_CH0004194 - putative permease protein 4121 51.40 -2 4268873..4269193 + 106 190893760 - RHECIAT_CH0004195 - hypothetical conserved membrane protein 4122 57.69 -1 4269190..4269501 + 103 190893761 - RHECIAT_CH0004196 - hypothetical protein 4123 59.59 0 4269506..4270042 - 178 190893762 ppa RHECIAT_CH0004197 - pyrophosphate phospho-hydrolase protein 4124 60.16 0 4270192..4270698 - 168 190893763 - RHECIAT_CH0004198 - putative acetyltransferase protein 4125 60.85 0 4270954..4272774 - 606 190893764 typA RHECIAT_CH0004199 - GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A) protein 4126 61.78 0 4272932..4275019 - 695 190893765 dcp RHECIAT_CH0004200 - peptidyl-dipeptidase protein 4127 53.47 -2 4275248..4275679 + 143 190893766 - RHECIAT_CH0004201 - hypothetical protein 4128 65.73 +1 4275681..4276322 - 213 190893767 - RHECIAT_CH0004202 - putative amino acid efflux protein 4129 61.73 0 4276456..4277124 - 222 190893768 - RHECIAT_CH0004203 - putative hydrolase MutT/nudix family protein 4130 64.44 0 4277291..4278187 + 298 190893769 - RHECIAT_CH0004204 - hypothetical protein 4131 63.28 0 4278245..4279456 + 403 190893770 - RHECIAT_CH0004205 - putative adenylosuccinate synthase protein 4132 57.58 -1 4279512..4280810 - 432 190893771 - RHECIAT_CH0004206 - putative mechanosensitive ion channel family protein 4133 62.25 0 4281153..4282376 - 407 190893772 argG2 RHECIAT_CH0004207 - argininosuccinate synthase protein 4134 61.63 0 4282533..4283405 + 290 190893773 - RHECIAT_CH0004208 - probable oxidoreductase protein 4135 62.15 0 4283566..4284207 + 213 190893774 - RHECIAT_CH0004209 - putative amino acid efflux protein, LysE family 4136 64.15 0 4284286..4285080 - 264 190893775 - RHECIAT_CH0004210 - putative ABC transporter, ATP-binding protein 4137 63.59 0 4285077..4285955 - 292 190893776 - RHECIAT_CH0004211 - putative sugar ABC transporter, permease protein 4138 64.26 0 4286077..4287030 - 317 190893777 - RHECIAT_CH0004212 - putative ABC transporter, substrate-binding protein 4139 61.79 0 4287124..4288353 - 409 190893778 - RHECIAT_CH0004213 - hypothetical protein 4140 59.06 0 4288603..4289115 - 170 190893779 - RHECIAT_CH0004214 - hypothetical protein 4141 63.28 0 4289452..4290012 + 186 190893780 - RHECIAT_CH0004215 - probable RNA polymerase sigma factor protein (sigma-70), ECF family 4142 64.38 0 4290029..4290421 - 130 190893781 - RHECIAT_CH0004216 - hypothetical protein 4143 58.70 0 4290515..4290853 - 112 190893782 pcbD RHECIAT_CH0004217 - pterin-4-alpha-carbinolamine dehydratase protein 4144 59.88 0 4290856..4291356 + 166 190893783 - RHECIAT_CH0004218 - probable tyrosine phosphatase protein 4145 62.46 0 4291263..4291856 - 197 190893784 ligT RHECIAT_CH0004219 - 2'-5' RNA ligase protein 4146 60.62 0 4291925..4292569 - 214 190893785 - RHECIAT_CH0004220 - probable acyl-CoA thioesterase protein 4147 64.12 0 4292642..4293349 + 235 190893786 - RHECIAT_CH0004221 - putative ABC transporter, ATP-binding protein (involved in lysophospholipase L1 biosynthesis) 4148 66.04 +1 4293352..4295889 + 845 190893787 - RHECIAT_CH0004222 - putative ABC transporter, permease protein (involved in lysophospholipase L1 biosynthesis) 4149 58.16 -1 4296069..4296797 + 242 190893788 - RHECIAT_CH0004223 - hypothetical conserved membrane protein 4150 62.72 0 4296906..4297463 + 185 190893789 - RHECIAT_CH0004224 - putative phosphinothricin N-acetyltransferase (antibiotic resistance) protein 4151 55.47 -1 4297525..4297926 - 133 190893790 - RHECIAT_CH0004225 - hypothetical protein 4152 60.19 0 4298217..4298957 - 246 190893791 - RHECIAT_CH0004226 - hypothetical protein 4153 61.65 0 4299192..4301882 - 896 190893792 acnA RHECIAT_CH0004227 - aconitate hydratase protein 4154 60.03 0 4302145..4302792 + 215 190893793 ccmA RHECIAT_CH0004228 - heme ABC transporter, ATP-binding protein (involved in cytochrome c biogenesis) 4155 66.82 +1 4302789..4303448 + 219 190893794 ccmB RHECIAT_CH0004229 - heme ABC transporter, permease protein (involved in cytochrome c biogenesis) 4156 64.04 0 4303496..4304257 + 253 190893795 ccmC RHECIAT_CH0004230 - heme ABC transporter, permease protein (involved in cytochrome c biogenesis) 4157 71.43 +2 4304261..4304428 + 55 190893796 - RHECIAT_CH0004231 - probable heme transporter protein (involved in cytochrome c biogenesis) 61.82 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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