version 1.0
Rhizobium etli CIAT 652, complete genome - 1..4513324 4343 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3064 64.26 0 3121087..3122952 - 621 190892703 recQ RHECIAT_CH0003119 - ATP-dependent DNA helicase protein 3065 64.52 0 3122952..3124952 - 666 190892704 dnaG RHECIAT_CH0003120 - DNA primase protein 3066 55.93 -1 3125111..3125464 - 117 190892705 - RHECIAT_CH0003121 - hypothetical protein 3067 63.18 0 3125624..3126511 + 295 190892706 - RHECIAT_CH0003122 - hypothetical protein 3068 60.49 0 3126614..3127066 - 150 190892707 - RHECIAT_CH0003123 - hypothetical protein 3069 63.02 0 3127337..3128542 + 401 190892708 carA RHECIAT_CH0003124 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) protein, small chain 3070 62.34 0 3128716..3129825 - 369 190892709 - RHECIAT_CH0003125 - putative sulfite oxidase protein 3071 60.90 0 3130219..3131535 + 438 190892710 - RHECIAT_CH0003126 - hypothetical protein 3072 60.12 0 3131999..3132319 + 106 190892711 - RHECIAT_CH0003127 - hypothetical protein 3073 64.03 0 3132338..3133741 - 467 190892712 - RHECIAT_CH0003128 - probable multidrug efflux protein 3074 64.90 0 3133887..3135131 - 414 190892713 - RHECIAT_CH0003129 - probable transporter, permease protein 3075 64.25 0 3135465..3136457 + 330 190892714 - RHECIAT_CH0003130 - putative oxidoreductase protein 3076 62.65 0 3136667..3137587 - 306 190892715 - RHECIAT_CH0003131 - probable zinc protease protein 3077 66.28 +1 3138072..3139100 + 342 190892716 - RHECIAT_CH0003132 - probable L-iditol 2-dehydrogenase protein 3078 63.89 0 3139271..3142759 + 1162 190892717 carB RHECIAT_CH0003133 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) protein, large chain 3079 64.33 0 3142875..3144329 - 484 190892718 - RHECIAT_CH0003134 - putative uracil DNA glycosylase protein 3080 60.42 0 3144329..3145561 - 410 190892719 - RHECIAT_CH0003135 - hypothetical protein 3081 61.43 0 3145826..3146302 + 158 190892720 greA RHECIAT_CH0003136 - transcription elongation factor (transcript cleavage factor) protein 3082 66.10 +1 3146338..3147387 + 349 190892721 lpcC RHECIAT_CH0003137 - lipopolysaccharide core biosynthesis mannosyltransferase protein 3083 63.07 0 3147737..3149071 - 444 190892722 dctA RHECIAT_CH0003138 - C4-dicarboxylate transporter protein 3084 64.46 0 3149312..3151171 + 619 190892723 dctB RHECIAT_CH0003139 - two-component sensor histidine kinase protein regulating C4-dicarboxylate transport system 3085 65.03 0 3151176..3152522 + 448 190892724 dctD RHECIAT_CH0003140 - two-component response regulator protein regulating C4-dicarboxylate transport system 3086 60.23 0 3152524..3153051 - 175 190892725 lrp RHECIAT_CH0003141 - leucine-responsive transcriptional regulator protein, AsnC family 3087 63.69 0 3153223..3154197 + 324 190892726 trxB RHECIAT_CH0003142 - thioredoxin reductase (NADPH) protein 3088 60.54 0 3154220..3155116 + 298 190892727 - RHECIAT_CH0003143 - probable transcriptional regulator protein, LysR family 3089 56.41 -1 3155652..3155963 + 103 190892728 - RHECIAT_CH0003144 - probable transcriptional regulator protein, ArsR family 3090 62.39 0 3155999..3157213 + 404 190892729 nerA RHECIAT_CH0003145 - glycerol trinitrate reductase protein 3091 61.92 0 3157291..3158091 + 266 190892730 str RHECIAT_CH0003146 - antibiotic resistance (streptomycin kinase) protein 3092 64.91 0 3158088..3159113 - 341 190892731 - RHECIAT_CH0003147 - hypothetical protein 3093 62.47 0 3159208..3160113 + 301 190892732 - RHECIAT_CH0003148 - probable transcriptional regulator protein, LysR family 3094 58.33 -1 3160375..3160890 + 171 190892733 - RHECIAT_CH0003149 - hypothetical protein 3095 65.25 0 3160893..3161174 - 93 