version 1.0
Rhizobium etli CIAT 652, complete genome - 1..4513324 4343 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3758 65.50 +1 3862937..3863791 - 284 190893397 - RHECIAT_CH0003823 - probable transcriptional regulator protein, LysR family 3759 62.39 0 3863886..3864890 + 334 190893398 - RHECIAT_CH0003824 - putative Na+/bile acid cotransporter protein 3760 60.93 0 3864967..3865437 - 156 190893399 ibpA RHECIAT_CH0003825 - molecular chaperone small heat shock protein 3761 62.67 0 3865860..3866834 + 324 190893400 pldB RHECIAT_CH0003826 - lysophospholipase protein 3762 64.47 0 3866916..3867689 - 257 190893401 - RHECIAT_CH0003827 - probable inositol monophosphatase protein 3763 51.73 -2 3868021..3868830 - 269 190893402 - RHECIAT_CH0003828 - hypothetical protein 3764 55.45 -1 3869681..3870001 - 106 190893403 - RHECIAT_CH0003829 - hypothetical protein 3765 55.07 -1 3870193..3870606 - 137 190893404 - RHECIAT_CH0003830 - hypothetical protein 3766 56.04 -1 3870603..3871082 - 159 190893405 - RHECIAT_CH0003831 - hypothetical protein 3767 59.38 0 3871199..3872530 - 443 190893406 - RHECIAT_CH0003832 - hypothetical protein 3768 63.54 0 3872614..3872997 - 127 190893407 - RHECIAT_CH0003833 - hypothetical protein 3769 57.80 -1 3873538..3875973 - 811 190893408 - RHECIAT_CH0003834 - hypothetical protein 3770 54.97 -1 3875970..3876542 - 190 190893409 - RHECIAT_CH0003835 - hypothetical protein 3771 57.38 -1 3876539..3876721 - 60 190893410 - RHECIAT_CH0003836 - hypothetical protein 3772 63.27 0 3878573..3879454 - 293 190893411 - RHECIAT_CH0003837 - probable N-formylglutamate amidohydrolase protein 3773 58.40 0 3879643..3880005 + 120 190893412 - RHECIAT_CH0003838 - probable two-component response regulator protein 3774 62.31 0 3880649..3880969 + 106 190893413 - RHECIAT_CH0003840 - hypothetical protein 3775 60.54 0 3881247..3882290 + 347 190893414 ropAch3 RHECIAT_CH0003841 - porin outer membrane protein 3776 64.04 0 3882672..3883166 + 164 190893415 - RHECIAT_CH0003842 - hypothetical protein 3777 69.75 +2 3883173..3883886 - 237 190893416 - RHECIAT_CH0003843 - hypothetical protein 3778 58.89 0 3884190..3884369 - 59 190893417 - RHECIAT_CH0003844 - hypothetical protein 3779 60.17 0 3884432..3884662 - 76 190893418 - RHECIAT_CH0003845 - hypothetical protein 3780 61.97 0 3884928..3886097 + 389 190893419 - RHECIAT_CH0003846 - hypothetical protein 3781 62.70 0 3886145..3886396 - 83 190893420 - RHECIAT_CH0003847 - hypothetical protein 3782 65.68 +1 3886486..3888003 - 505 190893421 - RHECIAT_CH0003848 - hypothetical conserved membrane protein 3783 62.40 0 3888090..3888581 - 163 190893422 - RHECIAT_CH0003849 - hypothetical protein 3784 63.70 0 3888578..3889522 - 314 190893423 - RHECIAT_CH0003850 - hypothetical protein 3785 64.12 0 3889778..3890917 - 379 190893424 - RHECIAT_CH0003851 - probable iron ABC transporter, substrate-binding protein 3786 50.51 -2 3890956..3891153 + 65 190893425 - RHECIAT_CH0003852 - hypothetical protein 3787 61.96 0 3891194..3893062 + 622 190893426 cyaF2 RHECIAT_CH0003853 - adenylate cyclase protein 3788 63.57 0 3894328..3895005 + 225 190893427 - RHECIAT_CH0003854 - probable two-component response regulator protein 3789 66.31 +1 3895002..3896384 + 460 190893428 - RHECIAT_CH0003855 - probable two-component sensor histidine kinase protein 3790 64.23 0 3896495..3899818 + 1107 190893429 - RHECIAT_CH0003856 - putative transglutaminase-like protein 3791 65.92 +1 3899866..3902283 + 805 190893430 - RHECIAT_CH0003857 - hypothetical protein 3792 63.39 0 3902313..3903167 + 284 190893431 - RHECIAT_CH0003858 - putative transglutaminase-like protein 3793 58.07 -1 3903287..3904519 + 410 190893432 - RHECIAT_CH0003859 - hypothetical protein 3794 42.59 -2 3904576..3904737 + 53 190893433 - RHECIAT_CH0003860 - hypothetical protein 3795 62.24 0 3904786..3907248 + 820 190893434 glgP RHECIAT_CH0003861 - glycogen phosphorylase protein 3796 61.32 0 3907245..3909452 + 735 190893435 glgBch RHECIAT_CH0003862 - 1,4-alpha-glucan branching enzyme (alpha amylase protein) 3797 60.41 0 3909471..3910733 + 420 190893436 glgC RHECIAT_CH0003863 - glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) protein 3798 61.95 0 3910737..3912179 + 480 190893437 glgA RHECIAT_CH0003864 - glycogen synthase (starch [bacterial glycogen] synthase) protein 3799 62.19 0 3912186..3913817 + 543 190893438 pgm RHECIAT_CH0003865 - phosphoglucomutase protein 3800 63.64 0 3913830..3915809 + 659 190893439 glgXch RHECIAT_CH0003866 - glycosyl hydrolase (glycogen debranching) protein 3801 62.17 0 3915902..3916390 + 162 190893440 nodN RHECIAT_CH0003867 - dehydratase nodulation protein 3802 61.94 0 3916403..3916804 - 133 190893441 - RHECIAT_CH0003868 - probable glyoxylase protein 3803 65.39 +1 3916853..3917401 - 182 190893442 soxGch RHECIAT_CH0003869 - sarcosine oxidase protein, gamma subunit 3804 64.60 0 3917394..3920387 - 997 190893443 soxAch RHECIAT_CH0003870 - sarcosine oxidase protein, alpha subunit 3805 60.23 0 3920384..3920725 - 113 190893444 soxDch RHECIAT_CH0003871 - sarcosine oxidase protein, delta subunit 3806 63.16 0 3920835..3922088 - 417 190893445 soxBch RHECIAT_CH0003872 - sarcosine oxidase protein, beta subunit 3807 62.56 0 3922353..3923399 + 348 190893446 - RHECIAT_CH0003873 - hypothetical protein 3808 63.31 0 3923406..3925580 - 724 190893447 cyaD RHECIAT_CH0003874 - adenylate cyclase protein 3809 60.96 0 3925877..3927487 + 536 190893448 cyaB2 RHECIAT_CH0003875 - adenylate cyclase protein 3810 60.56 0 3927644..3927856 + 70 190893449 rpsU2 RHECIAT_CH0003876 - 30S ribosomal protein S21 3811 61.01 0 3927991..3928857 + 288 190893450 - RHECIAT_CH0003877 - probable O-linked GlcNAc transferase protein 3812 63.94 0 3929245..3930897 + 550 190893451 - RHECIAT_CH0003878 - putative two-component sensor histidine kinase protein 3813 63.77 0 3931049..3931531 + 160 190893452 - RHECIAT_CH0003879 - hypothetical protein 3814 62.15 0 3931634..3933028 - 464 190893453 pntB RHECIAT_CH0003880 - NAD(P)(+) transhydrogenase (AB-specific) protein, beta subunit 3815 62.66 0 3933036..3933434 - 132 190893454 pntA1 RHECIAT_CH0003881 - NAD(P)(+) transhydrogenase (AB-specific) protein, alpha subunit 3816 64.79 0 3933434..3934657 - 407 190893455 pntA2 RHECIAT_CH0003882 - NAD(P)(+) transhydrogenase (AB-specific) protein, alpha subunit 3817 56.46 -1 3934788..3935120 - 110 190893456 - RHECIAT_CH0003883 - putative cytochrome c oxidase protein 3818 59.60 0 3935314..3936006 - 230 190893457 - RHECIAT_CH0003884 - hypothetical protein 3819 60.87 0 3936246..3938627 - 793 190893458 - RHECIAT_CH0003885 - putative sensory box/GGDEF family protein 3820 56.67 -1 3938953..3939492 + 179 190893459 - RHECIAT_CH0003886 - putative TRAP mannitol/C4-dicarboxylate transporter, permease protein 3821 63.79 0 3939544..3941001 + 485 190893460 - RHECIAT_CH0003887 - putative TRAP mannitol/C4-dicarboxylate transporter, permease protein 3822 59.98 0 3941087..3942193 - 368 190893461 - RHECIAT_CH0003888 - probable TRAP mannitol/C4-dicarboxylate transporter, substrate-binding protein 3823 65.90 +1 3942485..3943264 + 259 190893462 - RHECIAT_CH0003889 - probable glutamine amidotransferase protein 3824 63.77 0 3943380..3944345 - 321 190893463 - RHECIAT_CH0003890 - probable oxidoreductase/dehydrogenase protein 3825 64.56 0 3944374..3945417 - 347 190893464 - RHECIAT_CH0003891 - probable