190892734 - RHECIAT_CH0003150 - hypothetical protein 3096 60.38 0 3161406..3162503 + 365 190892735 chaA RHECIAT_CH0003151 - LPS-associated cation exporter (Ca2+/H+ antiporter) protein 3097 58.85 0 3162513..3163382 - 289 190892736 lpcB RHECIAT_CH0003152 - 3-deoxy-manno-octulosonate cytidylyltransferase protein 3098 63.44 0 3163428..3164294 - 288 190892737 lpcA RHECIAT_CH0003153 - galactosyltransferase protein 3099 61.35 0 3164595..3165797 - 400 190892738 aatAch RHECIAT_CH0003154 - aspartate aminotransferase protein 3100 61.14 0 3166060..3167706 + 548 190892739 - RHECIAT_CH0003155 - putative glycosyltransferase protein 3101 64.36 0 3167963..3170347 + 794 190892740 - RHECIAT_CH0003156 - putative vault protein inter-alpha-trypsin domain 3102 64.47 0 3170337..3171110 + 257 190892741 - RHECIAT_CH0003157 - putative sortase-like protein 3103 63.07 0 3171172..3172311 + 379 190892742 - RHECIAT_CH0003158 - putative glucose dehydrogenase B protein 3104 60.34 0 3172316..3172789 - 157 190892743 - RHECIAT_CH0003159 - hypothetical protein 3105 64.09 0 3172889..3173779 + 296 190892744 - RHECIAT_CH0003160 - putative transporter protein 3106 47.78 -2 3173798..3174067 + 89 190892745 - RHECIAT_CH0003161 - hypothetical protein 3107 58.80 0 3174266..3174481 + 71 190892746 cspA5 RHECIAT_CH0003162 - cold shock protein 3108 63.20 0 3174631..3175092 + 153 190892747 - RHECIAT_CH0003163 - hypothetical protein 3109 67.12 +1 3175152..3176024 - 290 190892748 - RHECIAT_CH0003164 - putative 3-oxoacyl-[acyl-carrier-protein] reductase protein 3110 61.22 0 3176042..3176518 + 158 190892749 - RHECIAT_CH0003165 - putative transcriptional regulator protein 3111 61.29 0 3176612..3177988 - 458 190892750 - RHECIAT_CH0003166 - probable two-component sensor histidine kinase protein 3112 62.39 0 3178066..3178767 - 233 190892751 - RHECIAT_CH0003167 - probable two-component response regulator protein 3113 57.53 -1 3178768..3179205 - 145 190892752 - RHECIAT_CH0003168 - probable transcriptional regulator protein, MarR family 3114 67.41 +1 3179702..3179971 - 89 190892753 - RHECIAT_CH0003169 - hypothetical protein 3115 63.11 0 3180178..3180795 - 205 190892754 - RHECIAT_CH0003170 - hypothetical protein 3116 62.03 0 3181082..3181771 + 229 190892755 - RHECIAT_CH0003171 - putative hydrolase protein 3117 60.23 0 3181787..3182128 - 113 190892756 csaA RHECIAT_CH0003172 - chaperone methionine--tRNA ligase protein 3118 66.79 +1 3182139..3182966 - 275 190892757 proC RHECIAT_CH0003173 - pyrroline-5-carboxylate reductase protein 3119 59.88 0 3182968..3183468 - 166 190892758 - RHECIAT_CH0003174 - hypothetical protein 3120 61.87 0 3183802..3184176 + 124 190892759 - RHECIAT_CH0003175 - hypothetical protein 3121 63.61 0 3184352..3185170 + 272 190892760 lgt RHECIAT_CH0003176 - prolipoprotein diacylglyceryl transferase protein 3122 64.40 0 3185186..3186286 + 366 190892761 - RHECIAT_CH0003177 - hypothetical protein 3123 65.16 0 3186397..3187191 + 264 190892762 - RHECIAT_CH0003178 - hypothetical protein 3124 62.15 0 3187197..3188348 + 383 190892763 - RHECIAT_CH0003179 - probable Xaa-Pro dipeptidase protein 3125 67.64 +1 3188451..3189269 + 272 190892764 - RHECIAT_CH0003180 - hypothetical protein 3126 60.99 0 3189375..3190307 + 310 190892765 prsAch RHECIAT_CH0003181 - ribose-phosphate pyrophosphokinase protein 3127 57.81 -1 3190360..3190551 - 63 190892766 - RHECIAT_CH0003182 - hypothetical protein 3128 57.22 -1 3190678..3192222 - 514 190892767 - RHECIAT_CH0003183 - hypothetical protein 3129 59.97 0 3192622..3193233 + 203 190892768 rplY RHECIAT_CH0003184 - 50S ribosomal protein L25 3130 60.16 0 3193423..3195774 + 783 190892769 - RHECIAT_CH0003185 - putative sensory box/GGDEF family protein 3131 60.64 0 3195799..3196512 + 237 190892770 - RHECIAT_CH0003186 - putative ABC transporter, substrate-binding protein 3132 62.30 0 3196589..3197320 + 243 190892771 pth RHECIAT_CH0003187 - peptidyl-tRNA hydrolase protein 3133 63.42 0 3197317..3197778 + 153 190892772 - RHECIAT_CH0003188 - putative acetyltransferase protein 3134 56.41 -1 3197785..3198096 - 103 190892773 - RHECIAT_CH0003189 - putative ATP-dependent Clp protease adaptor protein 3135 62.77 0 3198426..3199529 + 367 190892774 - RHECIAT_CH0003190 - putative GTP-binding protein 3136 64.19 0 3199549..3200637 - 362 190892775 - RHECIAT_CH0003191 - hypothetical protein 3137 63.10 0 3200819..3201322 + 167 190892776 - RHECIAT_CH0003192 - probable enoyl-CoA hydratase protein 3138 61.75 0 3201319..3201786 + 155 190892777 - RHECIAT_CH0003193 - putative enoyl-CoA hydratase protein 3139 63.90 0 3201810..3202352 - 180 190892778 aptch RHECIAT_CH0003194 - adenine phosphoribosyltransferase protein 3140 61.02 0 3202615..3203499 - 294 190892779 fbcC RHECIAT_CH0003195 - ubiquinol-cytochrome c reductase protein, cytochrome c1 subunit 3141 59.72 0 3203525..3204805 - 426 190892780 fbcB RHECIAT_CH0003196 - ubiquinol-cytochrome c reductase protein, cytochrome b subunit 3142 61.31 0 3204820..3205398 - 192 190892781 fbcF RHECIAT_CH0003197 - ubiquinol-cytochrome c reductase protein, iron-sulfur subunit 3143 59.81 0 3205685..3206617 + 310 190892782 - RHECIAT_CH0003198 - putative endonuclease/exonuclease/phosphatase family protein 3144 62.17 0 3206573..3208486 - 637 190892783 - RHECIAT_CH0003199 - probable ABC transporter, ATP-binding protein 3145 61.04 0 3208648..3208878 + 76 190892784 - RHECIAT_CH0003200 - hypothetical protein 3146 62.41 0 3208970..3210826 - 618 190892785 - RHECIAT_CH0003201 - probable ABC transporter, ATP-binding protein 3147 55.74 -1 3210957..3211139 - 60 190892786 - RHECIAT_CH0003202 - hypothetical protein 3148 62.55 0 3211211..3211672 + 153 190892787 - RHECIAT_CH0003203 - putative tRNA/rRNA aminotransferase/methyltransferase protein 3149 62.30 0 3211867..3213513 + 548 190892788 - RHECIAT_CH0003204 - putative Na+/phosphate transporter protein 3150 59.69 0 3213517..3213774 - 85 190892789 - RHECIAT_CH0003205 - hypothetical protein 3151 62.17 0 3213953..3214864 + 303 190892790 hemF RHECIAT_CH0003206 - coproporphyrinogen III oxidase protein 3152 61.74 0 3214968..3215231 + 87 190892791 - RHECIAT_CH0003207 - hypothetical protein 3153 61.29 0 3215344..3215529 + 61 190892792 - RHECIAT_CH0003208 - hypothetical protein 3154 65.43 +1 3215604..3216737 - 377 190892793 papS RHECIAT_CH0003209 - poly(A) polymerase protein 3155 62.37 0 3216879..3217529 - 216 190892794 - RHECIAT_CH0003210 - probable NTP pyrophosphohydrolase protein, MutT/nudix family 3156 61.86 0 3217526..3218149 - 207 190892795 - RHECIAT_CH0003211 - hypothetical protein 3157 65.67 +1 3218314..3219318 + 334 190892796 - RHECIAT_CH0003212 - putative methanol dehydrogenase regulator MoxR-like protein 3158 66.34 +1 3219332..3220252 + 306 190892797 - RHECIAT_CH0003213 - hypothetical protein 3159 65.28 0 3220249..3223065 + 938 190892798 - RHECIAT_CH0003214 - hypothetical protein 3160 64.11 0 3223067..3225139 + 690 190892799 - RHECIAT_CH0003215 - hypothetical protein 3161 65.71 +1 3225144..3225560 + 138 190892800 - RHECIAT_CH0003216 - putative acetyltransferase protein 3162 63.91 0 3225555..3226061 - 168 190892801 - RHECIAT_CH0003217 - probable acetyltransferase protein 3163 60.89 0 3226660..3227646 + 328 190892802 - RHECIAT_CH0003218 - putative glutathione S-transferase protein 61.82 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0