transcriptional regulator protein, LacI family 3826 62.43 0 3945515..3946033 - 172 190893465 - RHECIAT_CH0003892 - probable transcriptional regulator protein, MarR family 3827 63.72 0 3946113..3946892 + 259 190893466 - RHECIAT_CH0003893 - putative creatininase protein 3828 61.02 0 3947041..3948138 + 365 190893467 - RHECIAT_CH0003894 - putative cobalamin synthesis protein, P47K family 3829 64.14 0 3948138..3949127 + 329 190893468 - RHECIAT_CH0003895 - hypothetical protein 3830 66.18 +1 3949347..3950165 + 272 190893469 cysE2 RHECIAT_CH0003896 - serine acetyltransferase protein 3831 61.90 0 3950307..3951461 - 384 190893470 - RHECIAT_CH0003897 - putative sensory box/GGDEF family protein 3832 65.82 +1 3951711..3952301 - 196 190893471 - RHECIAT_CH0003898 - putative acetyltransferase protein 3833 62.52 0 3952396..3953529 - 377 190893472 - RHECIAT_CH0003899 - probable ornithine decarboxylase protein 3834 59.96 0 3954059..3954952 + 297 190893473 - RHECIAT_CH0003900 - probable transcriptional regulator protein, LysR family 3835 57.94 -1 3955083..3955724 + 213 190893474 - RHECIAT_CH0003901 - hypothetical protein 3836 65.55 +1 3955718..3956794 + 358 190893475 - RHECIAT_CH0003902 - putative ABC transporter, permease protein 3837 60.00 0 3956809..3957018 - 69 190893476 - RHECIAT_CH0003903 - hypothetical protein 3838 59.48 0 3957015..3957710 - 231 190893477 - RHECIAT_CH0003904 - probable acetyltransferase protein 3839 64.31 0 3957775..3958494 - 239 190893478 - RHECIAT_CH0003905 - hypothetical protein 3840 66.04 +1 3958591..3959229 - 212 190893479 eda RHECIAT_CH0003906 - 2-dehydro-3-deoxyphosphogluconate aldolase protein 3841 58.82 0 3959313..3959873 + 186 190893480 - RHECIAT_CH0003907 - putative adenylate cyclase protein 3842 63.70 0 3959851..3960759 + 302 190893481 - RHECIAT_CH0003908 - putative adenylate cyclase protein 3843 60.18 0 3960759..3961745 + 328 190893482 - RHECIAT_CH0003909 - probable rhodanese-related sulfurtransferase protein 3844 62.60 0 3961789..3964002 - 737 190893483 - RHECIAT_CH0003910 - putative sensory box/GGDEF family protein (nitrogen fixation positive activator protein-like protein) 3845 61.96 0 3964136..3965515 - 459 190893484 bglSch RHECIAT_CH0003911 - beta-glucosidase protein 3846 61.94 0 3965781..3966182 + 133 190893485 - RHECIAT_CH0003912 - hypothetical conserved membrane protein 3847 63.89 0 3966268..3967455 - 395 190893486 - RHECIAT_CH0003913 - probable oxidoreductase protein 3848 61.25 0 3967692..3968744 - 350 190893487 - RHECIAT_CH0003914 - putative xylose isomerase domain protein 3849 60.86 0 3968992..3969939 - 315 190893488 - RHECIAT_CH0003915 - probable sugar ABC transporter, substrate-binding protein 3850 61.09 0 3970027..3971031 - 334 190893489 - RHECIAT_CH0003916 - probable sugar ABC transporter, permease protein 3851 60.64 0 3971164..3972690 - 508 190893490 - RHECIAT_CH0003917 - probable sugar ABC transporter, ATP-binding protein 3852 63.57 0 3972964..3973995 + 343 190893491 - RHECIAT_CH0003918 - probable transcriptional regulator protein, LacI family 3853 60.79 0 3974059..3975369 - 436 190893492 xylA RHECIAT_CH0003919 - xylose isomerase protein 3854 65.91 +1 3975586..3977040 - 484 190893493 xylB RHECIAT_CH0003920 - xylulose kinase protein 3855 64.33 0 3977059..3978087 - 342 190893494 - RHECIAT_CH0003921 - probable transcriptional regulator protein, LacI family 3856 60.54 0 3978294..3979892 - 532 190893495 - RHECIAT_CH0003922 - probable multidrug efflux transporter, permease protein 3857 62.80 0 3980018..3981232 - 404 190893496 - RHECIAT_CH0003923 - putative protein secretion protein, HlyD family 61.82 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0